RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 AKT3Q9Y243 479 aa12.27□□□□□ -0.45
PVT1-216ENST00000523068 NOC2LQ9Y3T9 749 aaKnown RBP12.27□□□□□ -0.45
PVT1-216ENST00000523068 ATG2AQ2TAZ0 1938 aa12.27□□□□□ -0.45
PVT1-216ENST00000523068 SPTBN5Q9NRC6 3674 aaKnown RBP12.26□□□□□ -0.45
PVT1-216ENST00000523068 C5orf67F2Z3F1 127 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 DKC1O60832 514 aaKnown RBP eCLIP12.26□□□□□ -0.458e-7■■■■■ 28.2
PVT1-216ENST00000523068 CTDNEP1O95476 244 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 VTNP04004 478 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 CTNNB1P35222 781 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 KRT2P35908 639 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 BMPR1AP36894 532 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 SARSP49591 514 aaKnown RBP12.26□□□□□ -0.45
PVT1-216ENST00000523068 CDC42EP1Q00587 391 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 TFF2Q03403 129 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 TBC1D8BQ0IIM8 1120 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 ME3Q16798 604 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 KIZQ2M2Z5 673 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 TMEM266Q2M3C6 531 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 XKR3Q5GH77 459 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 B3GNT9Q6UX72 402 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 RTN4RL1Q86UN2 441 aaPredicted RBP12.26□□□□□ -0.45
PVT1-216ENST00000523068 CMTR2Q8IYT2 770 aaKnown RBP12.26□□□□□ -0.45
PVT1-216ENST00000523068 ADAMTS19Q8TE59 1207 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 CLP1Q92989 425 aaKnown RBP12.26□□□□□ -0.45
PVT1-216ENST00000523068 GJA10Q969M2 543 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 OSMRQ99650 979 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 PLVAPQ9BX97 442 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 LMAN2LQ9H0V9 348 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 TMX1Q9H3N1 280 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 CDHR5Q9HBB8 845 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 ST3GAL5Q9UNP4 418 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 PCDHB7Q9Y5E2 793 aa12.26□□□□□ -0.45
PVT1-216ENST00000523068 CUL9Q8IWT3 2517 aa12.25□□□□□ -0.45
PVT1-216ENST00000523068 TNFRSF10AO00220 468 aa12.25□□□□□ -0.45
PVT1-216ENST00000523068 TBX3O15119 743 aa12.25□□□□□ -0.45
PVT1-216ENST00000523068 SLC37A4O43826 429 aa12.25□□□□□ -0.45
PVT1-216ENST00000523068 MARCH6O60337 910 aa12.25□□□□□ -0.45
PVT1-216ENST00000523068 CCNT1O60563 726 aaKnown RBP12.25□□□□□ -0.45
PVT1-216ENST00000523068 GPR32O75388 356 aa12.25□□□□□ -0.45
PVT1-216ENST00000523068 BAG4O95429 457 aaKnown RBP12.25□□□□□ -0.45
PVT1-216ENST00000523068 CLCN3P51790 818 aa12.25□□□□□ -0.45
PVT1-216ENST00000523068 NLRP11P59045 1033 aaKnown RBP12.25□□□□□ -0.45
PVT1-216ENST00000523068 PPP2R5CQ13362 524 aa12.25□□□□□ -0.45
PVT1-216ENST00000523068 TRIM29Q14134 588 aa12.25□□□□□ -0.45
PVT1-216ENST00000523068 UGCGQ16739 394 aa12.25□□□□□ -0.45
PVT1-216ENST00000523068 PIK3AP1Q6ZUJ8 805 aa12.25□□□□□ -0.45
PVT1-216ENST00000523068 SLC24A5Q71RS6 500 aa12.25□□□□□ -0.45
PVT1-216ENST00000523068 CRIPAKQ8N1N5 446 aa12.25□□□□□ -0.45
PVT1-216ENST00000523068 LINC01465Q8N7H1 131 aa12.25□□□□□ -0.45
PVT1-216ENST00000523068 NECAB1Q8N987 351 aa12.25□□□□□ -0.45
PVT1-216ENST00000523068 TMEM40Q8WWA1 233 aa12.25□□□□□ -0.45
PVT1-216ENST00000523068 PPP1R16BQ96T49 567 aa12.25□□□□□ -0.45
PVT1-216ENST00000523068 UHRF1Q96T88 793 aaPredicted RBP12.25□□□□□ -0.45
PVT1-216ENST00000523068 ADAM2Q99965 735 aa12.25□□□□□ -0.45
PVT1-216ENST00000523068 JPH2Q9BR39 696 aaPredicted RBP12.25□□□□□ -0.45
PVT1-216ENST00000523068 NIFKQ9BYG3 293 aaKnown RBP12.25□□□□□ -0.45
PVT1-216ENST00000523068 RNF39Q9H2S5 420 aa12.25□□□□□ -0.45
PVT1-216ENST00000523068 KCNMB3Q9NPA1 279 aa12.25□□□□□ -0.45
PVT1-216ENST00000523068 RGS18Q9NS28 235 aa12.25□□□□□ -0.45
PVT1-216ENST00000523068 SEPT9Q9UHD8 586 aaPredicted RBP12.25□□□□□ -0.45
PVT1-216ENST00000523068 RBM19Q9Y4C8 960 aaKnown RBP12.25□□□□□ -0.45
PVT1-216ENST00000523068 ARID2Q68CP9 1835 aa12.25□□□□□ -0.45
PVT1-216ENST00000523068 BMP1P13497 986 aa12.24□□□□□ -0.45
PVT1-216ENST00000523068 EIF4BP23588 611 aaKnown RBP12.24□□□□□ -0.45
PVT1-216ENST00000523068 ANP32AP39687 249 aaKnown RBP12.24□□□□□ -0.45
PVT1-216ENST00000523068 DNM2P50570 870 aa12.24□□□□□ -0.45
PVT1-216ENST00000523068 PSMC5P62195 406 aa12.24□□□□□ -0.45
PVT1-216ENST00000523068 TARBP2Q15633 366 aaKnown RBP12.24□□□□□ -0.45
PVT1-216ENST00000523068 MTERF2Q49AM1 385 aa12.24□□□□□ -0.45
PVT1-216ENST00000523068 NAALADL2Q58DX5 795 aa12.24□□□□□ -0.45
PVT1-216ENST00000523068 FAM228AQ86W67 206 aa12.24□□□□□ -0.45
PVT1-216ENST00000523068 SLFN12Q8IYM2 578 aa12.24□□□□□ -0.45
PVT1-216ENST00000523068 LRRC71Q8N4P6 559 aa12.24□□□□□ -0.45
PVT1-216ENST00000523068 BANK1Q8NDB2 785 aa12.24□□□□□ -0.45
PVT1-216ENST00000523068 NSUN7Q8NE18 718 aaKnown RBP12.24□□□□□ -0.45
PVT1-216ENST00000523068 OXER1Q8TDS5 423 aa12.24□□□□□ -0.45
PVT1-216ENST00000523068 P2RX5Q93086 422 aa12.24□□□□□ -0.45
PVT1-216ENST00000523068 SCLT1Q96NL6 688 aa12.24□□□□□ -0.45
PVT1-216ENST00000523068 NSUN3Q9H649 340 aaKnown RBP12.24□□□□□ -0.45
PVT1-216ENST00000523068 GJB4Q9NTQ9 266 aa12.24□□□□□ -0.45
PVT1-216ENST00000523068 PLXNA4Q9HCM2 1894 aa12.23□□□□□ -0.45
PVT1-216ENST00000523068 DDX11L8A8MPP1 907 aa12.23□□□□□ -0.45
PVT1-216ENST00000523068 C9IYK1 514 aa12.23□□□□□ -0.45
PVT1-216ENST00000523068 MGEA5O60502 916 aa12.23□□□□□ -0.45
PVT1-216ENST00000523068 LARGE1O95461 756 aa12.23□□□□□ -0.45
PVT1-216ENST00000523068 SEC24BO95487 1268 aa12.23□□□□□ -0.45
PVT1-216ENST00000523068 MMP1P03956 469 aa12.23□□□□□ -0.45
PVT1-216ENST00000523068 P4HBP07237 508 aaKnown RBP12.23□□□□□ -0.45
PVT1-216ENST00000523068 LINC00271P0C7V0 271 aa12.23□□□□□ -0.45
PVT1-216ENST00000523068 FDPSP14324 419 aaKnown RBP12.23□□□□□ -0.45
PVT1-216ENST00000523068 ZSCAN20P17040 1043 aaPredicted RBP12.23□□□□□ -0.45
PVT1-216ENST00000523068 QARSP47897 775 aaKnown RBP12.23□□□□□ -0.45
PVT1-216ENST00000523068 GPC3P51654 580 aa12.23□□□□□ -0.45
PVT1-216ENST00000523068 KCNQ1P51787 676 aa12.23□□□□□ -0.45
PVT1-216ENST00000523068 PAN2Q504Q3 1202 aaKnown RBP12.23□□□□□ -0.45
PVT1-216ENST00000523068 EXOC8Q8IYI6 725 aa12.23□□□□□ -0.45
PVT1-216ENST00000523068 ADAMTS10Q9H324 1103 aa12.23□□□□□ -0.45
PVT1-216ENST00000523068 ELAC1Q9H777 363 aaKnown RBP12.23□□□□□ -0.45
PVT1-216ENST00000523068 UBE2ZQ9H832 354 aaPredicted RBP12.23□□□□□ -0.45
PVT1-216ENST00000523068 VAV3Q9UKW4 847 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms