RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 PTPRTO14522 1441 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 UHRF1BP1Q6BDS2 1440 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 MADDQ8WXG6 1647 aa3.52□□□□□ -1.85
CKS1BP7-201ENST00000522230 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 CLASP2O75122 1294 aaKnown RBP3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 MPOP05164 745 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 CLEC2LP0C7M8 214 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 MYBL2P10244 700 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 MC3RP41968 323 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 TNNT2P45379 298 aaPredicted RBP3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 EPHA5P54756 1037 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 NCKAP1LP55160 1127 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 ERVK-21P61565 698 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 SMAD3P84022 425 aaKnown RBP3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 ZNF200P98182 395 aaPredicted RBP3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 SNX17Q15036 470 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 PDCD1Q15116 288 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 TERF2Q15554 542 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 ZNF174Q15697 407 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 SMAD2Q15796 467 aaKnown RBP3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 PAN2Q504Q3 1202 aaKnown RBP3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 CBLL1Q75N03 491 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 TMC6Q7Z403 805 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 STK32CQ86UX6 486 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 ALG3Q92685 438 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 TSR2Q969E8 191 aaKnown RBP3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 PEX11GQ96HA9 241 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 AHCYL2Q96HN2 611 aaKnown RBP3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 PANK3Q9H999 370 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 ZFP64Q9NPA5 681 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 KCNH7Q9NS40 1196 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 TYW1Q9NV66 732 aaKnown RBP3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 EDARQ9UNE0 448 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 WASF3Q9UPY6 502 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 EID1Q9Y6B2 187 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 KIF1BO60333 1816 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 MYO5BQ9ULV0 1848 aa3.51□□□□□ -1.85
CKS1BP7-201ENST00000522230 ZMYM4Q5VZL5 1548 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 ARHGEF40Q8TER5 1519 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 ERVK-7P63135 1459 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 SHTN1A0MZ66 631 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 PRAMEF22A3QJZ6 481 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 OR14I1A6ND48 311 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 FOXP2O15409 715 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 PAPLNO95428 1278 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 LRG1P02750 347 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 VIPR1P32241 457 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 IRX6P78412 446 aaPredicted RBP3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 TMF1P82094 1093 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 OCRLQ01968 901 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 MCL1Q07820 350 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 PCBP2Q15366 365 aaKnown RBP eCLIP3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 CHRNA2Q15822 529 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 KCNMB1Q16558 191 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 PTPN21Q16825 1174 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 SYDE2Q5VT97 1194 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 PRAMEF18Q5VWM3 479 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 CYP4F22Q6NT55 531 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 LRSAM1Q6UWE0 723 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 TMC5Q6UXY8 1006 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 LIPIQ6XZB0 460 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 ZNF605Q86T29 641 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 ZSWIM9Q86XI8 627 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 FMNL3Q8IVF7 1028 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 NLGN4XQ8N0W4 816 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 ASB15Q8WXK1 588 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 HOOK2Q96ED9 719 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 ZNF496Q96IT1 587 aaPredicted RBP3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 GBP4Q96PP9 640 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 TESK2Q96S53 571 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 DIRC2Q96SL1 478 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 PUS7LQ9H0K6 701 aaKnown RBP3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 PRDM12Q9H4Q4 367 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 SLC39A2Q9NP94 309 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 UCKL1Q9NWZ5 548 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 CHPF2Q9P2E5 772 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 NUDT5Q9UKK9 219 aa3.5□□□□□ -1.85
CKS1BP7-201ENST00000522230 ADGRB3O60242 1522 aa3.49□□□□□ -1.85
CKS1BP7-201ENST00000522230 LMTK2Q8IWU2 1503 aa3.49□□□□□ -1.85
CKS1BP7-201ENST00000522230 PIK3C2BO00750 1634 aa3.49□□□□□ -1.85
CKS1BP7-201ENST00000522230 ZNF503-AS2A6NEH8 195 aa3.49□□□□□ -1.85
CKS1BP7-201ENST00000522230 GOLGA8AA7E2F4 631 aa3.49□□□□□ -1.85
CKS1BP7-201ENST00000522230 GOLGA8BA8MQT2 603 aa3.49□□□□□ -1.85
CKS1BP7-201ENST00000522230 KDM1AO60341 852 aa3.49□□□□□ -1.85
CKS1BP7-201ENST00000522230 MAFKO60675 156 aa3.49□□□□□ -1.85
CKS1BP7-201ENST00000522230 ULK1O75385 1050 aa3.49□□□□□ -1.85
CKS1BP7-201ENST00000522230 APOL3O95236 402 aa3.49□□□□□ -1.85
CKS1BP7-201ENST00000522230 ASGR2P07307 311 aa3.49□□□□□ -1.85
CKS1BP7-201ENST00000522230 C8BP07358 591 aa3.49□□□□□ -1.85
CKS1BP7-201ENST00000522230 GLI1P08151 1106 aa3.49□□□□□ -1.85
CKS1BP7-201ENST00000522230 FAHP16930 419 aa3.49□□□□□ -1.85
CKS1BP7-201ENST00000522230 MAPKAPK2P49137 400 aa3.49□□□□□ -1.85
CKS1BP7-201ENST00000522230 RAB27AP51159 221 aa3.49□□□□□ -1.85
CKS1BP7-201ENST00000522230 NEK2P51955 445 aa3.49□□□□□ -1.85
CKS1BP7-201ENST00000522230 SESN3P58005 492 aa3.49□□□□□ -1.85
CKS1BP7-201ENST00000522230 ODF1Q14990 250 aa3.49□□□□□ -1.85
CKS1BP7-201ENST00000522230 CR1LQ2VPA4 569 aa3.49□□□□□ -1.85
CKS1BP7-201ENST00000522230 CT83Q5H943 113 aa3.49□□□□□ -1.85
CKS1BP7-201ENST00000522230 CD276Q5ZPR3 534 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms