RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 TBC1D32Q96NH3 1257 aa20.08■□□□□ 0.81
TRAPPC9-211ENST00000521700 TGS1Q96RS0 853 aaKnown RBP20.08■□□□□ 0.81
TRAPPC9-211ENST00000521700 OSMRQ99650 979 aa20.08■□□□□ 0.81
TRAPPC9-211ENST00000521700 ERVK-5Q9HDB9 667 aa20.08■□□□□ 0.81
TRAPPC9-211ENST00000521700 AKT3Q9Y243 479 aa20.08■□□□□ 0.81
TRAPPC9-211ENST00000521700 TTC3P53804 2025 aa20.08■□□□□ 0.8
TRAPPC9-211ENST00000521700 CD2BP2O95400 341 aaKnown RBP20.07■□□□□ 0.8
TRAPPC9-211ENST00000521700 POU3F3P20264 500 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC9-211ENST00000521700 NLRP11P59045 1033 aaKnown RBP20.07■□□□□ 0.8
TRAPPC9-211ENST00000521700 GRB10Q13322 594 aa20.07■□□□□ 0.8
TRAPPC9-211ENST00000521700 CALCRLQ16602 461 aa20.07■□□□□ 0.8
TRAPPC9-211ENST00000521700 NCAPH2Q6IBW4 605 aa20.07■□□□□ 0.8
TRAPPC9-211ENST00000521700 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.07■□□□□ 0.8
TRAPPC9-211ENST00000521700 IL27Q8NEV9 243 aa20.07■□□□□ 0.8
TRAPPC9-211ENST00000521700 MAP7D2Q96T17 732 aa20.07■□□□□ 0.8
TRAPPC9-211ENST00000521700 ADAMTS10Q9H324 1103 aa20.07■□□□□ 0.8
TRAPPC9-211ENST00000521700 RGL1Q9NZL6 768 aa20.07■□□□□ 0.8
TRAPPC9-211ENST00000521700 WRAP73Q9P2S5 460 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC9-211ENST00000521700 MTUS1Q9ULD2 1270 aa20.07■□□□□ 0.8
TRAPPC9-211ENST00000521700 PCDHA12Q9UN75 941 aa20.07■□□□□ 0.8
TRAPPC9-211ENST00000521700 ST3GAL5Q9UNP4 418 aa20.07■□□□□ 0.8
TRAPPC9-211ENST00000521700 MTCH2Q9Y6C9 303 aa20.07■□□□□ 0.8
TRAPPC9-211ENST00000521700 IGKV6-21A0A0C4DH24 114 aa20.06■□□□□ 0.8
TRAPPC9-211ENST00000521700 NEMFO60524 1076 aa20.06■□□□□ 0.8
TRAPPC9-211ENST00000521700 LPXNO60711 386 aa20.06■□□□□ 0.8
TRAPPC9-211ENST00000521700 ATP2B1P20020 1258 aa20.06■□□□□ 0.8
TRAPPC9-211ENST00000521700 DRP2Q13474 957 aa20.06■□□□□ 0.8
TRAPPC9-211ENST00000521700 CCDC85BQ15834 202 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC9-211ENST00000521700 FAM228AQ86W67 206 aa20.06■□□□□ 0.8
TRAPPC9-211ENST00000521700 CRIPAKQ8N1N5 446 aa20.06■□□□□ 0.8
TRAPPC9-211ENST00000521700 TMX3Q96JJ7 454 aa20.06■□□□□ 0.8
TRAPPC9-211ENST00000521700 MTMR9Q96QG7 549 aa20.06■□□□□ 0.8
TRAPPC9-211ENST00000521700 C17orf80Q9BSJ5 609 aa20.06■□□□□ 0.8
TRAPPC9-211ENST00000521700 TSPYL2Q9H2G4 693 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC9-211ENST00000521700 FOXP1Q9H334 677 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC9-211ENST00000521700 EYSQ5T1H1 3165 aa20.06■□□□□ 0.8
TRAPPC9-211ENST00000521700 GPR182O15218 404 aa20.05■□□□□ 0.8
TRAPPC9-211ENST00000521700 DKC1O60832 514 aaKnown RBP eCLIP20.05■□□□□ 0.85e-7■■■■■ 27.5
TRAPPC9-211ENST00000521700 TXKP42681 527 aa20.05■□□□□ 0.8
TRAPPC9-211ENST00000521700 ODR4Q5SWX8 454 aa20.05■□□□□ 0.8
TRAPPC9-211ENST00000521700 PLA2G4FQ68DD2 849 aa20.05■□□□□ 0.8
TRAPPC9-211ENST00000521700 DYDC2Q96IM9 177 aa20.05■□□□□ 0.8
TRAPPC9-211ENST00000521700 ZNF668Q96K58 619 aaPredicted RBP20.05■□□□□ 0.8
TRAPPC9-211ENST00000521700 TMEM60Q9H2L4 133 aa20.05■□□□□ 0.8
TRAPPC9-211ENST00000521700 TTC12Q9H892 705 aaPredicted RBP20.05■□□□□ 0.8
TRAPPC9-211ENST00000521700 DLL1O00548 723 aa20.04■□□□□ 0.8
TRAPPC9-211ENST00000521700 MGEA5O60502 916 aa20.04■□□□□ 0.8
TRAPPC9-211ENST00000521700 MAFO75444 373 aaPredicted RBP20.04■□□□□ 0.8
TRAPPC9-211ENST00000521700 DGKIO75912 1065 aa20.04■□□□□ 0.8
TRAPPC9-211ENST00000521700 SLITRK3O94933 977 aa20.04■□□□□ 0.8
TRAPPC9-211ENST00000521700 MCM7P33993 719 aa20.04■□□□□ 0.8
TRAPPC9-211ENST00000521700 GPC3P51654 580 aa20.04■□□□□ 0.8
TRAPPC9-211ENST00000521700 NPEPPSP55786 919 aa20.04■□□□□ 0.8
TRAPPC9-211ENST00000521700 CTTNQ14247 550 aaKnown RBP20.04■□□□□ 0.8
TRAPPC9-211ENST00000521700 FAM43BQ6ZT52 329 aaPredicted RBP20.04■□□□□ 0.8
TRAPPC9-211ENST00000521700 C4orf19Q8IY42 314 aa20.04■□□□□ 0.8
TRAPPC9-211ENST00000521700 ZNF710Q8N1W2 664 aa20.04■□□□□ 0.8
TRAPPC9-211ENST00000521700 ZNF579Q8NAF0 562 aaKnown RBP20.04■□□□□ 0.8
TRAPPC9-211ENST00000521700 GDPD5Q8WTR4 605 aa20.04■□□□□ 0.8
TRAPPC9-211ENST00000521700 ZNF689Q96CS4 500 aaPredicted RBP20.04■□□□□ 0.8
TRAPPC9-211ENST00000521700 LXNQ9BS40 222 aa20.04■□□□□ 0.8
TRAPPC9-211ENST00000521700 RC3H2Q9HBD1 1191 aaKnown RBP20.04■□□□□ 0.8
TRAPPC9-211ENST00000521700 PRDM6Q9NQX0 595 aa20.04■□□□□ 0.8
TRAPPC9-211ENST00000521700 CYP26B1Q9NR63 512 aa20.04■□□□□ 0.8
TRAPPC9-211ENST00000521700 PRRC2BQ5JSZ5 2229 aaKnown RBP20.04■□□□□ 0.8
TRAPPC9-211ENST00000521700 GTPBP6O43824 516 aaPredicted RBP20.03■□□□□ 0.8
TRAPPC9-211ENST00000521700 CYP4A11Q02928 519 aa20.03■□□□□ 0.8
TRAPPC9-211ENST00000521700 NPAS4Q8IUM7 802 aa20.03■□□□□ 0.8
TRAPPC9-211ENST00000521700 MICALL1Q8N3F8 863 aa20.03■□□□□ 0.8
TRAPPC9-211ENST00000521700 ADAM2Q99965 735 aa20.03■□□□□ 0.8
TRAPPC9-211ENST00000521700 HSD17B14Q9BPX1 270 aa20.03■□□□□ 0.8
TRAPPC9-211ENST00000521700 EIF2AK1Q9BQI3 630 aaKnown RBP20.03■□□□□ 0.8
TRAPPC9-211ENST00000521700 ZSWIM4Q9H7M6 989 aa20.03■□□□□ 0.8
TRAPPC9-211ENST00000521700 RGS18Q9NS28 235 aa20.03■□□□□ 0.8
TRAPPC9-211ENST00000521700 COL4A6Q14031 1691 aa20.03■□□□□ 0.8
TRAPPC9-211ENST00000521700 ZBTB39O15060 712 aa20.02■□□□□ 0.8
TRAPPC9-211ENST00000521700 EIF4BP23588 611 aaKnown RBP20.02■□□□□ 0.8
TRAPPC9-211ENST00000521700 YWHABP31946 246 aaKnown RBP20.02■□□□□ 0.8
TRAPPC9-211ENST00000521700 MCM2P49736 904 aa20.02■□□□□ 0.8
TRAPPC9-211ENST00000521700 DNM2P50570 870 aa20.02■□□□□ 0.8
TRAPPC9-211ENST00000521700 ZNF174Q15697 407 aa20.02■□□□□ 0.8
TRAPPC9-211ENST00000521700 EPC2Q52LR7 807 aa20.02■□□□□ 0.8
TRAPPC9-211ENST00000521700 NOSTRINQ8IVI9 506 aa20.02■□□□□ 0.8
TRAPPC9-211ENST00000521700 TPH2Q8IWU9 490 aa20.02■□□□□ 0.8
TRAPPC9-211ENST00000521700 FIBCD1Q8N539 461 aa20.02■□□□□ 0.8
TRAPPC9-211ENST00000521700 FBXO22Q8NEZ5 403 aa20.02■□□□□ 0.8
TRAPPC9-211ENST00000521700 CEP170P1Q96L14 293 aa20.02■□□□□ 0.8
TRAPPC9-211ENST00000521700 SAMD11Q96NU1 681 aa20.02■□□□□ 0.8
TRAPPC9-211ENST00000521700 SUCLA2Q9P2R7 463 aaPredicted RBP20.02■□□□□ 0.8
TRAPPC9-211ENST00000521700 COL4A4P53420 1690 aaPredicted RBP20.02■□□□□ 0.8
TRAPPC9-211ENST00000521700 A0A0C4DFX4 3053 aa20.02■□□□□ 0.8
TRAPPC9-211ENST00000521700 DENND3A2RUS2 1198 aa20.01■□□□□ 0.79
TRAPPC9-211ENST00000521700 STAG3L1P0CL83 205 aa20.01■□□□□ 0.79
TRAPPC9-211ENST00000521700 DARSP14868 501 aaKnown RBP20.01■□□□□ 0.79
TRAPPC9-211ENST00000521700 U2AF2P26368 475 aaKnown RBP eCLIP20.01■□□□□ 0.79
TRAPPC9-211ENST00000521700 SARSP49591 514 aaKnown RBP20.01■□□□□ 0.79
TRAPPC9-211ENST00000521700 CDC42EP1Q00587 391 aa20.01■□□□□ 0.79
TRAPPC9-211ENST00000521700 GNL2Q13823 731 aaKnown RBP20.01■□□□□ 0.79
TRAPPC9-211ENST00000521700 DSC3Q14574 896 aa20.01■□□□□ 0.79
TRAPPC9-211ENST00000521700 OTUD6AQ7L8S5 288 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms