RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 METTL7BQ6UX53 244 aa8.86□□□□□ -0.99
HMBOX1-208ENST00000521516 CYP26C1Q6V0L0 522 aa8.86□□□□□ -0.99
HMBOX1-208ENST00000521516 BBXQ8WY36 941 aaPredicted RBP8.86□□□□□ -0.99
HMBOX1-208ENST00000521516 STAMQ92783 540 aa8.86□□□□□ -0.99
HMBOX1-208ENST00000521516 GPKOWQ92917 476 aaPredicted RBP eCLIP8.86□□□□□ -0.99
HMBOX1-208ENST00000521516 CASD1Q96PB1 797 aa8.86□□□□□ -0.99
HMBOX1-208ENST00000521516 KLHL5Q96PQ7 755 aa8.86□□□□□ -0.99
HMBOX1-208ENST00000521516 PDCD2LQ9BRP1 358 aa8.86□□□□□ -0.99
HMBOX1-208ENST00000521516 ELAC1Q9H777 363 aaKnown RBP8.86□□□□□ -0.99
HMBOX1-208ENST00000521516 TMEM161AQ9NX61 479 aa8.86□□□□□ -0.99
HMBOX1-208ENST00000521516 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.86□□□□□ -0.99
HMBOX1-208ENST00000521516 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 PAPLNO95428 1278 aa8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 TDO2P48775 406 aa8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 GHRHRQ02643 423 aa8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 FOXC1Q12948 553 aa8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 CCDC6Q16204 474 aa8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 AASDHQ4L235 1098 aaPredicted RBP8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 ATP6V0A4Q9HBG4 840 aa8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 RNF19AQ9NV58 838 aa8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 HECTD1Q9ULT8 2610 aa8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 RALGAPA1Q6GYQ0 2036 aa8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 CLUHO75153 1309 aa8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 USP9XQ93008 2570 aaPredicted RBP8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 KALRNO60229 2985 aa8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 CTSAP10619 480 aa8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 LAMP2P13473 410 aa8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 NCLP19338 710 aaKnown RBP8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 GPC5P78333 572 aa8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 PPFIA1Q13136 1202 aa8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 FZD5Q13467 585 aa8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 SNW1Q13573 536 aaKnown RBP8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 GRIK4Q16099 956 aa8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 ZBTB41Q5SVQ8 909 aa8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 LRRC43Q8N309 656 aa8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 CLUAP1Q96AJ1 413 aa8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 KAT6AQ92794 2004 aa8.85□□□□□ -0.99
HMBOX1-208ENST00000521516 MYO18BQ8IUG5 2567 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 LAMA4Q16363 1823 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 PDHBP11177 359 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 POLGP54098 1239 aaPredicted RBP8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 ZNF543Q08ER8 600 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 MTAPQ13126 283 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 SIM2Q14190 667 aaPredicted RBP8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 SLC44A4Q53GD3 710 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 GLIS3Q8NEA6 775 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 NELL2Q99435 816 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 ADAM2Q99965 735 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 SCNM1Q9BWG6 230 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 CELF4Q9BZC1 486 aaKnown RBP8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 IL1RAPL2Q9NP60 686 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 NUMBLQ9Y6R0 609 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 TOP3BO95985 862 aaKnown RBP8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 CAPNS1P04632 268 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 SLC3A2P08195 630 aaKnown RBP8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 SNHG28P0DPA3 235 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 MYCLP12524 364 aaPredicted RBP8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 ATP5JP18859 108 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 GNAT2P19087 354 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 IBSPP21815 317 aaPredicted RBP8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 TARSP26639 723 aaKnown RBP8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 HSD17B4P51659 736 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 CLCN4P51793 760 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 STOX1Q6ZVD7 989 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 VPS52Q8N1B4 723 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 TMEM87AQ8NBN3 555 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 AUTS2Q8WXX7 1259 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 BOLA2Q9H3K6 86 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 TELO2Q9Y4R8 837 aa8.84□□□□□ -0.99
HMBOX1-208ENST00000521516 GREB1Q4ZG55 1949 aa8.83□□□□□ -1
HMBOX1-208ENST00000521516 TSPY2A6NKD2 308 aa8.83□□□□□ -1
HMBOX1-208ENST00000521516 NCAM2O15394 837 aa8.83□□□□□ -1
HMBOX1-208ENST00000521516 HOXA2O43364 376 aa8.83□□□□□ -1
HMBOX1-208ENST00000521516 HRO43593 1189 aa8.83□□□□□ -1
HMBOX1-208ENST00000521516 ZNF806P0C7X5 589 aa8.83□□□□□ -1
HMBOX1-208ENST00000521516 TOP1P11387 765 aaKnown RBP8.83□□□□□ -1
HMBOX1-208ENST00000521516 CA8P35219 290 aa8.83□□□□□ -1
HMBOX1-208ENST00000521516 ZNF252P-AS1Q0IIN9 211 aa8.83□□□□□ -1
HMBOX1-208ENST00000521516 NEDD9Q14511 834 aa8.83□□□□□ -1
HMBOX1-208ENST00000521516 SF3A2Q15428 464 aaKnown RBP8.83□□□□□ -1
HMBOX1-208ENST00000521516 TMEM266Q2M3C6 531 aa8.83□□□□□ -1
HMBOX1-208ENST00000521516 UTP14CQ5TAP6 766 aaKnown RBP8.83□□□□□ -1
HMBOX1-208ENST00000521516 IFNL3Q8IZI9 196 aa8.83□□□□□ -1
HMBOX1-208ENST00000521516 IL31RAQ8NI17 732 aa8.83□□□□□ -1
HMBOX1-208ENST00000521516 OSBP2Q969R2 916 aa8.83□□□□□ -1
HMBOX1-208ENST00000521516 TMEM47Q9BQJ4 181 aa8.83□□□□□ -1
HMBOX1-208ENST00000521516 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.83□□□□□ -11e-6■□□□□ 8.3
HMBOX1-208ENST00000521516 EXOC6BQ9Y2D4 811 aa8.83□□□□□ -1
HMBOX1-208ENST00000521516 NEUROG3Q9Y4Z2 214 aa8.83□□□□□ -1
HMBOX1-208ENST00000521516 DENND3A2RUS2 1198 aa8.82□□□□□ -1
HMBOX1-208ENST00000521516 PATL2C9JE40 543 aaKnown RBP8.82□□□□□ -1
HMBOX1-208ENST00000521516 M0QZ92 97 aa8.82□□□□□ -1
HMBOX1-208ENST00000521516 TRIM27P14373 513 aa8.82□□□□□ -1
HMBOX1-208ENST00000521516 CNR2P34972 360 aa8.82□□□□□ -1
HMBOX1-208ENST00000521516 NOVA1P51513 510 aaKnown RBP8.82□□□□□ -1
HMBOX1-208ENST00000521516 PPARAQ07869 468 aa8.82□□□□□ -1
HMBOX1-208ENST00000521516 PGM5Q15124 567 aa8.82□□□□□ -1
HMBOX1-208ENST00000521516 CYFIP1Q7L576 1253 aa8.82□□□□□ -1
HMBOX1-208ENST00000521516 RHPN1Q8TCX5 695 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms