RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 TMEM40Q8WWA1 233 aa23.14■■□□□ 1.29
TRIM35-203ENST00000521253 MAP7D2Q96T17 732 aa23.14■■□□□ 1.29
TRIM35-203ENST00000521253 HSD17B14Q9BPX1 270 aa23.14■■□□□ 1.29
TRIM35-203ENST00000521253 EIF2AK1Q9BQI3 630 aaKnown RBP23.14■■□□□ 1.29
TRIM35-203ENST00000521253 ZSWIM4Q9H7M6 989 aa23.14■■□□□ 1.29
TRIM35-203ENST00000521253 PADI3Q9ULW8 664 aa23.14■■□□□ 1.29
TRIM35-203ENST00000521253 IGKV6-21A0A0C4DH24 114 aa23.13■■□□□ 1.29
TRIM35-203ENST00000521253 POTEMA6NI47 508 aa23.13■■□□□ 1.29
TRIM35-203ENST00000521253 SLITRK3O94933 977 aa23.13■■□□□ 1.29
TRIM35-203ENST00000521253 ARHGEF15O94989 841 aa23.13■■□□□ 1.29
TRIM35-203ENST00000521253 NPEPPSP55786 919 aa23.13■■□□□ 1.29
TRIM35-203ENST00000521253 PAK2Q13177 524 aa23.13■■□□□ 1.29
TRIM35-203ENST00000521253 DRP2Q13474 957 aa23.13■■□□□ 1.29
TRIM35-203ENST00000521253 TMEM266Q2M3C6 531 aa23.13■■□□□ 1.29
TRIM35-203ENST00000521253 TPH2Q8IWU9 490 aa23.13■■□□□ 1.29
TRIM35-203ENST00000521253 RAD9AQ99638 391 aa23.13■■□□□ 1.29
TRIM35-203ENST00000521253 OSMRQ99650 979 aa23.13■■□□□ 1.29
TRIM35-203ENST00000521253 CYP26B1Q9NR63 512 aa23.13■■□□□ 1.29
TRIM35-203ENST00000521253 STXBP5LQ9Y2K9 1186 aa23.13■■□□□ 1.29
TRIM35-203ENST00000521253 GBF1Q92538 1859 aa23.13■■□□□ 1.29
TRIM35-203ENST00000521253 PTPRSQ13332 1948 aa23.12■■□□□ 1.29
TRIM35-203ENST00000521253 LCHNA4D1U4 455 aa23.12■■□□□ 1.29
TRIM35-203ENST00000521253 MAFO75444 373 aaPredicted RBP23.12■■□□□ 1.29
TRIM35-203ENST00000521253 YWHABP31946 246 aaKnown RBP23.12■■□□□ 1.29
TRIM35-203ENST00000521253 CRYBB1P53674 252 aaPredicted RBP23.12■■□□□ 1.29
TRIM35-203ENST00000521253 LARP1BQ659C4 914 aaKnown RBP23.12■■□□□ 1.29
TRIM35-203ENST00000521253 MICAL3Q7RTP6 2002 aa23.12■■□□□ 1.29
TRIM35-203ENST00000521253 C4orf32Q8N8J7 132 aa23.12■■□□□ 1.29
TRIM35-203ENST00000521253 ZNF579Q8NAF0 562 aaKnown RBP23.12■■□□□ 1.29
TRIM35-203ENST00000521253 NEK9Q8TD19 979 aa23.12■■□□□ 1.29
TRIM35-203ENST00000521253 LINC01599Q8WXQ3 324 aa23.12■■□□□ 1.29
TRIM35-203ENST00000521253 MYLIPQ8WY64 445 aa23.12■■□□□ 1.29
TRIM35-203ENST00000521253 TOP1MTQ969P6 601 aa23.12■■□□□ 1.29
TRIM35-203ENST00000521253 CEP170P1Q96L14 293 aa23.12■■□□□ 1.29
TRIM35-203ENST00000521253 NOC2LQ9Y3T9 749 aaKnown RBP23.12■■□□□ 1.29
TRIM35-203ENST00000521253 PCDHB6Q9Y5E3 794 aa23.12■■□□□ 1.29
TRIM35-203ENST00000521253 ENPP3O14638 875 aa23.11■■□□□ 1.29
TRIM35-203ENST00000521253 ZBTB39O15060 712 aa23.11■■□□□ 1.29
TRIM35-203ENST00000521253 RPS6KA5O75582 802 aa23.11■■□□□ 1.29
TRIM35-203ENST00000521253 TECP42680 631 aa23.11■■□□□ 1.29
TRIM35-203ENST00000521253 NLRP11P59045 1033 aaKnown RBP23.11■■□□□ 1.29
TRIM35-203ENST00000521253 ADAMTS10Q9H324 1103 aa23.11■■□□□ 1.29
TRIM35-203ENST00000521253 EVPLQ92817 2033 aa23.11■■□□□ 1.29
TRIM35-203ENST00000521253 UPP2O95045 317 aa23.1■■□□□ 1.29
TRIM35-203ENST00000521253 LYPLA2O95372 231 aa23.1■■□□□ 1.29
TRIM35-203ENST00000521253 GPC3P51654 580 aa23.1■■□□□ 1.29
TRIM35-203ENST00000521253 TAP1Q03518 808 aa23.1■■□□□ 1.29
TRIM35-203ENST00000521253 NFX1Q12986 1120 aaKnown RBP23.1■■□□□ 1.29
TRIM35-203ENST00000521253 OTUD6AQ7L8S5 288 aa23.1■■□□□ 1.29
TRIM35-203ENST00000521253 ZNF710Q8N1W2 664 aa23.1■■□□□ 1.29
TRIM35-203ENST00000521253 ZNF668Q96K58 619 aaPredicted RBP23.1■■□□□ 1.29
TRIM35-203ENST00000521253 FTHL17Q9BXU8 183 aa23.1■■□□□ 1.29
TRIM35-203ENST00000521253 TMX1Q9H3N1 280 aa23.1■■□□□ 1.29
TRIM35-203ENST00000521253 PRDM12Q9H4Q4 367 aa23.1■■□□□ 1.29
TRIM35-203ENST00000521253 ERVK-5Q9HDB9 667 aa23.1■■□□□ 1.29
TRIM35-203ENST00000521253 PPME1Q9Y570 386 aa23.1■■□□□ 1.29
TRIM35-203ENST00000521253 EYSQ5T1H1 3165 aa23.1■■□□□ 1.29
TRIM35-203ENST00000521253 K7ELQ4 463 aaPredicted RBP23.09■■□□□ 1.29
TRIM35-203ENST00000521253 HTRA4P83105 476 aaPredicted RBP23.09■■□□□ 1.29
TRIM35-203ENST00000521253 PTGDRQ13258 359 aa23.09■■□□□ 1.29
TRIM35-203ENST00000521253 RTN4RL1Q86UN2 441 aaPredicted RBP23.09■■□□□ 1.29
TRIM35-203ENST00000521253 JPH2Q9BR39 696 aaPredicted RBP23.09■■□□□ 1.29
TRIM35-203ENST00000521253 ST3GAL5Q9UNP4 418 aa23.09■■□□□ 1.29
TRIM35-203ENST00000521253 INSL6Q9Y581 213 aa23.09■■□□□ 1.29
TRIM35-203ENST00000521253 DNM2P50570 870 aa23.08■■□□□ 1.29
TRIM35-203ENST00000521253 RILPL1Q5EBL4 403 aa23.08■■□□□ 1.29
TRIM35-203ENST00000521253 XKR9Q5GH70 373 aa23.08■■□□□ 1.29
TRIM35-203ENST00000521253 FAM228AQ86W67 206 aa23.08■■□□□ 1.29
TRIM35-203ENST00000521253 SLC7A3Q8WY07 619 aa23.08■■□□□ 1.29
TRIM35-203ENST00000521253 TSPYL2Q9H2G4 693 aaPredicted RBP23.08■■□□□ 1.29
TRIM35-203ENST00000521253 DHX33Q9H6R0 707 aaKnown RBP23.08■■□□□ 1.29
TRIM35-203ENST00000521253 SUCLA2Q9P2R7 463 aaPredicted RBP23.08■■□□□ 1.29
TRIM35-203ENST00000521253 GPR182O15218 404 aa23.07■■□□□ 1.28
TRIM35-203ENST00000521253 SPATA31C1P0DKV0 1188 aa23.07■■□□□ 1.28
TRIM35-203ENST00000521253 FOSL2P15408 326 aa23.07■■□□□ 1.28
TRIM35-203ENST00000521253 EIF4BP23588 611 aaKnown RBP23.07■■□□□ 1.28
TRIM35-203ENST00000521253 RFC5P40937 340 aa23.07■■□□□ 1.28
TRIM35-203ENST00000521253 POLGP54098 1239 aaPredicted RBP23.07■■□□□ 1.28
TRIM35-203ENST00000521253 SPRED2Q7Z698 418 aa23.07■■□□□ 1.28
TRIM35-203ENST00000521253 NLRP7Q8WX94 980 aa23.07■■□□□ 1.28
TRIM35-203ENST00000521253 INTS4Q96HW7 963 aaKnown RBP23.07■■□□□ 1.28
TRIM35-203ENST00000521253 SCLT1Q96NL6 688 aa23.07■■□□□ 1.28
TRIM35-203ENST00000521253 CERS4Q9HA82 394 aa23.07■■□□□ 1.28
TRIM35-203ENST00000521253 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.07■■□□□ 1.28
TRIM35-203ENST00000521253 BMP2KQ9NSY1 1161 aaPredicted RBP23.07■■□□□ 1.28
TRIM35-203ENST00000521253 TRANK1O15050 2925 aa23.06■■□□□ 1.28
TRIM35-203ENST00000521253 MGEA5O60502 916 aa23.06■■□□□ 1.28
TRIM35-203ENST00000521253 MED24O75448 989 aa23.06■■□□□ 1.28
TRIM35-203ENST00000521253 FXR2P51116 673 aaKnown RBP eCLIP23.06■■□□□ 1.28
TRIM35-203ENST00000521253 ODR4Q5SWX8 454 aa23.06■■□□□ 1.28
TRIM35-203ENST00000521253 CATSPER3Q86XQ3 398 aa23.06■■□□□ 1.28
TRIM35-203ENST00000521253 EXOC8Q8IYI6 725 aa23.06■■□□□ 1.28
TRIM35-203ENST00000521253 SNX21Q969T3 373 aa23.06■■□□□ 1.28
TRIM35-203ENST00000521253 YME1L1Q96TA2 773 aa23.06■■□□□ 1.28
TRIM35-203ENST00000521253 POLR3CQ9BUI4 534 aaPredicted RBP23.06■■□□□ 1.28
TRIM35-203ENST00000521253 TUFT1Q9NNX1 390 aa23.06■■□□□ 1.28
TRIM35-203ENST00000521253 ANKEF1Q9NU02 776 aa23.06■■□□□ 1.28
TRIM35-203ENST00000521253 A0A087WWV3 80 aa23.05■■□□□ 1.28
TRIM35-203ENST00000521253 LINC01553A4QN01 128 aa23.05■■□□□ 1.28
TRIM35-203ENST00000521253 DARSP14868 501 aaKnown RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms