RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 SEMA4AQ9H3S1 761 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 ASIC3Q9UHC3 531 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 NFS1Q9Y697 457 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 PKD1L3Q7Z443 1732 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 TCP11X1B4DZS4 312 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 KIAA1755Q5JYT7 1200 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 ERMARDQ5T6L9 678 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 CHADLQ6NUI6 762 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 PRCCQ92733 491 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 ENO4A6NNW6 628 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 IGF2BP3O00425 579 aaKnown RBP eCLIP13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 PON1P27169 355 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 PDE6CP51160 858 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 SARNPP82979 210 aaKnown RBP13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 XRCC4Q13426 336 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 PDIA5Q14554 519 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 C6orf118Q5T5N4 469 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 MAEAQ7L5Y9 396 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 FAM228AQ86W67 206 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 VSIG1Q86XK7 387 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 JAMLQ86YT9 394 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 ERMNQ8TAM6 284 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 WDR66Q8TBY9 1149 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 SETDB2Q96T68 719 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 RTCBQ9Y3I0 505 aaKnown RBP13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 FERP16591 822 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 STX2P32856 288 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 CASP4P49662 377 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 KCNJ2P63252 427 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 SYCP3Q8IZU3 236 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 UBL4BQ8N7F7 174 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 YIPF3Q9GZM5 350 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 PABPC3Q9H361 631 aaKnown RBP13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 SUCLA2Q9P2R7 463 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 PPP1R9AQ9ULJ8 1098 aa13.88□□□□□ -0.19
TRAPPC9-208ENST00000520857 A0A1W2PRG0 241 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 SRRM3A6NNA2 597 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 EVI5O60447 810 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 FAM13AO94988 1023 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 ECHS1P30084 290 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 PCK1P35558 622 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 AADACL2Q6P093 401 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 KCTD1Q719H9 257 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 C1orf131Q8NDD1 294 aaKnown RBP13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 ZNF622Q969S3 477 aaKnown RBP eCLIP13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 DNAJC19Q96DA6 116 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 C18orf8Q96DM3 657 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 MRRFQ96E11 262 aaKnown RBP13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 MTMR9Q96QG7 549 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 GANQ9H2C0 597 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 PHRF1Q9P1Y6 1649 aaKnown RBP13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 CHMP2AO43633 222 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 C21orf2O43822 256 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 SNX1Q13596 522 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 LONRF1Q17RB8 773 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 WLSQ5T9L3 541 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 INTS8Q75QN2 995 aaKnown RBP13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 IRF2BP2Q7Z5L9 587 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 MTUS1Q9ULD2 1270 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 DNAJC8O75937 253 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 KCNJ1P48048 391 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 ADCY2Q08462 1091 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 SEPT2Q15019 361 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 TRIP13Q15645 432 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 DPP8Q6V1X1 898 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 FAM47EQ6ZV65 393 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 NT5DC3Q86UY8 548 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 MYCT1Q8N699 235 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 AGAP11Q8TF27 550 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 TNS2Q63HR2 1409 aa13.87□□□□□ -0.19
TRAPPC9-208ENST00000520857 DDX3XO00571 662 aaKnown RBP eCLIP13.86□□□□□ -0.199e-7■■■□□ 18.6
TRAPPC9-208ENST00000520857 NR3C1P04150 777 aa13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 MYBP10242 640 aa13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 CASP5P51878 434 aa13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 KNOP1Q1ED39 458 aaKnown RBP13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 GRIPAP1Q4V328 841 aa13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 ZNF746Q6NUN9 644 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 INTS5Q6P9B9 1019 aaKnown RBP13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 NKIRAS1Q9NYS0 192 aa13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 KLHL14Q9P2G3 628 aa13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 DNAJC12Q9UKB3 198 aa13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 DUOX1Q9NRD9 1551 aa13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 ADAMTS7Q9UKP4 1686 aa13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 FER1L4A9Z1Z3 1794 aa13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 LMNB1P20700 586 aa13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 SSR1P43307 286 aaKnown RBP13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 DRAP1Q14919 205 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 TTBK2Q6IQ55 1244 aa13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 HS2ST1Q7LGA3 356 aa13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 RFFLQ8WZ73 363 aa13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 ARHGEF2Q92974 986 aaKnown RBP13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 HOOK2Q96ED9 719 aa13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 CAMTA1Q9Y6Y1 1673 aa13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 HSPA2P54652 639 aa13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 TAF11Q15544 211 aa13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 CAPRIN2Q6IMN6 1127 aaKnown RBP13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 FAM186BQ8IYM0 893 aa13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 TRIM7Q9C029 511 aa13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 BHMT2Q9H2M3 363 aa13.86□□□□□ -0.19
TRAPPC9-208ENST00000520857 TMEM59LQ9UK28 342 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms