RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 KCNMA1Q12791 1236 aa10.92□□□□□ -0.66
SPARC-202ENST00000520687 KCNH2Q12809 1159 aa10.92□□□□□ -0.66
SPARC-202ENST00000520687 MTMR1Q13613 665 aa10.92□□□□□ -0.66
SPARC-202ENST00000520687 BMS1Q14692 1282 aaKnown RBP10.92□□□□□ -0.66
SPARC-202ENST00000520687 PAPD7Q5XG87 772 aaKnown RBP10.92□□□□□ -0.66
SPARC-202ENST00000520687 IQCEQ6IPM2 695 aa10.92□□□□□ -0.66
SPARC-202ENST00000520687 ZNF720Q7Z2F6 126 aa10.92□□□□□ -0.66
SPARC-202ENST00000520687 NLRX1Q86UT6 975 aa10.92□□□□□ -0.66
SPARC-202ENST00000520687 FAM178BQ8IXR5 827 aa10.92□□□□□ -0.66
SPARC-202ENST00000520687 CCDC155Q8N6L0 562 aa10.92□□□□□ -0.66
SPARC-202ENST00000520687 GPRASP2Q96D09 838 aa10.92□□□□□ -0.66
SPARC-202ENST00000520687 ARID3AQ99856 593 aa10.92□□□□□ -0.66
SPARC-202ENST00000520687 SENP7Q9BQF6 1050 aa10.92□□□□□ -0.66
SPARC-202ENST00000520687 ST6GALNAC4Q9H4F1 302 aa10.92□□□□□ -0.66
SPARC-202ENST00000520687 TMEM206Q9H813 350 aa10.92□□□□□ -0.66
SPARC-202ENST00000520687 ANKEF1Q9NU02 776 aa10.92□□□□□ -0.66
SPARC-202ENST00000520687 LARSQ9P2J5 1176 aaKnown RBP10.92□□□□□ -0.66
SPARC-202ENST00000520687 PCDHA13Q9Y5I0 950 aa10.92□□□□□ -0.66
SPARC-202ENST00000520687 DHX15O43143 795 aaKnown RBP10.91□□□□□ -0.66
SPARC-202ENST00000520687 GFPT2O94808 682 aa10.91□□□□□ -0.66
SPARC-202ENST00000520687 PTPRAP18433 802 aa10.91□□□□□ -0.66
SPARC-202ENST00000520687 MCM3P25205 808 aa10.91□□□□□ -0.66
SPARC-202ENST00000520687 CCND2P30279 289 aa10.91□□□□□ -0.66
SPARC-202ENST00000520687 KLK7P49862 253 aa10.91□□□□□ -0.66
SPARC-202ENST00000520687 KIF11P52732 1056 aa10.91□□□□□ -0.66
SPARC-202ENST00000520687 MTMR2Q13614 643 aa10.91□□□□□ -0.66
SPARC-202ENST00000520687 COG2Q14746 738 aa10.91□□□□□ -0.66
SPARC-202ENST00000520687 BRD3Q15059 726 aa10.91□□□□□ -0.66
SPARC-202ENST00000520687 PPP2R5AQ15172 486 aa10.91□□□□□ -0.66
SPARC-202ENST00000520687 GBP6Q6ZN66 633 aa10.91□□□□□ -0.66
SPARC-202ENST00000520687 RNF207Q6ZRF8 634 aa10.91□□□□□ -0.66
SPARC-202ENST00000520687 C12orf56Q8IXR9 622 aa10.91□□□□□ -0.66
SPARC-202ENST00000520687 C4orf19Q8IY42 314 aa10.91□□□□□ -0.66
SPARC-202ENST00000520687 SECISBP2LQ93073 1101 aaKnown RBP10.91□□□□□ -0.66
SPARC-202ENST00000520687 EEF2KMTQ96G04 330 aa10.91□□□□□ -0.66
SPARC-202ENST00000520687 TRERF1Q96PN7 1200 aa10.91□□□□□ -0.66
SPARC-202ENST00000520687 LXNQ9BS40 222 aa10.91□□□□□ -0.66
SPARC-202ENST00000520687 LSM14BQ9BX40 385 aaKnown RBP10.91□□□□□ -0.66
SPARC-202ENST00000520687 IFIH1Q9BYX4 1025 aaKnown RBP10.91□□□□□ -0.66
SPARC-202ENST00000520687 HOXC10Q9NYD6 342 aa10.91□□□□□ -0.66
SPARC-202ENST00000520687 TMOD4Q9NZQ9 345 aa10.91□□□□□ -0.66
SPARC-202ENST00000520687 ARHGAP20Q9P2F6 1191 aa10.91□□□□□ -0.66
SPARC-202ENST00000520687 DDX41Q9UJV9 622 aaKnown RBP10.91□□□□□ -0.66
SPARC-202ENST00000520687 GUCA1BQ9UMX6 200 aa10.91□□□□□ -0.66
SPARC-202ENST00000520687 JRKLQ9Y4A0 524 aa10.91□□□□□ -0.66
SPARC-202ENST00000520687 CTAGE15A4D2H0 777 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 LRRC53A6NM62 1247 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 WDR64B1ANS9 1081 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 GPR25O00155 361 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 NFIBO00712 420 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 MAPK13O15264 365 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 CHMP2AO43633 222 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 PRPF6O94906 941 aaKnown RBP10.9□□□□□ -0.66
SPARC-202ENST00000520687 CTAGE8P0CG41 777 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 MYBP10242 640 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 RFX1P22670 979 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 DSG3P32926 999 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 HOXD13P35453 343 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 EIF4A3P38919 411 aaKnown RBP10.9□□□□□ -0.66
SPARC-202ENST00000520687 MAGEA1P43355 309 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 PSMC5P62195 406 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 RPS6P62753 249 aaKnown RBP10.9□□□□□ -0.66
SPARC-202ENST00000520687 AMPD2Q01433 879 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 RAD51AP2Q09MP3 1159 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 SPP2Q13103 211 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 EXOC3L4Q17RC7 722 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 ASTE1Q2TB18 679 aaPredicted RBP10.9□□□□□ -0.66
SPARC-202ENST00000520687 TBC1D10BQ4KMP7 808 aaPredicted RBP10.9□□□□□ -0.66
SPARC-202ENST00000520687 NBPF12Q5TAG4 269 aaPredicted RBP10.9□□□□□ -0.66
SPARC-202ENST00000520687 ZNF746Q6NUN9 644 aaPredicted RBP10.9□□□□□ -0.66
SPARC-202ENST00000520687 TMCO3Q6UWJ1 677 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 SAMD7Q7Z3H4 446 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 CTAGE6Q86UF2 777 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 CTAGE4Q8IX94 777 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 NSUN6Q8TEA1 469 aaKnown RBP10.9□□□□□ -0.66
SPARC-202ENST00000520687 PIGOQ8TEQ8 1089 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 HVCN1Q96D96 273 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 DRC1Q96MC2 740 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 ALS2CR12Q96Q35 445 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 RMDN3Q96TC7 470 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 PDCD2LQ9BRP1 358 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 STRA6Q9BX79 667 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 FGFBP2Q9BYJ0 223 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 IRX2Q9BZI1 471 aaPredicted RBP10.9□□□□□ -0.66
SPARC-202ENST00000520687 GBP3Q9H0R5 595 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 RAVER2Q9HCJ3 691 aaKnown RBP10.9□□□□□ -0.66
SPARC-202ENST00000520687 PXMP2Q9NR77 195 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 DMAC2Q9NW81 257 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 FRMD4BQ9Y2L6 1034 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 SAR1BQ9Y6B6 198 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 MKI67P46013 3256 aaKnown RBP10.9□□□□□ -0.66
SPARC-202ENST00000520687 COL6A3P12111 3177 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 ASTN1O14525 1302 aa10.9□□□□□ -0.66
SPARC-202ENST00000520687 BTNL10A8MVZ5 291 aa10.9□□□□□ -0.67
SPARC-202ENST00000520687 N4BP1O75113 896 aaKnown RBP10.9□□□□□ -0.67
SPARC-202ENST00000520687 NOL4O94818 638 aa10.9□□□□□ -0.67
SPARC-202ENST00000520687 CCDC172P0C7W6 258 aa10.9□□□□□ -0.67
SPARC-202ENST00000520687 CASP5P51878 434 aa10.9□□□□□ -0.67
SPARC-202ENST00000520687 NAA30Q147X3 362 aaPredicted RBP10.9□□□□□ -0.67
SPARC-202ENST00000520687 PGM5Q15124 567 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms