RNA–Protein interactions for RNA: ENST00000518542.1

CSGALNACT1-206, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-206ENST00000518542 LMBR1Q8WVP7 490 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 CALML4Q96GE6 196 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 LRCH3Q96II8 777 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 SPATA32Q96LK8 384 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 NACC1Q96RE7 527 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 NIFKQ9BYG3 293 aaKnown RBP8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 NT5C3AQ9H0P0 336 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 TRPV6Q9H1D0 765 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 TRMT13Q9NUP7 481 aaKnown RBP8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 TMEM39AQ9NV64 488 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 SETD4Q9NVD3 440 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 SEPT9Q9UHD8 586 aaPredicted RBP8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 FBXO2Q9UK22 296 aaPredicted RBP8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 PPME1Q9Y570 386 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 NR2E3Q9Y5X4 410 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 LAMA3Q16787 3333 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 MAGEB2O15479 319 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CUTAO60888 179 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 MED24O75448 989 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CD4P01730 458 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 RPLP2P05387 115 aaKnown RBP8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 SPATA31C1P0DKV0 1188 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 XRCC6P12956 609 aaKnown RBP eCLIP8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 KLRC1P26715 233 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CDC25AP30304 524 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 HOXC8P31273 242 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 YWHABP31946 246 aaKnown RBP8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 TBC1D8BQ0IIM8 1120 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 FAAP100Q0VG06 881 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 PTK7Q13308 1070 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 BFSP2Q13515 415 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 ZRSR1Q15695 479 aaKnown RBP8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 TSR1Q2NL82 804 aaKnown RBP8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 MTERF2Q49AM1 385 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 XKR9Q5GH70 373 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 TAF2Q6P1X5 1199 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 RSPH3Q86UC2 560 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CABP7Q86V35 215 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 GPIHBP1Q8IV16 184 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 C7orf61Q8IZ16 206 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 KCTD17Q8N5Z5 321 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 RETREG2Q8NC44 543 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CEP170P1Q96L14 293 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 HS3ST6Q96QI5 342 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 JPH2Q9BR39 696 aaPredicted RBP8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CSRNP2Q9H175 543 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 PRDM5Q9NQX1 630 aaPredicted RBP8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 ANKEF1Q9NU02 776 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CCDC39Q9UFE4 941 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 TUBE1Q9UJT0 475 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 RCOR1Q9UKL0 485 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 DNM3Q9UQ16 869 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 ARID2Q68CP9 1835 aa8.58□□□□□ -1.04
CSGALNACT1-206ENST00000518542 MBLAC1A4D2B0 266 aaPredicted RBP8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 PP2D1A8MPX8 630 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 TREHO43280 583 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CYP2C9P11712 490 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 RAG1P15918 1043 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 TMOD1P28289 359 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 DNM2P50570 870 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 ADAM17P78536 824 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 ZNF200P98182 395 aaPredicted RBP8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CSPP1Q1MSJ5 1256 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 SPECC1Q5M775 1068 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 POTEGQ6S5H5 508 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 MTHFD1LQ6UB35 978 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 ANO5Q75V66 913 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 SERINC5Q86VE9 423 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 METTL13Q8N6R0 699 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CAGE1Q8TC20 777 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 PIGOQ8TEQ8 1089 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 LEO1Q8WVC0 666 aaPredicted RBP8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 TRAPPC12Q8WVT3 735 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 SYMPKQ92797 1274 aaKnown RBP8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CLIC6Q96NY7 704 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 GBP4Q96PP9 640 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CCSER1Q9C0I3 900 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CDHR5Q9HBB8 845 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 PDLIM7Q9NR12 457 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CYP26B1Q9NR63 512 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 DDX19AQ9NUU7 478 aaKnown RBP8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 WRAP73Q9P2S5 460 aaPredicted RBP8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 KIAA1024Q9UPX6 916 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 PCDHA2Q9Y5H9 948 aa8.57□□□□□ -1.04
CSGALNACT1-206ENST00000518542 SMIM35A0A1B0GVV1 85 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 A0A1W2PPC1 479 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 ARHGEF35A5YM69 484 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 GOLGA6L4A6NEF3 574 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 ZBTB42B2RXF5 422 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 M0QZ92 97 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 KIAA0355O15063 1070 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 GAS2O43903 313 aaKnown RBP8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CAND2O75155 1236 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 MAFO75444 373 aaPredicted RBP8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 STBD1O95210 358 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 C22orf31O95567 290 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 RFC5P40937 340 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 POLGP54098 1239 aaPredicted RBP8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 NPEPPSP55786 919 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 GRIN1Q05586 938 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms