RNA–Protein interactions for RNA: ENST00000517211.2

RN7SKP40-201, Transcript of RNA, 7SK small nuclear pseudogene 40, humanhuman

BASIC

Gene RN7SKP40, Length 242 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP40-201ENST00000517211 STAG1Q8WVM7 1258 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 C8orf48Q96LL4 319 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 ZNF778Q96MU6 729 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 TSPAN18Q96SJ8 248 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 PAGR1Q9BTK6 254 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 LGR4Q9BXB1 951 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 SLC29A3Q9BZD2 475 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 TYW1Q9NV66 732 aaKnown RBP3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 MAP3K20Q9NYL2 800 aaKnown RBP3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 WHRNQ9P202 907 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 SFMBT1Q9UHJ3 866 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 PUF60Q9UHX1 559 aaKnown RBP3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 NRBP1Q9UHY1 535 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 PCDHB10Q9UN67 800 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 SUPT16HQ9Y5B9 1047 aaKnown RBP3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 SCINQ9Y6U3 715 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 POLR2AP24928 1970 aaKnown RBP3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 RPGRIP1LQ68CZ1 1315 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 GOLIM4O00461 696 aa3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 ENPP3O14638 875 aa3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 PPP1R12AO14974 1030 aaPredicted RBP3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 DHX16O60231 1041 aaKnown RBP3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 EPHX1P07099 455 aa3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 PDGFRBP09619 1106 aa3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 HHEXQ03014 270 aa3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 RBL2Q08999 1139 aa3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 NFE2L2Q16236 605 aa3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 PRR16Q569H4 304 aa3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 CCDC174Q6PII3 467 aa3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 GET4Q7L5D6 327 aaPredicted RBP3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 CREBRFQ8IUR6 639 aa3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 ARHGEF39Q8N4T4 335 aa3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 C1orf131Q8NDD1 294 aaKnown RBP3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 PROKR1Q8TCW9 393 aa3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 FRS2Q8WU20 508 aa3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 SMG7Q92540 1137 aaKnown RBP3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 IL17RAQ96F46 866 aa3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 MRFAP1L1Q96HT8 127 aa3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 GMLQ99445 158 aa3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 CHMP4BQ9H444 224 aaKnown RBP3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 MYOTQ9UBF9 498 aa3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 ADAMTS1Q9UHI8 967 aa3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 ZNF214Q9UL59 606 aaPredicted RBP3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 PRKAB1Q9Y478 270 aa3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 TIMM13Q9Y5L4 95 aaPredicted RBP3.4□□□□□ -1.87
RN7SKP40-201ENST00000517211 SLC27A2O14975 620 aa3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 TIMM44O43615 452 aa3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 LDHAP00338 332 aaKnown RBP3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 FOSP01100 380 aaPredicted RBP3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 LTFP02788 710 aa3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 CHGBP05060 677 aa3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 VIL1P09327 827 aaKnown RBP3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 VDRP11473 427 aa3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 ABCG1P45844 678 aa3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 RPL11P62913 178 aaKnown RBP3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 HDAC1Q13547 482 aaPredicted RBP3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 ZRSR2Q15696 482 aaKnown RBP3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 EFCAB2Q5VUJ9 269 aa3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 NBPF6Q5VWK0 638 aa3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 HS2ST1Q7LGA3 356 aa3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 ERMP1Q7Z2K6 904 aa3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 HDGFL2Q7Z4V5 671 aaPredicted RBP3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 ZC3H7AQ8IWR0 971 aaKnown RBP3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 DRC7Q8IY82 874 aa3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 PAF1Q8N7H5 531 aa3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 SPATA3Q8NHX4 192 aa3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 SLC25A43Q8WUT9 341 aaPredicted RBP3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 PPM1EQ8WY54 764 aa3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 TMEM169Q96HH4 297 aa3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 NBPF4Q96M43 638 aa3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 MPHOSPH6Q99547 160 aaKnown RBP3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 ZHX3Q9H4I2 956 aa3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 HSPBP1Q9NZL4 362 aa3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 ARAP1Q96P48 1450 aa3.39□□□□□ -1.87
RN7SKP40-201ENST00000517211 GOLGA6CA6NDK9 693 aa3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 GOLGA6BA6NDN3 693 aa3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 IFRD1O00458 451 aaPredicted RBP3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 TCERG1O14776 1098 aaKnown RBP3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 NPHP1O15259 732 aa3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 GOLGA6DP0CG33 693 aa3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 PTGS2P35354 604 aa3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 ZNF165P49910 485 aa3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 ARID5AQ03989 594 aa3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 NFYCQ13952 458 aa3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 ACAP1Q15027 740 aa3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 BRD3Q15059 726 aa3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 MAP9Q49MG5 647 aa3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 KLHL22Q53GT1 634 aa3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 EMC4Q5J8M3 183 aa3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 FAM98AQ8NCA5 519 aaKnown RBP3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 OR14K1Q8NGZ2 314 aa3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 RUNDC1Q96C34 613 aa3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 RSPH9Q9H1X1 276 aaPredicted RBP3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 SLKQ9H2G2 1235 aaPredicted RBP3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 TMX1Q9H3N1 280 aa3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 ACBD3Q9H3P7 528 aa3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 TOR3AQ9H497 397 aa3.38□□□□□ -1.87
RN7SKP40-201ENST00000517211 GOLGA6AQ9NYA3 693 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms