RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 VTA1Q9NP79 307 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 NRBP1Q9UHY1 535 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 KIF3AQ9Y496 699 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ZNFX1Q9P2E3 1918 aaKnown RBP6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 MGAMO43451 1857 aa6.6□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CCDC194A0A1B0GVG4 234 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 BTBD18B2RXH4 712 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 H3BQV1 296 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 GIPC1O14908 333 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CAPN5O15484 640 aaPredicted RBP6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 SEPT4O43236 478 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 DYNC1LI2O43237 492 aaPredicted RBP6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 MSCO60682 206 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 GJB1P08034 283 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 TXNP10599 105 aaKnown RBP6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 RARBP10826 455 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CYBAP13498 195 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 EDNRBP24530 442 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 KRT2P35908 639 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 SOX10P56693 466 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 MRPS9P82933 396 aaKnown RBP6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CUL4AQ13619 759 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 GNL2Q13823 731 aaKnown RBP6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 TTLL4Q14679 1199 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 MCTP2Q6DN12 878 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 TAPT1Q6NXT6 567 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 XRRA1Q6P2D8 792 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 LRRC69Q6ZNQ3 347 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 NLRX1Q86UT6 975 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 TEX2Q8IWB9 1127 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 FAM177A1Q8N128 213 aaPredicted RBP6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 SLC43A3Q8NBI5 491 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 IL31RAQ8NI17 732 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 MORC4Q8TE76 937 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 U2AF1L4Q8WU68 220 aaKnown RBP6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 SCFD2Q8WU76 684 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 PHF20Q9BVI0 1012 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 OSBPL7Q9BZF2 842 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 SPC25Q9HBM1 224 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 DDX20Q9UHI6 824 aaKnown RBP6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 KCNMB2Q9Y691 235 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 MRVI1Q9Y6F6 885 aa6.59□□□□□ -1.35
SCARNA6.1-201ENST00000516989 MYH6P13533 1939 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 PLXNB2O15031 1838 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 PHACTR2O75167 634 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 DUSP11O75319 330 aaKnown RBP6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 STAM2O75886 525 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 PGK1P00558 417 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 MMP1P03956 469 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 BMP2P12643 396 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 EN2P19622 333 aaPredicted RBP6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 ATP2B1P20020 1258 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 ATP4AP20648 1035 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 IRS1P35568 1242 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 GJA8P48165 433 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 BECN1Q14457 450 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 NONOQ15233 471 aaKnown RBP eCLIP6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 TRIP4Q15650 581 aaPredicted RBP6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 LY6KQ17RY6 165 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 INF2Q27J81 1249 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 GNPTABQ3T906 1256 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 DUSP28Q4G0W2 176 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 WDR44Q5JSH3 913 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 TMEM63BQ5T3F8 832 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 GJC2Q5T442 439 aaPredicted RBP6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 PCNX4Q63HM2 1172 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 MCTP1Q6DN14 999 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 PDE12Q6L8Q7 609 aaKnown RBP6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 KCNV1Q6PIU1 500 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 PIK3AP1Q6ZUJ8 805 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 LYSMD3Q7Z3D4 306 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 KRT25Q7Z3Z0 450 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 DIS3L2Q8IYB7 885 aaKnown RBP6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 DAGLBQ8NCG7 672 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 ARRDC4Q8NCT1 418 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 FBXO18Q8NFZ0 1043 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 CYP2W1Q8TAV3 490 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 TBCKQ8TEA7 893 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 SNX29Q8TEQ0 813 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 COPS5Q92905 334 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 INTS4Q96HW7 963 aaKnown RBP6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 KATNBL1Q9H079 304 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 AP5M1Q9H0R1 490 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 MLXIPQ9HAP2 919 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 JADE2Q9NQC1 790 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 XPNPEP3Q9NQH7 507 aa6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 PAK6Q9NQU5 681 aaPredicted RBP6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 DDX41Q9UJV9 622 aaKnown RBP6.58□□□□□ -1.36
SCARNA6.1-201ENST00000516989 MAFGO15525 162 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 MARCH6O60337 910 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 ATP9AO75110 1047 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 RGS20O76081 388 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 ARIH2O95376 493 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 CYP3A4P08684 503 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 C6orf222P0C671 652 aaPredicted RBP6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 ARP10275 920 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 TGFB3P10600 412 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 RHOQP17081 205 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms