RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 ETNPPLQ8TBG4 499 aa19.71■□□□□ 0.75
DDX41-217ENST00000515562 NECAB3Q96P71 396 aaPredicted RBP19.71■□□□□ 0.75
DDX41-217ENST00000515562 PPP1R16BQ96T49 567 aa19.71■□□□□ 0.75
DDX41-217ENST00000515562 CDHR5Q9HBB8 845 aa19.71■□□□□ 0.75
DDX41-217ENST00000515562 DDX25Q9UHL0 483 aaKnown RBP19.71■□□□□ 0.75
DDX41-217ENST00000515562 ST3GAL5Q9UNP4 418 aa19.71■□□□□ 0.75
DDX41-217ENST00000515562 AKT3Q9Y243 479 aa19.71■□□□□ 0.75
DDX41-217ENST00000515562 MRPL42Q9Y6G3 142 aaKnown RBP19.71■□□□□ 0.75
DDX41-217ENST00000515562 KIAA1671Q9BY89 1806 aa19.71■□□□□ 0.75
DDX41-217ENST00000515562 BRWD1Q9NSI6 2320 aa19.7■□□□□ 0.74
DDX41-217ENST00000515562 NCOR1O75376 2440 aa19.7■□□□□ 0.74
DDX41-217ENST00000515562 CCDC194A0A1B0GVG4 234 aa19.7■□□□□ 0.74
DDX41-217ENST00000515562 GPR32O75388 356 aa19.7■□□□□ 0.74
DDX41-217ENST00000515562 KCNA5P22460 613 aa19.7■□□□□ 0.74
DDX41-217ENST00000515562 UGCGQ16739 394 aa19.7■□□□□ 0.74
DDX41-217ENST00000515562 INF2Q27J81 1249 aa19.7■□□□□ 0.74
DDX41-217ENST00000515562 LEXMQ3ZCV2 418 aa19.7■□□□□ 0.74
DDX41-217ENST00000515562 NAALADL2Q58DX5 795 aa19.7■□□□□ 0.74
DDX41-217ENST00000515562 EFCAB12Q6NXP0 572 aa19.7■□□□□ 0.74
DDX41-217ENST00000515562 B3GNT9Q6UX72 402 aa19.7■□□□□ 0.74
DDX41-217ENST00000515562 SLC24A5Q71RS6 500 aa19.7■□□□□ 0.74
DDX41-217ENST00000515562 LINC01465Q8N7H1 131 aa19.7■□□□□ 0.74
DDX41-217ENST00000515562 WASF1Q92558 559 aa19.7■□□□□ 0.74
DDX41-217ENST00000515562 P2RX5Q93086 422 aa19.7■□□□□ 0.74
DDX41-217ENST00000515562 GJA10Q969M2 543 aa19.7■□□□□ 0.74
DDX41-217ENST00000515562 ADAM2Q99965 735 aa19.7■□□□□ 0.74
DDX41-217ENST00000515562 RGS18Q9NS28 235 aa19.7■□□□□ 0.74
DDX41-217ENST00000515562 KCNJ14Q9UNX9 436 aa19.7■□□□□ 0.74
DDX41-217ENST00000515562 PCDHB7Q9Y5E2 793 aa19.7■□□□□ 0.74
DDX41-217ENST00000515562 ATG2AQ2TAZ0 1938 aa19.69■□□□□ 0.74
DDX41-217ENST00000515562 MGEA5O60502 916 aa19.69■□□□□ 0.74
DDX41-217ENST00000515562 GCFC2P16383 781 aaKnown RBP19.69■□□□□ 0.74
DDX41-217ENST00000515562 AK2P54819 239 aa19.69■□□□□ 0.74
DDX41-217ENST00000515562 TBC1D8BQ0IIM8 1120 aa19.69■□□□□ 0.74
DDX41-217ENST00000515562 TCEAL5Q5H9L2 206 aa19.69■□□□□ 0.74
DDX41-217ENST00000515562 NEK8Q86SG6 692 aa19.69■□□□□ 0.74
DDX41-217ENST00000515562 FAM228AQ86W67 206 aa19.69■□□□□ 0.74
DDX41-217ENST00000515562 NAP1L4Q99733 375 aaKnown RBP19.69■□□□□ 0.74
DDX41-217ENST00000515562 GRM6O15303 877 aa19.68■□□□□ 0.74
DDX41-217ENST00000515562 NCK2O43639 380 aa19.68■□□□□ 0.74
DDX41-217ENST00000515562 MMP1P03956 469 aa19.68■□□□□ 0.74
DDX41-217ENST00000515562 NLRP11P59045 1033 aaKnown RBP19.68■□□□□ 0.74
DDX41-217ENST00000515562 COL19A1Q14993 1142 aa19.68■□□□□ 0.74
DDX41-217ENST00000515562 LETM2Q2VYF4 491 aa19.68■□□□□ 0.74
DDX41-217ENST00000515562 PAN2Q504Q3 1202 aaKnown RBP19.68■□□□□ 0.74
DDX41-217ENST00000515562 XKR3Q5GH77 459 aa19.68■□□□□ 0.74
DDX41-217ENST00000515562 LRRC71Q8N4P6 559 aa19.68■□□□□ 0.74
DDX41-217ENST00000515562 PABPC5Q96DU9 382 aaKnown RBP19.68■□□□□ 0.74
DDX41-217ENST00000515562 SEPT9Q9UHD8 586 aaPredicted RBP19.68■□□□□ 0.74
DDX41-217ENST00000515562 C9IYK1 514 aa19.67■□□□□ 0.74
DDX41-217ENST00000515562 SLC37A4O43826 429 aa19.67■□□□□ 0.74
DDX41-217ENST00000515562 PUS10Q3MIT2 529 aaKnown RBP19.67■□□□□ 0.74
DDX41-217ENST00000515562 PPP4R3AQ6IN85 833 aa19.67■□□□□ 0.74
DDX41-217ENST00000515562 FAM20AQ96MK3 541 aa19.67■□□□□ 0.74
DDX41-217ENST00000515562 SCLT1Q96NL6 688 aa19.67■□□□□ 0.74
DDX41-217ENST00000515562 NIFKQ9BYG3 293 aaKnown RBP19.67■□□□□ 0.74
DDX41-217ENST00000515562 ADAMTS10Q9H324 1103 aa19.67■□□□□ 0.74
DDX41-217ENST00000515562 TMEM161AQ9NX61 479 aa19.67■□□□□ 0.74
DDX41-217ENST00000515562 ORC3Q9UBD5 711 aaPredicted RBP19.67■□□□□ 0.74
DDX41-217ENST00000515562 CTDNEP1O95476 244 aa19.66■□□□□ 0.74
DDX41-217ENST00000515562 IBSPP21815 317 aaPredicted RBP19.66■□□□□ 0.74
DDX41-217ENST00000515562 EIF4BP23588 611 aaKnown RBP19.66■□□□□ 0.74
DDX41-217ENST00000515562 GPC3P51654 580 aa19.66■□□□□ 0.74
DDX41-217ENST00000515562 TARBP2Q15633 366 aaKnown RBP19.66■□□□□ 0.74
DDX41-217ENST00000515562 NEK9Q8TD19 979 aa19.66■□□□□ 0.74
DDX41-217ENST00000515562 GTF3C6Q969F1 213 aa19.66■□□□□ 0.74
DDX41-217ENST00000515562 ELAC1Q9H777 363 aaKnown RBP19.66■□□□□ 0.74
DDX41-217ENST00000515562 BRMS1Q9HCU9 246 aa19.66■□□□□ 0.74
DDX41-217ENST00000515562 KCNMB3Q9NPA1 279 aa19.66■□□□□ 0.74
DDX41-217ENST00000515562 PLAGL2Q9UPG8 496 aa19.66■□□□□ 0.74
DDX41-217ENST00000515562 BDP1A6H8Y1 2624 aa19.65■□□□□ 0.74
DDX41-217ENST00000515562 FNDC1Q4ZHG4 1894 aaPredicted RBP19.65■□□□□ 0.74
DDX41-217ENST00000515562 TBX3O15119 743 aa19.65■□□□□ 0.74
DDX41-217ENST00000515562 GATMP50440 423 aa19.65■□□□□ 0.74
DDX41-217ENST00000515562 PSMC5P62195 406 aa19.65■□□□□ 0.74
DDX41-217ENST00000515562 CDC42EP1Q00587 391 aa19.65■□□□□ 0.74
DDX41-217ENST00000515562 PPP2R5CQ13362 524 aa19.65■□□□□ 0.74
DDX41-217ENST00000515562 DSC3Q14574 896 aa19.65■□□□□ 0.74
DDX41-217ENST00000515562 MTERF2Q49AM1 385 aa19.65■□□□□ 0.74
DDX41-217ENST00000515562 PIK3AP1Q6ZUJ8 805 aa19.65■□□□□ 0.74
DDX41-217ENST00000515562 PPP2R3CQ969Q6 453 aa19.65■□□□□ 0.74
DDX41-217ENST00000515562 ATP6V0A4Q9HBG4 840 aa19.65■□□□□ 0.74
DDX41-217ENST00000515562 AAASQ9NRG9 546 aa19.65■□□□□ 0.74
DDX41-217ENST00000515562 TBKBP1A7MCY6 615 aa19.64■□□□□ 0.73
DDX41-217ENST00000515562 HOXA2O43364 376 aa19.64■□□□□ 0.73
DDX41-217ENST00000515562 CCNT1O60563 726 aaKnown RBP19.64■□□□□ 0.73
DDX41-217ENST00000515562 DKC1O60832 514 aaKnown RBP eCLIP19.64■□□□□ 0.73
DDX41-217ENST00000515562 ITGB1P05556 798 aa19.64■□□□□ 0.73
DDX41-217ENST00000515562 DARSP14868 501 aaKnown RBP19.64■□□□□ 0.73
DDX41-217ENST00000515562 ZSCAN20P17040 1043 aaPredicted RBP19.64■□□□□ 0.73
DDX41-217ENST00000515562 DNM2P50570 870 aa19.64■□□□□ 0.73
DDX41-217ENST00000515562 PTCRAQ6ISU1 281 aaPredicted RBP19.64■□□□□ 0.73
DDX41-217ENST00000515562 KLHL23Q8NBE8 558 aa19.64■□□□□ 0.73
DDX41-217ENST00000515562 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.64■□□□□ 0.73
DDX41-217ENST00000515562 OXER1Q8TDS5 423 aa19.64■□□□□ 0.73
DDX41-217ENST00000515562 NLRP7Q8WX94 980 aa19.64■□□□□ 0.73
DDX41-217ENST00000515562 JPH2Q9BR39 696 aaPredicted RBP19.64■□□□□ 0.73
DDX41-217ENST00000515562 ALG13Q9NP73 1137 aaKnown RBP19.64■□□□□ 0.73
DDX41-217ENST00000515562 GJB4Q9NTQ9 266 aa19.64■□□□□ 0.73
DDX41-217ENST00000515562 CLDND1Q9NY35 253 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms