RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 LLPHQ9BRT6 129 aaKnown RBP27.53■■■□□ 2
SNF8-213ENST00000514929 TMX1Q9H3N1 280 aa27.53■■■□□ 2
SNF8-213ENST00000514929 ERVK-5Q9HDB9 667 aa27.53■■■□□ 2
SNF8-213ENST00000514929 ADGRA3Q8IWK6 1321 aa27.52■■■□□ 2
SNF8-213ENST00000514929 EML1O00423 815 aa27.52■■■□□ 2
SNF8-213ENST00000514929 GPR182O15218 404 aa27.52■■■□□ 2
SNF8-213ENST00000514929 GPR32O75388 356 aa27.52■■■□□ 2
SNF8-213ENST00000514929 RBM25P49756 843 aaKnown RBP27.52■■■□□ 2
SNF8-213ENST00000514929 NLRP11P59045 1033 aaKnown RBP27.52■■■□□ 2
SNF8-213ENST00000514929 PSMC5P62195 406 aa27.52■■■□□ 2
SNF8-213ENST00000514929 EPC2Q52LR7 807 aa27.52■■■□□ 2
SNF8-213ENST00000514929 LINC01465Q8N7H1 131 aa27.52■■■□□ 2
SNF8-213ENST00000514929 NIFKQ9BYG3 293 aaKnown RBP27.52■■■□□ 2
SNF8-213ENST00000514929 LMCD1Q9NZU5 365 aa27.52■■■□□ 2
SNF8-213ENST00000514929 ST3GAL5Q9UNP4 418 aa27.52■■■□□ 2
SNF8-213ENST00000514929 PRRC2BQ5JSZ5 2229 aaKnown RBP27.51■■□□□ 1.99
SNF8-213ENST00000514929 TMEM150BA6NC51 233 aa27.51■■□□□ 1.99
SNF8-213ENST00000514929 DDX11L8A8MPP1 907 aa27.51■■□□□ 1.99
SNF8-213ENST00000514929 STAG3L1P0CL83 205 aa27.51■■□□□ 1.99
SNF8-213ENST00000514929 SAFBQ15424 915 aaKnown RBP eCLIP27.51■■□□□ 1.99
SNF8-213ENST00000514929 TARBP2Q15633 366 aaKnown RBP27.51■■□□□ 1.99
SNF8-213ENST00000514929 FAM43BQ6ZT52 329 aaPredicted RBP27.51■■□□□ 1.99
SNF8-213ENST00000514929 NPAS4Q8IUM7 802 aa27.51■■□□□ 1.99
SNF8-213ENST00000514929 TMEM192Q8IY95 271 aa27.51■■□□□ 1.99
SNF8-213ENST00000514929 SLFN12Q8IYM2 578 aa27.51■■□□□ 1.99
SNF8-213ENST00000514929 ZNF710Q8N1W2 664 aa27.51■■□□□ 1.99
SNF8-213ENST00000514929 COL25A1Q9BXS0 654 aaPredicted RBP27.51■■□□□ 1.99
SNF8-213ENST00000514929 SH2B1Q9NRF2 756 aaPredicted RBP27.51■■□□□ 1.99
SNF8-213ENST00000514929 TTC3P53804 2025 aa27.5■■□□□ 1.99
SNF8-213ENST00000514929 DKC1O60832 514 aaKnown RBP eCLIP27.5■■□□□ 1.99
SNF8-213ENST00000514929 STBD1O95210 358 aa27.5■■□□□ 1.99
SNF8-213ENST00000514929 IBSPP21815 317 aaPredicted RBP27.5■■□□□ 1.99
SNF8-213ENST00000514929 QARSP47897 775 aaKnown RBP27.5■■□□□ 1.99
SNF8-213ENST00000514929 GUCY1B3Q02153 619 aa27.5■■□□□ 1.99
SNF8-213ENST00000514929 BTG3Q14201 252 aaPredicted RBP27.5■■□□□ 1.99
SNF8-213ENST00000514929 ATXN2LQ8WWM7 1075 aaKnown RBP27.5■■□□□ 1.99
SNF8-213ENST00000514929 SH2D3AQ9BRG2 576 aa27.5■■□□□ 1.99
SNF8-213ENST00000514929 LRFN2Q9ULH4 789 aa27.5■■□□□ 1.99
SNF8-213ENST00000514929 DENND3A2RUS2 1198 aa27.49■■□□□ 1.99
SNF8-213ENST00000514929 DGKIO75912 1065 aa27.49■■□□□ 1.99
SNF8-213ENST00000514929 P4HBP07237 508 aaKnown RBP27.49■■□□□ 1.99
SNF8-213ENST00000514929 NCAPH2Q6IBW4 605 aa27.49■■□□□ 1.99
SNF8-213ENST00000514929 FAM228AQ86W67 206 aa27.49■■□□□ 1.99
SNF8-213ENST00000514929 ZNF689Q96CS4 500 aaPredicted RBP27.49■■□□□ 1.99
SNF8-213ENST00000514929 C8orf76Q96K31 380 aa27.49■■□□□ 1.99
SNF8-213ENST00000514929 SCLT1Q96NL6 688 aa27.49■■□□□ 1.99
SNF8-213ENST00000514929 ADAM2Q99965 735 aa27.49■■□□□ 1.99
SNF8-213ENST00000514929 UPF2Q9HAU5 1272 aaKnown RBP27.49■■□□□ 1.99
SNF8-213ENST00000514929 RC3H2Q9HBD1 1191 aaKnown RBP27.49■■□□□ 1.99
SNF8-213ENST00000514929 HMGN5P82970 282 aaKnown RBP27.48■■□□□ 1.99
SNF8-213ENST00000514929 EPHA7Q15375 998 aa27.48■■□□□ 1.99
SNF8-213ENST00000514929 TJAP1Q5JTD0 557 aa27.48■■□□□ 1.99
SNF8-213ENST00000514929 ZNF668Q96K58 619 aaPredicted RBP27.48■■□□□ 1.99
SNF8-213ENST00000514929 ADAMTS10Q9H324 1103 aa27.48■■□□□ 1.99
SNF8-213ENST00000514929 MGEA5O60502 916 aa27.47■■□□□ 1.99
SNF8-213ENST00000514929 CTNNB1P35222 781 aa27.47■■□□□ 1.99
SNF8-213ENST00000514929 SARSP49591 514 aaKnown RBP27.47■■□□□ 1.99
SNF8-213ENST00000514929 DNM2P50570 870 aa27.47■■□□□ 1.99
SNF8-213ENST00000514929 GPM6BQ13491 265 aa27.47■■□□□ 1.99
SNF8-213ENST00000514929 RABEP1Q15276 862 aa27.47■■□□□ 1.99
SNF8-213ENST00000514929 CALCRLQ16602 461 aa27.47■■□□□ 1.99
SNF8-213ENST00000514929 ANO5Q75V66 913 aa27.47■■□□□ 1.99
SNF8-213ENST00000514929 CRIPAKQ8N1N5 446 aa27.47■■□□□ 1.99
SNF8-213ENST00000514929 FAM184AQ8NB25 1140 aa27.47■■□□□ 1.99
SNF8-213ENST00000514929 RGS18Q9NS28 235 aa27.47■■□□□ 1.99
SNF8-213ENST00000514929 C1orf112Q9NSG2 853 aa27.47■■□□□ 1.99
SNF8-213ENST00000514929 RNF216Q9NWF9 866 aaPredicted RBP27.47■■□□□ 1.99
SNF8-213ENST00000514929 RWDD3Q9Y3V2 267 aa27.47■■□□□ 1.99
SNF8-213ENST00000514929 NLRC5Q86WI3 1866 aa27.47■■□□□ 1.99
SNF8-213ENST00000514929 H3BNC9 293 aa27.46■■□□□ 1.99
SNF8-213ENST00000514929 NEMFO60524 1076 aa27.46■■□□□ 1.99
SNF8-213ENST00000514929 EIF4BP23588 611 aaKnown RBP27.46■■□□□ 1.99
SNF8-213ENST00000514929 GPC3P51654 580 aa27.46■■□□□ 1.99
SNF8-213ENST00000514929 MRPS5P82675 430 aaKnown RBP27.46■■□□□ 1.99
SNF8-213ENST00000514929 PLA2G4FQ68DD2 849 aa27.46■■□□□ 1.99
SNF8-213ENST00000514929 NLRP7Q8WX94 980 aa27.46■■□□□ 1.99
SNF8-213ENST00000514929 SYMPKQ92797 1274 aaKnown RBP27.46■■□□□ 1.99
SNF8-213ENST00000514929 CEP89Q96ST8 783 aa27.46■■□□□ 1.99
SNF8-213ENST00000514929 JPH2Q9BR39 696 aaPredicted RBP27.46■■□□□ 1.99
SNF8-213ENST00000514929 PCDHA12Q9UN75 941 aa27.46■■□□□ 1.99
SNF8-213ENST00000514929 PCDHB7Q9Y5E2 793 aa27.46■■□□□ 1.99
SNF8-213ENST00000514929 RALGAPA2Q2PPJ7 1873 aa27.46■■□□□ 1.99
SNF8-213ENST00000514929 REV3LO60673 3130 aa27.45■■□□□ 1.99
SNF8-213ENST00000514929 MAFO75444 373 aaPredicted RBP27.45■■□□□ 1.98
SNF8-213ENST00000514929 SPIRE1Q08AE8 756 aa27.45■■□□□ 1.98
SNF8-213ENST00000514929 DRP2Q13474 957 aa27.45■■□□□ 1.98
SNF8-213ENST00000514929 PTPROQ16827 1216 aa27.45■■□□□ 1.98
SNF8-213ENST00000514929 SLC24A5Q71RS6 500 aa27.45■■□□□ 1.98
SNF8-213ENST00000514929 CMTR2Q8IYT2 770 aaKnown RBP27.45■■□□□ 1.98
SNF8-213ENST00000514929 ASB2Q96Q27 587 aa27.45■■□□□ 1.98
SNF8-213ENST00000514929 LXNQ9BS40 222 aa27.45■■□□□ 1.98
SNF8-213ENST00000514929 CYP26B1Q9NR63 512 aa27.45■■□□□ 1.98
SNF8-213ENST00000514929 IGKV6-21A0A0C4DH24 114 aa27.44■■□□□ 1.98
SNF8-213ENST00000514929 ST18O60284 1047 aa27.44■■□□□ 1.98
SNF8-213ENST00000514929 ATP2B1P20020 1258 aa27.44■■□□□ 1.98
SNF8-213ENST00000514929 BMPR1AP36894 532 aa27.44■■□□□ 1.98
SNF8-213ENST00000514929 CDC42EP1Q00587 391 aa27.44■■□□□ 1.98
SNF8-213ENST00000514929 PAN2Q504Q3 1202 aaKnown RBP27.44■■□□□ 1.98
SNF8-213ENST00000514929 MRPL38Q96DV4 380 aaKnown RBP27.44■■□□□ 1.98
SNF8-213ENST00000514929 DYDC2Q96IM9 177 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms