RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 PRELPP51888 382 aa5.77□□□□□ -1.49
CLDND1-228ENST00000513873 NKX3-2P78367 333 aa5.77□□□□□ -1.49
CLDND1-228ENST00000513873 CACNB2Q08289 660 aaPredicted RBP5.77□□□□□ -1.49
CLDND1-228ENST00000513873 TCEA2Q15560 299 aa5.77□□□□□ -1.49
CLDND1-228ENST00000513873 CRY1Q16526 586 aa5.77□□□□□ -1.49
CLDND1-228ENST00000513873 TAF7LQ5H9L4 462 aa5.77□□□□□ -1.49
CLDND1-228ENST00000513873 EMC4Q5J8M3 183 aa5.77□□□□□ -1.49
CLDND1-228ENST00000513873 CC2D1BQ5T0F9 858 aaKnown RBP5.77□□□□□ -1.49
CLDND1-228ENST00000513873 CD300LDQ6UXZ3 194 aa5.77□□□□□ -1.49
CLDND1-228ENST00000513873 OTOP3Q7RTS5 596 aa5.77□□□□□ -1.49
CLDND1-228ENST00000513873 MORC1Q86VD1 984 aa5.77□□□□□ -1.49
CLDND1-228ENST00000513873 IGDCC3Q8IVU1 814 aa5.77□□□□□ -1.49
CLDND1-228ENST00000513873 FAM9BQ8IZU0 186 aa5.77□□□□□ -1.49
CLDND1-228ENST00000513873 PIP4K2CQ8TBX8 421 aa5.77□□□□□ -1.49
CLDND1-228ENST00000513873 CPA5Q8WXQ8 436 aa5.77□□□□□ -1.49
CLDND1-228ENST00000513873 CDK19Q9BWU1 502 aa5.77□□□□□ -1.49
CLDND1-228ENST00000513873 PNNQ9H307 717 aaKnown RBP5.77□□□□□ -1.49
CLDND1-228ENST00000513873 SLC52A2Q9HAB3 445 aa5.77□□□□□ -1.49
CLDND1-228ENST00000513873 PPARGC1AQ9UBK2 798 aaKnown RBP5.77□□□□□ -1.49
CLDND1-228ENST00000513873 DSEQ9UL01 958 aa5.77□□□□□ -1.49
CLDND1-228ENST00000513873 INSRP06213 1382 aa5.77□□□□□ -1.49
CLDND1-228ENST00000513873 USP32Q8NFA0 1604 aa5.77□□□□□ -1.49
CLDND1-228ENST00000513873 PXDNQ92626 1479 aa5.77□□□□□ -1.49
CLDND1-228ENST00000513873 A0A0G2JLL6 359 aaPredicted RBP5.76□□□□□ -1.49
CLDND1-228ENST00000513873 TADA3O75528 432 aa5.76□□□□□ -1.49
CLDND1-228ENST00000513873 ASMTLO95671 621 aa5.76□□□□□ -1.49
CLDND1-228ENST00000513873 CYP2C8P10632 490 aa5.76□□□□□ -1.49
CLDND1-228ENST00000513873 COL6A2P12110 1019 aa5.76□□□□□ -1.49
CLDND1-228ENST00000513873 PI3P19957 117 aa5.76□□□□□ -1.49
CLDND1-228ENST00000513873 FLT3P36888 993 aa5.76□□□□□ -1.49
CLDND1-228ENST00000513873 DNM2P50570 870 aa5.76□□□□□ -1.49
CLDND1-228ENST00000513873 FOXO4P98177 505 aa5.76□□□□□ -1.49
CLDND1-228ENST00000513873 CNGB1Q14028 1251 aaPredicted RBP5.76□□□□□ -1.49
CLDND1-228ENST00000513873 SAFB2Q14151 953 aaKnown RBP eCLIP5.76□□□□□ -1.49
CLDND1-228ENST00000513873 FNDC3BQ53EP0 1204 aaKnown RBP5.76□□□□□ -1.49
CLDND1-228ENST00000513873 C16orf59Q7L2K0 433 aa5.76□□□□□ -1.49
CLDND1-228ENST00000513873 TOE1Q96GM8 510 aaKnown RBP5.76□□□□□ -1.49
CLDND1-228ENST00000513873 PWWP2AQ96N64 755 aa5.76□□□□□ -1.49
CLDND1-228ENST00000513873 SYT17Q9BSW7 474 aa5.76□□□□□ -1.49
CLDND1-228ENST00000513873 NCOA5Q9HCD5 579 aaKnown RBP5.76□□□□□ -1.49
CLDND1-228ENST00000513873 TMEM260Q9NX78 707 aa5.76□□□□□ -1.49
CLDND1-228ENST00000513873 ANKRD36BQ8N2N9 1353 aa5.76□□□□□ -1.49
CLDND1-228ENST00000513873 ADGRB1O14514 1584 aa5.76□□□□□ -1.49
CLDND1-228ENST00000513873 CASZ1Q86V15 1759 aa5.75□□□□□ -1.49
CLDND1-228ENST00000513873 DLC1Q96QB1 1528 aa5.75□□□□□ -1.49
CLDND1-228ENST00000513873 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.75□□□□□ -1.49
CLDND1-228ENST00000513873 ESYT3A0FGR9 886 aa5.75□□□□□ -1.49
CLDND1-228ENST00000513873 B4E1Z4 1266 aa5.75□□□□□ -1.49
CLDND1-228ENST00000513873 IRS4O14654 1257 aaPredicted RBP5.75□□□□□ -1.49
CLDND1-228ENST00000513873 SLC27A2O14975 620 aa5.75□□□□□ -1.49
CLDND1-228ENST00000513873 CDC45O75419 566 aa5.75□□□□□ -1.49
CLDND1-228ENST00000513873 CLSTN1O94985 981 aa5.75□□□□□ -1.49
CLDND1-228ENST00000513873 SQSTM1Q13501 440 aa5.75□□□□□ -1.49
CLDND1-228ENST00000513873 TRIM61Q5EBN2 209 aa5.75□□□□□ -1.49
CLDND1-228ENST00000513873 TCERG1LQ5VWI1 586 aa5.75□□□□□ -1.49
CLDND1-228ENST00000513873 B3GNT8Q7Z7M8 397 aa5.75□□□□□ -1.49
CLDND1-228ENST00000513873 FAM126BQ8IXS8 530 aa5.75□□□□□ -1.49
CLDND1-228ENST00000513873 NLGN4XQ8N0W4 816 aa5.75□□□□□ -1.49
CLDND1-228ENST00000513873 PCDH19Q8TAB3 1148 aa5.75□□□□□ -1.49
CLDND1-228ENST00000513873 CXorf38Q8TB03 319 aa5.75□□□□□ -1.49
CLDND1-228ENST00000513873 RNPC3Q96LT9 517 aaKnown RBP5.75□□□□□ -1.49
CLDND1-228ENST00000513873 CDIP1Q9H305 208 aa5.75□□□□□ -1.49
CLDND1-228ENST00000513873 NUDCQ9Y266 331 aa5.75□□□□□ -1.49
CLDND1-228ENST00000513873 TMA7Q9Y2S6 64 aaKnown RBP5.75□□□□□ -1.49
CLDND1-228ENST00000513873 PMF1-BGLAPU3KQ54 211 aa5.75□□□□□ -1.49
CLDND1-228ENST00000513873 NRKQ7Z2Y5 1582 aa5.75□□□□□ -1.49
CLDND1-228ENST00000513873 NRXN3Q9Y4C0 1643 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 SHANK3Q9BYB0 1731 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 TCRBV5S2A0A599 114 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 CCDC66A2RUB6 948 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 ARVCFO00192 962 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 SUV39H1O43463 412 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 SMARCA5O60264 1052 aaPredicted RBP5.74□□□□□ -1.49
CLDND1-228ENST00000513873 NPTXRO95502 500 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 CELA3BP08861 270 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 ATF2P15336 505 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 KRT15P19012 456 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 LIMS1P48059 325 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 AFF3P51826 1226 aaKnown RBP5.74□□□□□ -1.49
CLDND1-228ENST00000513873 SSPNQ14714 243 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 GPR19Q15760 415 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 ZXDCQ2QGD7 858 aaPredicted RBP5.74□□□□□ -1.49
CLDND1-228ENST00000513873 C16orf86Q6ZW13 317 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 BRAPQ7Z569 592 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 DDX53Q86TM3 631 aaKnown RBP5.74□□□□□ -1.49
CLDND1-228ENST00000513873 MIB1Q86YT6 1006 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 GSTCDQ8NEC7 633 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 SMARCC2Q8TAQ2 1214 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 UHMK1Q8TAS1 419 aaKnown RBP5.74□□□□□ -1.49
CLDND1-228ENST00000513873 SLC7A14Q8TBB6 771 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 PNISRQ8TF01 805 aaKnown RBP5.74□□□□□ -1.49
CLDND1-228ENST00000513873 SLC12A5Q9H2X9 1139 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 FANCLQ9NW38 375 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 ASH2LQ9UBL3 628 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 MRPL42Q9Y6G3 142 aaKnown RBP5.74□□□□□ -1.49
CLDND1-228ENST00000513873 MYOM1P52179 1685 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 GOLGB1Q14789 3259 aaKnown RBP5.74□□□□□ -1.49
CLDND1-228ENST00000513873 TECPR2O15040 1411 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 ZBED9Q6R2W3 1325 aa5.74□□□□□ -1.49
CLDND1-228ENST00000513873 PPLO60437 1756 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms