RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 NCOA7Q8NI08 942 aa14.34□□□□□ -0.11
DDX41-215ENST00000512431 TMEM40Q8WWA1 233 aa14.34□□□□□ -0.11
DDX41-215ENST00000512431 CASD1Q96PB1 797 aa14.34□□□□□ -0.11
DDX41-215ENST00000512431 MAP3K14Q99558 947 aa14.34□□□□□ -0.11
DDX41-215ENST00000512431 OSBPL3Q9H4L5 887 aa14.34□□□□□ -0.11
DDX41-215ENST00000512431 SENP2Q9HC62 589 aa14.34□□□□□ -0.11
DDX41-215ENST00000512431 KCNH7Q9NS40 1196 aa14.34□□□□□ -0.11
DDX41-215ENST00000512431 PCDHA6Q9UN73 950 aa14.34□□□□□ -0.11
DDX41-215ENST00000512431 PCDHA8Q9Y5H6 950 aa14.34□□□□□ -0.11
DDX41-215ENST00000512431 NFASCO94856 1347 aa14.34□□□□□ -0.11
DDX41-215ENST00000512431 SPDYE4A6NLX3 237 aa14.33□□□□□ -0.12
DDX41-215ENST00000512431 EOMESO95936 686 aa14.33□□□□□ -0.12
DDX41-215ENST00000512431 RFX1P22670 979 aa14.33□□□□□ -0.12
DDX41-215ENST00000512431 PBX3P40426 434 aa14.33□□□□□ -0.12
DDX41-215ENST00000512431 ALDH7A1P49419 539 aaKnown RBP14.33□□□□□ -0.12
DDX41-215ENST00000512431 TDGQ13569 410 aa14.33□□□□□ -0.12
DDX41-215ENST00000512431 KIZQ2M2Z5 673 aa14.33□□□□□ -0.12
DDX41-215ENST00000512431 ZNF484Q5JVG2 852 aa14.33□□□□□ -0.12
DDX41-215ENST00000512431 CWF19L1Q69YN2 538 aaKnown RBP14.33□□□□□ -0.12
DDX41-215ENST00000512431 B4GALNT3Q6L9W6 998 aa14.33□□□□□ -0.12
DDX41-215ENST00000512431 LRRC55Q6ZSA7 311 aa14.33□□□□□ -0.12
DDX41-215ENST00000512431 C12orf76Q8N812 135 aaPredicted RBP14.33□□□□□ -0.12
DDX41-215ENST00000512431 DTWD2Q8NBA8 298 aa14.33□□□□□ -0.12
DDX41-215ENST00000512431 OSMRQ99650 979 aa14.33□□□□□ -0.12
DDX41-215ENST00000512431 MXRA8Q9BRK3 442 aa14.33□□□□□ -0.12
DDX41-215ENST00000512431 FNDC1Q4ZHG4 1894 aaPredicted RBP14.33□□□□□ -0.12
DDX41-215ENST00000512431 COL1A2P08123 1366 aa14.33□□□□□ -0.12
DDX41-215ENST00000512431 MED19A0JLT2 244 aaPredicted RBP14.32□□□□□ -0.12
DDX41-215ENST00000512431 PI15O43692 258 aa14.32□□□□□ -0.12
DDX41-215ENST00000512431 GIT2Q14161 759 aa14.32□□□□□ -0.12
DDX41-215ENST00000512431 UBE2SQ16763 222 aa14.32□□□□□ -0.12
DDX41-215ENST00000512431 OTOP3Q7RTS5 596 aa14.32□□□□□ -0.12
DDX41-215ENST00000512431 CABP7Q86V35 215 aa14.32□□□□□ -0.12
DDX41-215ENST00000512431 FAM228AQ86W67 206 aa14.32□□□□□ -0.12
DDX41-215ENST00000512431 CKAP2LQ8IYA6 745 aa14.32□□□□□ -0.12
DDX41-215ENST00000512431 KIAA2013Q8IYS2 634 aa14.32□□□□□ -0.12
DDX41-215ENST00000512431 SLC39A11Q8N1S5 342 aa14.32□□□□□ -0.12
DDX41-215ENST00000512431 RNF169Q8NCN4 708 aa14.32□□□□□ -0.12
DDX41-215ENST00000512431 RMDN1Q96DB5 314 aa14.32□□□□□ -0.12
DDX41-215ENST00000512431 TMEM169Q96HH4 297 aa14.32□□□□□ -0.12
DDX41-215ENST00000512431 PPP1R16BQ96T49 567 aa14.32□□□□□ -0.12
DDX41-215ENST00000512431 HINFPQ9BQA5 517 aa14.32□□□□□ -0.12
DDX41-215ENST00000512431 SPTBN4Q9H254 2564 aa14.32□□□□□ -0.12
DDX41-215ENST00000512431 VPS13AQ96RL7 3174 aa14.32□□□□□ -0.12
DDX41-215ENST00000512431 DCHS1Q96JQ0 3298 aa14.32□□□□□ -0.12
DDX41-215ENST00000512431 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.31□□□□□ -0.12
DDX41-215ENST00000512431 DDAH1O94760 285 aa14.31□□□□□ -0.12
DDX41-215ENST00000512431 ATG7O95352 703 aa14.31□□□□□ -0.12
DDX41-215ENST00000512431 DSC3Q14574 896 aa14.31□□□□□ -0.12
DDX41-215ENST00000512431 PUM1Q14671 1186 aaKnown RBP eCLIP14.31□□□□□ -0.126e-7■□□□□ 9.6
DDX41-215ENST00000512431 PDXDC2PQ6P474 469 aa14.31□□□□□ -0.12
DDX41-215ENST00000512431 CCDC149Q6ZUS6 474 aa14.31□□□□□ -0.12
DDX41-215ENST00000512431 PLEKHM2Q8IWE5 1019 aa14.31□□□□□ -0.12
DDX41-215ENST00000512431 ZNF654Q8IZM8 581 aa14.31□□□□□ -0.12
DDX41-215ENST00000512431 SIX5Q8N196 739 aa14.31□□□□□ -0.12
DDX41-215ENST00000512431 METTL13Q8N6R0 699 aa14.31□□□□□ -0.12
DDX41-215ENST00000512431 BAZ2BQ9UIF8 2168 aaKnown RBP14.31□□□□□ -0.12
DDX41-215ENST00000512431 CARNS1A5YM72 827 aa14.3□□□□□ -0.12
DDX41-215ENST00000512431 VTNP04004 478 aa14.3□□□□□ -0.12
DDX41-215ENST00000512431 CYP21A2P08686 494 aa14.3□□□□□ -0.12
DDX41-215ENST00000512431 NPR3P17342 541 aa14.3□□□□□ -0.12
DDX41-215ENST00000512431 METAP2P50579 478 aaKnown RBP eCLIP14.3□□□□□ -0.124e-6■■■■■ 28.4
DDX41-215ENST00000512431 DIEXFQ68CQ4 756 aaKnown RBP14.3□□□□□ -0.12
DDX41-215ENST00000512431 TMC5Q6UXY8 1006 aa14.3□□□□□ -0.12
DDX41-215ENST00000512431 NFXL1Q6ZNB6 911 aa14.3□□□□□ -0.12
DDX41-215ENST00000512431 PPFIBP1Q86W92 1011 aa14.3□□□□□ -0.12
DDX41-215ENST00000512431 CHD1LQ86WJ1 897 aa14.3□□□□□ -0.12
DDX41-215ENST00000512431 ECHDC2Q86YB7 292 aa14.3□□□□□ -0.12
DDX41-215ENST00000512431 VPS52Q8N1B4 723 aa14.3□□□□□ -0.12
DDX41-215ENST00000512431 MYL10Q9BUA6 226 aa14.3□□□□□ -0.12
DDX41-215ENST00000512431 MRPL9Q9BYD2 267 aaKnown RBP14.3□□□□□ -0.12
DDX41-215ENST00000512431 AGO4Q9HCK5 861 aaKnown RBP14.3□□□□□ -0.12
DDX41-215ENST00000512431 ZNF302Q9NR11 478 aa14.3□□□□□ -0.12
DDX41-215ENST00000512431 DUSP12Q9UNI6 340 aa14.3□□□□□ -0.12
DDX41-215ENST00000512431 LOXHD1Q8IVV2 1947 aa14.3□□□□□ -0.12
DDX41-215ENST00000512431 IGKV6D-21A0A0A0MT36 114 aa14.29□□□□□ -0.12
DDX41-215ENST00000512431 NT5C1B-RDH14C9J2C7 533 aa14.29□□□□□ -0.12
DDX41-215ENST00000512431 E7EWF7 191 aa14.29□□□□□ -0.12
DDX41-215ENST00000512431 DDX39AO00148 427 aaKnown RBP14.29□□□□□ -0.12
DDX41-215ENST00000512431 ARP10275 920 aa14.29□□□□□ -0.12
DDX41-215ENST00000512431 TMOD1P28289 359 aa14.29□□□□□ -0.12
DDX41-215ENST00000512431 ZNF76P36508 570 aa14.29□□□□□ -0.12
DDX41-215ENST00000512431 BCAR1P56945 870 aa14.29□□□□□ -0.12
DDX41-215ENST00000512431 NONOQ15233 471 aaKnown RBP eCLIP14.29□□□□□ -0.12
DDX41-215ENST00000512431 CEP55Q53EZ4 464 aa14.29□□□□□ -0.12
DDX41-215ENST00000512431 KANK3Q6NY19 840 aa14.29□□□□□ -0.12
DDX41-215ENST00000512431 MIS18BP1Q6P0N0 1132 aa14.29□□□□□ -0.12
DDX41-215ENST00000512431 ZC3H14Q6PJT7 736 aaKnown RBP14.29□□□□□ -0.12
DDX41-215ENST00000512431 ZNF710Q8N1W2 664 aa14.29□□□□□ -0.12
DDX41-215ENST00000512431 TMTC2Q8N394 836 aa14.29□□□□□ -0.12
DDX41-215ENST00000512431 SRBD1Q8N5C6 995 aaKnown RBP14.29□□□□□ -0.12
DDX41-215ENST00000512431 CYP2W1Q8TAV3 490 aa14.29□□□□□ -0.12
DDX41-215ENST00000512431 IGDCC4Q8TDY8 1250 aa14.29□□□□□ -0.12
DDX41-215ENST00000512431 RUFY2Q8WXA3 655 aa14.29□□□□□ -0.12
DDX41-215ENST00000512431 RWDD1Q9H446 243 aaPredicted RBP14.29□□□□□ -0.12
DDX41-215ENST00000512431 SFXN1Q9H9B4 322 aa14.29□□□□□ -0.12
DDX41-215ENST00000512431 KCNK12Q9HB15 430 aa14.29□□□□□ -0.12
DDX41-215ENST00000512431 RNF19AQ9NV58 838 aa14.29□□□□□ -0.12
DDX41-215ENST00000512431 IGSF9Q9P2J2 1179 aa14.29□□□□□ -0.12
DDX41-215ENST00000512431 CEP131Q9UPN4 1083 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms