RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 PPP1R16BQ96T49 567 aa13.04□□□□□ -0.32
SH3RF1-205ENST00000511421 OSMRQ99650 979 aa13.04□□□□□ -0.32
SH3RF1-205ENST00000511421 SH2D3AQ9BRG2 576 aa13.04□□□□□ -0.32
SH3RF1-205ENST00000511421 FTHL17Q9BXU8 183 aa13.04□□□□□ -0.32
SH3RF1-205ENST00000511421 TSPYL2Q9H2G4 693 aaPredicted RBP13.04□□□□□ -0.32
SH3RF1-205ENST00000511421 TMEM60Q9H2L4 133 aa13.04□□□□□ -0.32
SH3RF1-205ENST00000511421 ADAMTS10Q9H324 1103 aa13.04□□□□□ -0.32
SH3RF1-205ENST00000511421 SUGCTQ9HAC7 445 aa13.04□□□□□ -0.32
SH3RF1-205ENST00000511421 ERVK-5Q9HDB9 667 aa13.04□□□□□ -0.32
SH3RF1-205ENST00000511421 RGL1Q9NZL6 768 aa13.04□□□□□ -0.32
SH3RF1-205ENST00000511421 TTC3P53804 2025 aa13.04□□□□□ -0.32
SH3RF1-205ENST00000511421 RPS6KA5O75582 802 aa13.03□□□□□ -0.32
SH3RF1-205ENST00000511421 POU3F3P20264 500 aaPredicted RBP13.03□□□□□ -0.32
SH3RF1-205ENST00000511421 TMOD1P28289 359 aa13.03□□□□□ -0.32
SH3RF1-205ENST00000511421 NLRP11P59045 1033 aaKnown RBP13.03□□□□□ -0.32
SH3RF1-205ENST00000511421 DRP2Q13474 957 aa13.03□□□□□ -0.32
SH3RF1-205ENST00000511421 NCAPH2Q6IBW4 605 aa13.03□□□□□ -0.32
SH3RF1-205ENST00000511421 C4orf19Q8IY42 314 aa13.03□□□□□ -0.32
SH3RF1-205ENST00000511421 SLC17A8Q8NDX2 589 aa13.03□□□□□ -0.32
SH3RF1-205ENST00000511421 MAP7D2Q96T17 732 aa13.03□□□□□ -0.32
SH3RF1-205ENST00000511421 LXNQ9BS40 222 aa13.03□□□□□ -0.32
SH3RF1-205ENST00000511421 BACH2Q9BYV9 841 aa13.03□□□□□ -0.32
SH3RF1-205ENST00000511421 RC3H2Q9HBD1 1191 aaKnown RBP13.03□□□□□ -0.32
SH3RF1-205ENST00000511421 PCDHA12Q9UN75 941 aa13.03□□□□□ -0.32
SH3RF1-205ENST00000511421 ST3GAL5Q9UNP4 418 aa13.03□□□□□ -0.32
SH3RF1-205ENST00000511421 AKT3Q9Y243 479 aa13.03□□□□□ -0.32
SH3RF1-205ENST00000511421 PRUNE2Q8WUY3 3088 aa13.03□□□□□ -0.32
SH3RF1-205ENST00000511421 MGEA5O60502 916 aa13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 LPXNO60711 386 aa13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 DKC1O60832 514 aaKnown RBP eCLIP13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 MAFO75444 373 aaPredicted RBP13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 SLITRK3O94933 977 aa13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 ATP2B1P20020 1258 aa13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 IGFBP4P22692 258 aa13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 U2AF2P26368 475 aaKnown RBP eCLIP13.02□□□□□ -0.329e-8■■■■■ 32.2
SH3RF1-205ENST00000511421 MCM7P33993 719 aa13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 MCM2P49736 904 aa13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 GPC3P51654 580 aa13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 NPEPPSP55786 919 aa13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 NFX1Q12986 1120 aaKnown RBP13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 PLA2G4FQ68DD2 849 aa13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 FAM43BQ6ZT52 329 aaPredicted RBP13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 FAM228AQ86W67 206 aa13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 NOSTRINQ8IVI9 506 aa13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 ZNF710Q8N1W2 664 aa13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 ZNF579Q8NAF0 562 aaKnown RBP13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 DYDC2Q96IM9 177 aa13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 TGS1Q96RS0 853 aaKnown RBP13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 YME1L1Q96TA2 773 aa13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 HSD17B14Q9BPX1 270 aa13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 TTC12Q9H892 705 aaPredicted RBP13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 CYP26B1Q9NR63 512 aa13.02□□□□□ -0.32
SH3RF1-205ENST00000511421 LOXHD1Q8IVV2 1947 aa13.02□□□□□ -0.33
SH3RF1-205ENST00000511421 GPR182O15218 404 aa13.02□□□□□ -0.33
SH3RF1-205ENST00000511421 TXKP42681 527 aa13.02□□□□□ -0.33
SH3RF1-205ENST00000511421 GRB10Q13322 594 aa13.02□□□□□ -0.33
SH3RF1-205ENST00000511421 CTTNQ14247 550 aaKnown RBP13.02□□□□□ -0.33
SH3RF1-205ENST00000511421 ZNF174Q15697 407 aa13.02□□□□□ -0.33
SH3RF1-205ENST00000511421 ZNF689Q96CS4 500 aaPredicted RBP13.02□□□□□ -0.33
SH3RF1-205ENST00000511421 ZNF668Q96K58 619 aaPredicted RBP13.02□□□□□ -0.33
SH3RF1-205ENST00000511421 EIF2AK1Q9BQI3 630 aaKnown RBP13.02□□□□□ -0.33
SH3RF1-205ENST00000511421 C17orf80Q9BSJ5 609 aa13.02□□□□□ -0.33
SH3RF1-205ENST00000511421 ZSWIM4Q9H7M6 989 aa13.02□□□□□ -0.33
SH3RF1-205ENST00000511421 MTCH2Q9Y6C9 303 aa13.02□□□□□ -0.33
SH3RF1-205ENST00000511421 PRRC2BQ5JSZ5 2229 aaKnown RBP13.02□□□□□ -0.33
SH3RF1-205ENST00000511421 ZBTB39O15060 712 aa13.01□□□□□ -0.33
SH3RF1-205ENST00000511421 TRAPPC10P48553 1259 aa13.01□□□□□ -0.33
SH3RF1-205ENST00000511421 CYP4A11Q02928 519 aa13.01□□□□□ -0.33
SH3RF1-205ENST00000511421 ORC2Q13416 577 aaPredicted RBP13.01□□□□□ -0.33
SH3RF1-205ENST00000511421 ODR4Q5SWX8 454 aa13.01□□□□□ -0.33
SH3RF1-205ENST00000511421 MTUS1Q9ULD2 1270 aa13.01□□□□□ -0.33
SH3RF1-205ENST00000511421 PPME1Q9Y570 386 aa13.01□□□□□ -0.33
SH3RF1-205ENST00000511421 COL4A6Q14031 1691 aa13.01□□□□□ -0.33
SH3RF1-205ENST00000511421 DGKIO75912 1065 aa13□□□□□ -0.33
SH3RF1-205ENST00000511421 LYPLA2O95372 231 aa13□□□□□ -0.33
SH3RF1-205ENST00000511421 LINC00271P0C7V0 271 aa13□□□□□ -0.33
SH3RF1-205ENST00000511421 EIF4BP23588 611 aaKnown RBP13□□□□□ -0.33
SH3RF1-205ENST00000511421 YWHABP31946 246 aaKnown RBP13□□□□□ -0.33
SH3RF1-205ENST00000511421 TOB1P50616 345 aaPredicted RBP13□□□□□ -0.33
SH3RF1-205ENST00000511421 DSC3Q14574 896 aa13□□□□□ -0.33
SH3RF1-205ENST00000511421 TTC38Q5R3I4 469 aa13□□□□□ -0.33
SH3RF1-205ENST00000511421 NPAS4Q8IUM7 802 aa13□□□□□ -0.33
SH3RF1-205ENST00000511421 TPH2Q8IWU9 490 aa13□□□□□ -0.33
SH3RF1-205ENST00000511421 C4orf32Q8N8J7 132 aa13□□□□□ -0.33
SH3RF1-205ENST00000511421 CEP170P1Q96L14 293 aa13□□□□□ -0.33
SH3RF1-205ENST00000511421 ADAM2Q99965 735 aa13□□□□□ -0.33
SH3RF1-205ENST00000511421 DHX33Q9H6R0 707 aaKnown RBP13□□□□□ -0.33
SH3RF1-205ENST00000511421 RGS18Q9NS28 235 aa13□□□□□ -0.33
SH3RF1-205ENST00000511421 SUCLA2Q9P2R7 463 aaPredicted RBP13□□□□□ -0.33
SH3RF1-205ENST00000511421 A0A0C4DFX4 3053 aa13□□□□□ -0.33
SH3RF1-205ENST00000511421 TRANK1O15050 2925 aa13□□□□□ -0.33
SH3RF1-205ENST00000511421 POTEMA6NI47 508 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 C9IYK1 514 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 DARSP14868 501 aaKnown RBP12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 GJB2P29033 226 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 SARSP49591 514 aaKnown RBP12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 DNM2P50570 870 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 CDC42EP1Q00587 391 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 GNL2Q13823 731 aaKnown RBP12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 NBR1Q14596 966 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms