RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 A0A087X0B3 334 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 KIAA0355O15063 1070 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 VTNP04004 478 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 SSBP05455 408 aaKnown RBP eCLIP11.6□□□□□ -0.55
NR1I3-227ENST00000510951 CKBP12277 381 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 MUTP22033 750 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 DRP2Q13474 957 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 BFSP2Q13515 415 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 EMC2Q15006 297 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 EFCAB12Q6NXP0 572 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 TAF2Q6P1X5 1199 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 SHC4Q6S5L8 630 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 MAEAQ7L5Y9 396 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 PDILTQ8N807 584 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 RETREG2Q8NC44 543 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 CAGE1Q8TC20 777 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 LRRC15Q8TF66 581 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 SLC7A3Q8WY07 619 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 SCLYQ96I15 445 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 ZNF668Q96K58 619 aaPredicted RBP11.6□□□□□ -0.55
NR1I3-227ENST00000510951 CEP89Q96ST8 783 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 CCSER1Q9C0I3 900 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 NT5C3AQ9H0P0 336 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 WNT8AQ9H1J5 351 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 BHMT2Q9H2M3 363 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 AKT3Q9Y243 479 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 MICAL3Q7RTP6 2002 aa11.6□□□□□ -0.55
NR1I3-227ENST00000510951 SMIM35A0A1B0GVV1 85 aa11.59□□□□□ -0.55
NR1I3-227ENST00000510951 H0YGN5 161 aa11.59□□□□□ -0.55
NR1I3-227ENST00000510951 MAGEB2O15479 319 aa11.59□□□□□ -0.55
NR1I3-227ENST00000510951 TIMP1P01033 207 aa11.59□□□□□ -0.55
NR1I3-227ENST00000510951 RFC5P40937 340 aa11.59□□□□□ -0.55
NR1I3-227ENST00000510951 MDM2Q00987 491 aaPredicted RBP11.59□□□□□ -0.55
NR1I3-227ENST00000510951 DHX8Q14562 1220 aaKnown RBP11.59□□□□□ -0.55
NR1I3-227ENST00000510951 HYIQ5T013 277 aa11.59□□□□□ -0.55
NR1I3-227ENST00000510951 ZNF618Q5T7W0 954 aa11.59□□□□□ -0.55
NR1I3-227ENST00000510951 LRRC8DQ7L1W4 858 aa11.59□□□□□ -0.55
NR1I3-227ENST00000510951 RSPH3Q86UC2 560 aa11.59□□□□□ -0.55
NR1I3-227ENST00000510951 BADQ92934 168 aa11.59□□□□□ -0.55
NR1I3-227ENST00000510951 TMEM143Q96AN5 459 aa11.59□□□□□ -0.55
NR1I3-227ENST00000510951 SCLT1Q96NL6 688 aa11.59□□□□□ -0.55
NR1I3-227ENST00000510951 MAP7D2Q96T17 732 aa11.59□□□□□ -0.55
NR1I3-227ENST00000510951 MTRQ99707 1265 aa11.59□□□□□ -0.55
NR1I3-227ENST00000510951 PANK2Q9BZ23 570 aa11.59□□□□□ -0.55
NR1I3-227ENST00000510951 ATP6V0A4Q9HBG4 840 aa11.59□□□□□ -0.55
NR1I3-227ENST00000510951 CCDC39Q9UFE4 941 aa11.59□□□□□ -0.55
NR1I3-227ENST00000510951 DBR1Q9UK59 544 aaKnown RBP11.59□□□□□ -0.55
NR1I3-227ENST00000510951 DNM3Q9UQ16 869 aa11.59□□□□□ -0.55
NR1I3-227ENST00000510951 GINS2Q9Y248 185 aa11.59□□□□□ -0.55
NR1I3-227ENST00000510951 PITPNM1O00562 1244 aa11.58□□□□□ -0.56
NR1I3-227ENST00000510951 SLC26A4O43511 780 aa11.58□□□□□ -0.56
NR1I3-227ENST00000510951 MAFO75444 373 aaPredicted RBP11.58□□□□□ -0.56
NR1I3-227ENST00000510951 EYA4O95677 639 aa11.58□□□□□ -0.56
NR1I3-227ENST00000510951 PLA2G4BP0C869 781 aa11.58□□□□□ -0.56
NR1I3-227ENST00000510951 SELPP16109 830 aa11.58□□□□□ -0.56
NR1I3-227ENST00000510951 TMOD1P28289 359 aa11.58□□□□□ -0.56
NR1I3-227ENST00000510951 STAT6P42226 847 aa11.58□□□□□ -0.56
NR1I3-227ENST00000510951 MRPS6P82932 125 aaKnown RBP11.58□□□□□ -0.56
NR1I3-227ENST00000510951 RBL2Q08999 1139 aa11.58□□□□□ -0.56
NR1I3-227ENST00000510951 MKRN4PQ13434 485 aaPredicted RBP11.58□□□□□ -0.56
NR1I3-227ENST00000510951 MCM6Q14566 821 aa11.58□□□□□ -0.56
NR1I3-227ENST00000510951 RRAGBQ5VZM2 374 aa11.58□□□□□ -0.56
NR1I3-227ENST00000510951 RESP18Q5W5W9 173 aa11.58□□□□□ -0.56
NR1I3-227ENST00000510951 PADI6Q6TGC4 694 aa11.58□□□□□ -0.56
NR1I3-227ENST00000510951 KIAA0319LQ8IZA0 1049 aa11.58□□□□□ -0.56
NR1I3-227ENST00000510951 LINC01465Q8N7H1 131 aa11.58□□□□□ -0.56
NR1I3-227ENST00000510951 RAD54LQ92698 747 aa11.58□□□□□ -0.56
NR1I3-227ENST00000510951 DHX58Q96C10 678 aa11.58□□□□□ -0.56
NR1I3-227ENST00000510951 RUSC1Q9BVN2 902 aa11.58□□□□□ -0.56
NR1I3-227ENST00000510951 DHX33Q9H6R0 707 aaKnown RBP11.58□□□□□ -0.56
NR1I3-227ENST00000510951 GPRC5CQ9NQ84 441 aa11.58□□□□□ -0.56
NR1I3-227ENST00000510951 XPNPEP1Q9NQW7 623 aa11.58□□□□□ -0.56
NR1I3-227ENST00000510951 BLOC1S4Q9NUP1 217 aa11.58□□□□□ -0.56
NR1I3-227ENST00000510951 CDY2AQ9Y6F7 541 aa11.58□□□□□ -0.56
NR1I3-227ENST00000510951 PTPRSQ13332 1948 aa11.57□□□□□ -0.56
NR1I3-227ENST00000510951 IGKV6-21A0A0C4DH24 114 aa11.57□□□□□ -0.56
NR1I3-227ENST00000510951 A0A1B0GVL5 298 aa11.57□□□□□ -0.56
NR1I3-227ENST00000510951 RSPH10B2B2RC85 870 aa11.57□□□□□ -0.56
NR1I3-227ENST00000510951 M0QZ92 97 aa11.57□□□□□ -0.56
NR1I3-227ENST00000510951 DGAT1O75907 488 aa11.57□□□□□ -0.56
NR1I3-227ENST00000510951 CHRNA1P02708 482 aa11.57□□□□□ -0.56
NR1I3-227ENST00000510951 IQCF3P0C7M6 154 aa11.57□□□□□ -0.56
NR1I3-227ENST00000510951 RSPH10BP0C881 870 aa11.57□□□□□ -0.56
NR1I3-227ENST00000510951 XRCC6P12956 609 aaKnown RBP eCLIP11.57□□□□□ -0.56
NR1I3-227ENST00000510951 CSF2RAP15509 400 aa11.57□□□□□ -0.56
NR1I3-227ENST00000510951 MAGEA10P43363 369 aaPredicted RBP11.57□□□□□ -0.56
NR1I3-227ENST00000510951 SLC12A3P55017 1021 aa11.57□□□□□ -0.56
NR1I3-227ENST00000510951 CACNB1Q02641 598 aaPredicted RBP11.57□□□□□ -0.56
NR1I3-227ENST00000510951 MGAT3Q09327 533 aa11.57□□□□□ -0.56
NR1I3-227ENST00000510951 RAD51AP2Q09MP3 1159 aa11.57□□□□□ -0.56
NR1I3-227ENST00000510951 KIZQ2M2Z5 673 aa11.57□□□□□ -0.56
NR1I3-227ENST00000510951 FAM102BQ5T8I3 360 aa11.57□□□□□ -0.56
NR1I3-227ENST00000510951 TRAF7Q6Q0C0 670 aa11.57□□□□□ -0.56
NR1I3-227ENST00000510951 DEFB128Q7Z7B8 93 aa11.57□□□□□ -0.56
NR1I3-227ENST00000510951 GPBP1Q86WP2 473 aa11.57□□□□□ -0.56
NR1I3-227ENST00000510951 RHPN2Q8IUC4 686 aa11.57□□□□□ -0.56
NR1I3-227ENST00000510951 FSIP1Q8NA03 581 aa11.57□□□□□ -0.56
NR1I3-227ENST00000510951 LARP4BQ92615 738 aaKnown RBP11.57□□□□□ -0.56
NR1I3-227ENST00000510951 NLRP4Q96MN2 994 aa11.57□□□□□ -0.56
NR1I3-227ENST00000510951 LBHD1Q9BQE6 289 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms