RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 WHAMMP3Q1A5X7 153 aa7.73□□□□□ -1.17
KDM3B-207ENST00000510866 RUFY4Q6ZNE9 571 aa7.73□□□□□ -1.17
KDM3B-207ENST00000510866 NOP9Q86U38 636 aaKnown RBP7.73□□□□□ -1.17
KDM3B-207ENST00000510866 ERICH1Q86X53 443 aa7.73□□□□□ -1.17
KDM3B-207ENST00000510866 ZNF609O15014 1411 aa7.73□□□□□ -1.17
KDM3B-207ENST00000510866 PPLO60437 1756 aa7.73□□□□□ -1.17
KDM3B-207ENST00000510866 EIF3CLB5ME19 914 aaKnown RBP7.73□□□□□ -1.17
KDM3B-207ENST00000510866 HEXIM1O94992 359 aaKnown RBP7.73□□□□□ -1.17
KDM3B-207ENST00000510866 ACTN1P12814 892 aa7.73□□□□□ -1.17
KDM3B-207ENST00000510866 PPP2R5EQ16537 467 aa7.73□□□□□ -1.17
KDM3B-207ENST00000510866 MUM1L1Q5H9M0 696 aa7.73□□□□□ -1.17
KDM3B-207ENST00000510866 RWDD4Q6NW29 188 aaKnown RBP7.73□□□□□ -1.17
KDM3B-207ENST00000510866 XXYLT1Q8NBI6 393 aa7.73□□□□□ -1.17
KDM3B-207ENST00000510866 MRFAP1L1Q96HT8 127 aa7.73□□□□□ -1.17
KDM3B-207ENST00000510866 EIF3CQ99613 913 aaKnown RBP7.73□□□□□ -1.17
KDM3B-207ENST00000510866 SPZ1Q9BXG8 430 aa7.73□□□□□ -1.17
KDM3B-207ENST00000510866 DDX41Q9UJV9 622 aaKnown RBP7.73□□□□□ -1.17
KDM3B-207ENST00000510866 PIN4Q9Y237 131 aaKnown RBP7.73□□□□□ -1.17
KDM3B-207ENST00000510866 IQGAP1P46940 1657 aa7.73□□□□□ -1.17
KDM3B-207ENST00000510866 TNS2Q63HR2 1409 aa7.73□□□□□ -1.17
KDM3B-207ENST00000510866 TFRCP02786 760 aaKnown RBP7.73□□□□□ -1.17
KDM3B-207ENST00000510866 GBP1P32455 592 aa7.73□□□□□ -1.17
KDM3B-207ENST00000510866 CEP55Q53EZ4 464 aa7.73□□□□□ -1.17
KDM3B-207ENST00000510866 TCP11X2Q5H9J9 407 aa7.73□□□□□ -1.17
KDM3B-207ENST00000510866 FBXO41Q8TF61 875 aa7.73□□□□□ -1.17
KDM3B-207ENST00000510866 CALN1Q9BXU9 219 aa7.73□□□□□ -1.17
KDM3B-207ENST00000510866 NDST4Q9H3R1 872 aa7.73□□□□□ -1.17
KDM3B-207ENST00000510866 SUCLA2Q9P2R7 463 aaPredicted RBP7.73□□□□□ -1.17
KDM3B-207ENST00000510866 POLR1AO95602 1720 aaPredicted RBP7.73□□□□□ -1.17
KDM3B-207ENST00000510866 GPR75-ASB3A0A0A6YYF3 556 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 ESYT2A0FGR8 921 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 MCF2LO15068 1137 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 RASA1P20936 1047 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 EPHA7Q15375 998 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 SGMS1Q86VZ5 419 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 LRRC8AQ8IWT6 810 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 NCAPGQ9BPX3 1015 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 TYW1Q9NV66 732 aaKnown RBP7.72□□□□□ -1.17
KDM3B-207ENST00000510866 LMCD1Q9NZU5 365 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 IGSF3O75054 1194 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 HIP1RO75146 1068 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 SERPING1P05155 500 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 SNX1Q13596 522 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 TEX2Q8IWB9 1127 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 AFAP1L1Q8TED9 768 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 PARD3BQ8TEW8 1205 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 AFG1LQ8WV93 481 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 HSPH1Q92598 858 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 CACYBPQ9HB71 228 aaKnown RBP7.72□□□□□ -1.17
KDM3B-207ENST00000510866 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.72□□□□□ -1.17
KDM3B-207ENST00000510866 SRGNP10124 158 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 GCLMP48507 274 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 DARS2Q6PI48 645 aaKnown RBP7.72□□□□□ -1.17
KDM3B-207ENST00000510866 MTIF3Q9H2K0 278 aaKnown RBP7.72□□□□□ -1.17
KDM3B-207ENST00000510866 SMARCAD1Q9H4L7 1026 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 PASKQ96RG2 1323 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 COL5A2P05997 1499 aaPredicted RBP7.72□□□□□ -1.17
KDM3B-207ENST00000510866 PP2D1A8MPX8 630 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 S100BP04271 92 aaPredicted RBP7.72□□□□□ -1.17
KDM3B-207ENST00000510866 CPB1P15086 417 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 TCP1P17987 556 aaKnown RBP7.72□□□□□ -1.17
KDM3B-207ENST00000510866 CASP1P29466 404 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 GUCY1A2P33402 732 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 GARSP41250 739 aaKnown RBP7.72□□□□□ -1.17
KDM3B-207ENST00000510866 ELF2Q15723 593 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 ZNF579Q8NAF0 562 aaKnown RBP7.72□□□□□ -1.17
KDM3B-207ENST00000510866 RNF149Q8NC42 400 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 BBOF1Q8ND07 529 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 MGARPQ8TDB4 240 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 TSC1Q92574 1164 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 KIF12Q96FN5 646 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 RSRC1Q96IZ7 334 aaKnown RBP7.72□□□□□ -1.17
KDM3B-207ENST00000510866 RPGRIP1Q96KN7 1286 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 PRMT6Q96LA8 375 aaPredicted RBP7.72□□□□□ -1.17
KDM3B-207ENST00000510866 TRIM56Q9BRZ2 755 aaKnown RBP7.72□□□□□ -1.17
KDM3B-207ENST00000510866 ZWILCHQ9H900 591 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 UBN1Q9NPG3 1134 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.72□□□□□ -1.17
KDM3B-207ENST00000510866 CIB2O75838 187 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 EPHB1P54762 984 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 YWHAGP61981 247 aaKnown RBP eCLIP7.72□□□□□ -1.17
KDM3B-207ENST00000510866 LMNB2Q03252 620 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 RNF219Q5W0B1 726 aaPredicted RBP7.72□□□□□ -1.17
KDM3B-207ENST00000510866 ARHGEF18Q6ZSZ5 1173 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 CCDC13Q8IYE1 715 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 CHST13Q8NET6 341 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 ENOX1Q8TC92 643 aaKnown RBP7.72□□□□□ -1.17
KDM3B-207ENST00000510866 SAAL1Q96ER3 474 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 RUNDC3BQ96NL0 473 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 FAM114A2Q9NRY5 505 aa7.72□□□□□ -1.17
KDM3B-207ENST00000510866 UPP2O95045 317 aa7.71□□□□□ -1.17
KDM3B-207ENST00000510866 HDLBPQ00341 1268 aaKnown RBP7.71□□□□□ -1.17
KDM3B-207ENST00000510866 STOX1Q6ZVD7 989 aa7.71□□□□□ -1.17
KDM3B-207ENST00000510866 GBA2Q9HCG7 927 aaPredicted RBP7.71□□□□□ -1.17
KDM3B-207ENST00000510866 TUFT1Q9NNX1 390 aa7.71□□□□□ -1.17
KDM3B-207ENST00000510866 FNDC3AQ9Y2H6 1198 aaKnown RBP7.71□□□□□ -1.17
KDM3B-207ENST00000510866 BUB1BO60566 1050 aaPredicted RBP7.71□□□□□ -1.17
KDM3B-207ENST00000510866 CHGBP05060 677 aa7.71□□□□□ -1.17
KDM3B-207ENST00000510866 PDHBP11177 359 aa7.71□□□□□ -1.17
KDM3B-207ENST00000510866 PSMA2P25787 234 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms