RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 BCAS3Q9H6U6 928 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 ZSWIM4Q9H7M6 989 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 MMRN2Q9H8L6 949 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 METTL14Q9HCE5 456 aaKnown RBP5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 PLCB1Q9NQ66 1216 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 PXMP2Q9NR77 195 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 PICK1Q9NRD5 415 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 HOMER2Q9NSB8 354 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 RNF146Q9NTX7 359 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 TBC1D22BQ9NU19 505 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 ARHGAP20Q9P2F6 1191 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 ARMCX3Q9UH62 379 aaPredicted RBP5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 CDC23Q9UJX2 597 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 DBR1Q9UK59 544 aaKnown RBP5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 ADAMTS5Q9UNA0 930 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 LOC285556D6RIA3 1793 aa5.24□□□□□ -1.57
PDLIM5-214ENST00000510099 ATP8B3O60423 1300 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 PARP14Q460N5 1801 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 SMCHD1A6NHR9 2005 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 ANO9A1A5B4 782 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 GTPBP10A4D1E9 387 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 RCCD1A6NED2 376 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 SOWAHBA6NEL2 793 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 SPDYE16A6NNV3 312 aaPredicted RBP5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 WDR64B1ANS9 1081 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 C19orf81C9J6K1 198 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 DDX39AO00148 427 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 ZBTB39O15060 712 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 PJA2O43164 708 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 KRT86O43790 486 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 TLR2O60603 784 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 GFRA3O60609 400 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 CCNE2O96020 404 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 ABL1P00519 1130 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 AFPP02771 609 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 SERPING1P05155 500 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 P4HBP07237 508 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 PLEKP08567 350 aaPredicted RBP5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 MAPTP10636 758 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 XRCC5P13010 732 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 ERCC3P19447 782 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 LMNB1P20700 586 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 RPL13P26373 211 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 ANXA13P27216 316 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 CCND2P30279 289 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 NMT1P30419 496 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 SFNP31947 248 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 EIF4A3P38919 411 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 RARRES1P49788 294 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 HIRAP54198 1017 aaPredicted RBP5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 HMGCS2P54868 508 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 CHMP4BP1P59074 171 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 KRT76Q01546 638 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 KCNA1Q09470 495 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 KCNH2Q12809 1159 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 ALCAMQ13740 583 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 LAPTM4AQ15012 233 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 SPA17Q15506 151 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 SH3D19Q5HYK7 790 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 CCDC122Q5T0U0 273 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 SFMBT2Q5VUG0 894 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 SNRNP48Q6IEG0 339 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 TRAF7Q6Q0C0 670 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 PADI6Q6TGC4 694 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 NSMFQ6X4W1 530 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 RNF207Q6ZRF8 634 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 STXBP4Q6ZWJ1 553 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 RRAGAQ7L523 313 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 ZNF720Q7Z2F6 126 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 SRGAP1Q7Z6B7 1085 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 KIAA1328Q86T90 577 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 FAM178BQ8IXR5 827 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 CPXCR1Q8N123 301 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 MYCT1Q8N699 235 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 CEP112Q8N8E3 955 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 RDM1Q8NG50 284 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 GOLGA5Q8TBA6 731 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 TMEM174Q8WUU8 243 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 UBXN4Q92575 508 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 RABGGTAQ92696 567 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 GOLGA1Q92805 767 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 ZKSCAN4Q969J2 545 aaPredicted RBP5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 SLC35C1Q96A29 364 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 BORCS6Q96GS4 357 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 CCDC42Q96M95 316 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 INPP4AQ96PE3 977 aaPredicted RBP5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 TAAR1Q96RJ0 339 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 RMDN3Q96TC7 470 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 SENP7Q9BQF6 1050 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 TIPINQ9BVW5 301 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 TEX13BQ9BXU2 312 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 IFIH1Q9BYX4 1025 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 LACRTQ9GZZ8 138 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 ST6GALNAC4Q9H4F1 302 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 AGPAT3Q9NRZ7 376 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 DMAC2Q9NW81 257 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 WBP1LQ9NX94 342 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 PKD2L1Q9P0L9 805 aa5.23□□□□□ -1.57
PDLIM5-214ENST00000510099 TRIM10Q9UDY6 481 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms