RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 ECM1Q16610 540 aa15.22■□□□□ 0.03
SNF8-206ENST00000509989 ZNF697Q5TEC3 545 aa15.22■□□□□ 0.03
SNF8-206ENST00000509989 GPR153Q6NV75 609 aa15.22■□□□□ 0.03
SNF8-206ENST00000509989 KSR1Q8IVT5 923 aa15.22■□□□□ 0.03
SNF8-206ENST00000509989 TPH2Q8IWU9 490 aa15.22■□□□□ 0.03
SNF8-206ENST00000509989 SLFN12Q8IYM2 578 aa15.22■□□□□ 0.03
SNF8-206ENST00000509989 MYLIPQ8WY64 445 aa15.22■□□□□ 0.03
SNF8-206ENST00000509989 SEPT8Q92599 483 aa15.22■□□□□ 0.03
SNF8-206ENST00000509989 CDX2Q99626 313 aaPredicted RBP15.22■□□□□ 0.03
SNF8-206ENST00000509989 HSD17B14Q9BPX1 270 aa15.22■□□□□ 0.03
SNF8-206ENST00000509989 ADAMTS10Q9H324 1103 aa15.22■□□□□ 0.03
SNF8-206ENST00000509989 ZNF576Q9H609 170 aa15.22■□□□□ 0.03
SNF8-206ENST00000509989 PADI3Q9ULW8 664 aa15.22■□□□□ 0.03
SNF8-206ENST00000509989 COL6A3P12111 3177 aa15.22■□□□□ 0.03
SNF8-206ENST00000509989 ATG2AQ2TAZ0 1938 aa15.21■□□□□ 0.03
SNF8-206ENST00000509989 FNDC1Q4ZHG4 1894 aaPredicted RBP15.21■□□□□ 0.03
SNF8-206ENST00000509989 IGKV6-21A0A0C4DH24 114 aa15.21■□□□□ 0.03
SNF8-206ENST00000509989 PP2D1A8MPX8 630 aa15.21■□□□□ 0.03
SNF8-206ENST00000509989 K7ELQ4 463 aaPredicted RBP15.21■□□□□ 0.03
SNF8-206ENST00000509989 UPP2O95045 317 aa15.21■□□□□ 0.03
SNF8-206ENST00000509989 NLRP11P59045 1033 aaKnown RBP15.21■□□□□ 0.03
SNF8-206ENST00000509989 PTGDRQ13258 359 aa15.21■□□□□ 0.03
SNF8-206ENST00000509989 IER5Q5VY09 327 aa15.21■□□□□ 0.03
SNF8-206ENST00000509989 FAM173BQ6P4H8 233 aa15.21■□□□□ 0.03
SNF8-206ENST00000509989 RSPH3Q86UC2 560 aa15.21■□□□□ 0.03
SNF8-206ENST00000509989 MYOCDQ8IZQ8 938 aa15.21■□□□□ 0.03
SNF8-206ENST00000509989 PIGOQ8TEQ8 1089 aa15.21■□□□□ 0.03
SNF8-206ENST00000509989 SLC9A7Q96T83 725 aa15.21■□□□□ 0.03
SNF8-206ENST00000509989 MTIF3Q9H2K0 278 aaKnown RBP15.21■□□□□ 0.03
SNF8-206ENST00000509989 CYP26B1Q9NR63 512 aa15.21■□□□□ 0.03
SNF8-206ENST00000509989 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.21■□□□□ 0.03
SNF8-206ENST00000509989 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.21■□□□□ 0.03
SNF8-206ENST00000509989 KDM3AQ9Y4C1 1321 aa15.2■□□□□ 0.02
SNF8-206ENST00000509989 EYSQ5T1H1 3165 aa15.2■□□□□ 0.02
SNF8-206ENST00000509989 REV3LO60673 3130 aa15.2■□□□□ 0.02
SNF8-206ENST00000509989 H3BQV1 296 aa15.2■□□□□ 0.02
SNF8-206ENST00000509989 ENPP3O14638 875 aa15.2■□□□□ 0.02
SNF8-206ENST00000509989 MAFO75444 373 aaPredicted RBP15.2■□□□□ 0.02
SNF8-206ENST00000509989 CDC25AP30304 524 aa15.2■□□□□ 0.02
SNF8-206ENST00000509989 YWHABP31946 246 aaKnown RBP15.2■□□□□ 0.02
SNF8-206ENST00000509989 KCNJ6P48051 423 aa15.2■□□□□ 0.02
SNF8-206ENST00000509989 TBC1D8BQ0IIM8 1120 aa15.2■□□□□ 0.02
SNF8-206ENST00000509989 TSHZ1Q6ZSZ6 1077 aa15.2■□□□□ 0.02
SNF8-206ENST00000509989 FAM228AQ86W67 206 aa15.2■□□□□ 0.02
SNF8-206ENST00000509989 C4orf19Q8IY42 314 aa15.2■□□□□ 0.02
SNF8-206ENST00000509989 TNPO1Q92973 898 aaKnown RBP15.2■□□□□ 0.02
SNF8-206ENST00000509989 PRDM12Q9H4Q4 367 aa15.2■□□□□ 0.02
SNF8-206ENST00000509989 ERVK-5Q9HDB9 667 aa15.2■□□□□ 0.02
SNF8-206ENST00000509989 XPNPEP1Q9NQW7 623 aa15.2■□□□□ 0.02
SNF8-206ENST00000509989 CEP131Q9UPN4 1083 aa15.2■□□□□ 0.02
SNF8-206ENST00000509989 AKT3Q9Y243 479 aa15.2■□□□□ 0.02
SNF8-206ENST00000509989 PCDHA11Q9Y5I1 949 aa15.2■□□□□ 0.02
SNF8-206ENST00000509989 VPS37CA5D8V6 355 aaPredicted RBP15.19■□□□□ 0.02
SNF8-206ENST00000509989 GJB5O95377 273 aa15.19■□□□□ 0.02
SNF8-206ENST00000509989 IBSPP21815 317 aaPredicted RBP15.19■□□□□ 0.02
SNF8-206ENST00000509989 TRAPPC10P48553 1259 aa15.19■□□□□ 0.02
SNF8-206ENST00000509989 GATMP50440 423 aa15.19■□□□□ 0.02
SNF8-206ENST00000509989 GPC3P51654 580 aa15.19■□□□□ 0.02
SNF8-206ENST00000509989 TAP1Q03518 808 aa15.19■□□□□ 0.02
SNF8-206ENST00000509989 ADGRE1Q14246 886 aa15.19■□□□□ 0.02
SNF8-206ENST00000509989 XKR9Q5GH70 373 aa15.19■□□□□ 0.02
SNF8-206ENST00000509989 POTEGQ6S5H5 508 aa15.19■□□□□ 0.02
SNF8-206ENST00000509989 CATSPER3Q86XQ3 398 aa15.19■□□□□ 0.02
SNF8-206ENST00000509989 NME8Q8N427 588 aa15.19■□□□□ 0.02
SNF8-206ENST00000509989 SPRYD3Q8NCJ5 442 aa15.19■□□□□ 0.02
SNF8-206ENST00000509989 IL27Q8NEV9 243 aa15.19■□□□□ 0.02
SNF8-206ENST00000509989 PHOSPHO2Q8TCD6 241 aa15.19■□□□□ 0.02
SNF8-206ENST00000509989 TMEM143Q96AN5 459 aa15.19■□□□□ 0.02
SNF8-206ENST00000509989 CEP170P1Q96L14 293 aa15.19■□□□□ 0.02
SNF8-206ENST00000509989 POLD4Q9HCU8 107 aa15.19■□□□□ 0.02
SNF8-206ENST00000509989 MSRAQ9UJ68 235 aa15.19■□□□□ 0.02
SNF8-206ENST00000509989 NOL7Q9UMY1 257 aaKnown RBP15.19■□□□□ 0.02
SNF8-206ENST00000509989 TRANK1O15050 2925 aa15.18■□□□□ 0.02
SNF8-206ENST00000509989 A0A087WZ62 844 aa15.18■□□□□ 0.02
SNF8-206ENST00000509989 MAGEB2O15479 319 aa15.18■□□□□ 0.02
SNF8-206ENST00000509989 TLL1O43897 1013 aa15.18■□□□□ 0.02
SNF8-206ENST00000509989 SYT1P21579 422 aa15.18■□□□□ 0.02
SNF8-206ENST00000509989 GRIN1Q05586 938 aa15.18■□□□□ 0.02
SNF8-206ENST00000509989 NFX1Q12986 1120 aaKnown RBP15.18■□□□□ 0.02
SNF8-206ENST00000509989 RAB30Q15771 203 aa15.18■□□□□ 0.02
SNF8-206ENST00000509989 SNX21Q969T3 373 aa15.18■□□□□ 0.02
SNF8-206ENST00000509989 FDXACB1Q9BRP7 624 aaPredicted RBP15.18■□□□□ 0.02
SNF8-206ENST00000509989 DHX33Q9H6R0 707 aaKnown RBP15.18■□□□□ 0.02
SNF8-206ENST00000509989 ZSWIM4Q9H7M6 989 aa15.18■□□□□ 0.02
SNF8-206ENST00000509989 ST3GAL5Q9UNP4 418 aa15.18■□□□□ 0.02
SNF8-206ENST00000509989 M0QZ92 97 aa15.17■□□□□ 0.02
SNF8-206ENST00000509989 RPS6KA5O75582 802 aa15.17■□□□□ 0.02
SNF8-206ENST00000509989 CRYBB1P53674 252 aaPredicted RBP15.17■□□□□ 0.02
SNF8-206ENST00000509989 RESTQ13127 1097 aa15.17■□□□□ 0.02
SNF8-206ENST00000509989 PAK2Q13177 524 aa15.17■□□□□ 0.02
SNF8-206ENST00000509989 PPP2R2DQ66LE6 453 aa15.17■□□□□ 0.02
SNF8-206ENST00000509989 CRIPAKQ8N1N5 446 aa15.17■□□□□ 0.02
SNF8-206ENST00000509989 TOP1MTQ969P6 601 aa15.17■□□□□ 0.02
SNF8-206ENST00000509989 ZBED2Q9BTP6 218 aa15.17■□□□□ 0.02
SNF8-206ENST00000509989 MMTAG2Q9BU76 263 aaKnown RBP15.17■□□□□ 0.02
SNF8-206ENST00000509989 SLC28A3Q9HAS3 691 aa15.17■□□□□ 0.02
SNF8-206ENST00000509989 SUCLA2Q9P2R7 463 aaPredicted RBP15.17■□□□□ 0.02
SNF8-206ENST00000509989 MTMR6Q9Y217 621 aa15.17■□□□□ 0.02
SNF8-206ENST00000509989 KIF3AQ9Y496 699 aa15.17■□□□□ 0.02
SNF8-206ENST00000509989 PRRC2BQ5JSZ5 2229 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms