RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	GPRASP2	Q96D09	838 aa		11.66	□□□□□ -0.54
PTPN20-222	ENST00000509774	C8orf76	Q96K31	380 aa		11.66	□□□□□ -0.54
PTPN20-222	ENST00000509774	AIFM3	Q96NN9	605 aa		11.66	□□□□□ -0.54
PTPN20-222	ENST00000509774	NAP1L4	Q99733	375 aa	Known RBP	11.66	□□□□□ -0.54
PTPN20-222	ENST00000509774	SENP7	Q9BQF6	1050 aa		11.66	□□□□□ -0.54
PTPN20-222	ENST00000509774	ANO3	Q9BYT9	981 aa		11.66	□□□□□ -0.54
PTPN20-222	ENST00000509774	TSHZ2	Q9NRE2	1034 aa		11.66	□□□□□ -0.54
PTPN20-222	ENST00000509774	SMC3	Q9UQE7	1217 aa		11.66	□□□□□ -0.54
PTPN20-222	ENST00000509774	MYH6	P13533	1939 aa		11.66	□□□□□ -0.54
PTPN20-222	ENST00000509774	SPATA31C2	B4DYI2	1134 aa		11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	FIBP	O43427	364 aa		11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	ZEB2	O60315	1214 aa		11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	CIITA	P33076	1130 aa		11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	KRT2	P35908	639 aa		11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	COPS2	P61201	443 aa		11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	MRPS9	P82933	396 aa	Known RBP	11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	ARHGAP4	P98171	946 aa		11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	SMAD4	Q13485	552 aa	Known RBP	11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	CEP55	Q53EZ4	464 aa		11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	BRDT	Q58F21	947 aa	Predicted RBP	11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	JAKMIP3	Q5VZ66	844 aa		11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	CCDC62	Q6P9F0	684 aa		11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	MOXD1	Q6UVY6	613 aa		11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	FRMD5	Q7Z6J6	570 aa		11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	FBXO16	Q8IX29	292 aa	Predicted RBP	11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	RETREG2	Q8NC44	543 aa		11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	NKD2	Q969F2	451 aa	Predicted RBP	11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	EMID1	Q96A84	441 aa	Predicted RBP	11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	AP5M1	Q9H0R1	490 aa		11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	FOXP1	Q9H334	677 aa	Predicted RBP	11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	NSUN3	Q9H649	340 aa	Known RBP	11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	KCNJ14	Q9UNX9	436 aa		11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	UBIAD1	Q9Y5Z9	338 aa		11.65	□□□□□ -0.54
PTPN20-222	ENST00000509774	FASN	P49327	2511 aa	Known RBP	11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	CYP3A7-CYP3A51P	A0A087WV96	503 aa		11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	CCDC194	A0A1B0GVG4	234 aa		11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	MEIS1	O00470	390 aa		11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	KPNA6	O60684	536 aa		11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	PDGFB	P01127	241 aa	Predicted RBP	11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	TXN	P10599	105 aa	Known RBP	11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	CYP3A7	P24462	503 aa		11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	GJB2	P29033	226 aa		11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	ZNF76	P36508	570 aa		11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	LAMC2	Q13753	1193 aa		11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	NEDD9	Q14511	834 aa		11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	NONO	Q15233	471 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	EPC2	Q52LR7	807 aa		11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	FAM117B	Q6P1L5	589 aa		11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	SEPT14	Q6ZU15	432 aa		11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	EEPD1	Q7L9B9	569 aa		11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	PPP1R13L	Q8WUF5	828 aa		11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	MXRA8	Q9BRK3	442 aa		11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	JADE2	Q9NQC1	790 aa		11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	PDGFC	Q9NRA1	345 aa		11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	DDX41	Q9UJV9	622 aa	Known RBP	11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	MRVI1	Q9Y6F6	885 aa		11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	FAM208B	Q5VWN6	2430 aa		11.64	□□□□□ -0.55
PTPN20-222	ENST00000509774	LOC730098	B7Z3J9	87 aa		11.63	□□□□□ -0.55
PTPN20-222	ENST00000509774		H3BNC9	293 aa		11.63	□□□□□ -0.55
PTPN20-222	ENST00000509774	TBX10	O75333	385 aa		11.63	□□□□□ -0.55
PTPN20-222	ENST00000509774	GH1	P01241	217 aa		11.63	□□□□□ -0.55
PTPN20-222	ENST00000509774	GCFC2	P16383	781 aa	Known RBP	11.63	□□□□□ -0.55
PTPN20-222	ENST00000509774	SET	Q01105	290 aa	Predicted RBP	11.63	□□□□□ -0.55
PTPN20-222	ENST00000509774	COL9A2	Q14055	689 aa	Predicted RBP	11.63	□□□□□ -0.55
PTPN20-222	ENST00000509774	IL31RA	Q8NI17	732 aa		11.63	□□□□□ -0.55
PTPN20-222	ENST00000509774	KCNV2	Q8TDN2	545 aa		11.63	□□□□□ -0.55
PTPN20-222	ENST00000509774	TBCK	Q8TEA7	893 aa		11.63	□□□□□ -0.55
PTPN20-222	ENST00000509774	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.63	□□□□□ -0.55
PTPN20-222	ENST00000509774	TMEM260	Q9NX78	707 aa		11.63	□□□□□ -0.55
PTPN20-222	ENST00000509774	DDX49	Q9Y6V7	483 aa	Known RBP	11.63	□□□□□ -0.55
PTPN20-222	ENST00000509774	FRYL	O94915	3013 aa		11.63	□□□□□ -0.55
PTPN20-222	ENST00000509774		A6NJR5	290 aa		11.62	□□□□□ -0.55
PTPN20-222	ENST00000509774	BTBD18	B2RXH4	712 aa		11.62	□□□□□ -0.55
PTPN20-222	ENST00000509774	PPFIA4	O75335	1185 aa		11.62	□□□□□ -0.55
PTPN20-222	ENST00000509774	ITGB5	P18084	799 aa		11.62	□□□□□ -0.55
PTPN20-222	ENST00000509774	U2AF2	P26368	475 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
PTPN20-222	ENST00000509774	CPT1A	P50416	773 aa		11.62	□□□□□ -0.55
PTPN20-222	ENST00000509774	PURA	Q00577	322 aa	Known RBP	11.62	□□□□□ -0.55
PTPN20-222	ENST00000509774	GPM6B	Q13491	265 aa		11.62	□□□□□ -0.55
PTPN20-222	ENST00000509774	BFSP2	Q13515	415 aa		11.62	□□□□□ -0.55
PTPN20-222	ENST00000509774	MTMR1	Q13613	665 aa		11.62	□□□□□ -0.55
PTPN20-222	ENST00000509774	BECN1	Q14457	450 aa		11.62	□□□□□ -0.55
PTPN20-222	ENST00000509774	CBX2	Q14781	532 aa	Predicted RBP	11.62	□□□□□ -0.55
PTPN20-222	ENST00000509774	FAM47C	Q5HY64	1035 aa		11.62	□□□□□ -0.55
PTPN20-222	ENST00000509774	CELF3	Q5SZQ8	465 aa	Known RBP	11.62	□□□□□ -0.55
PTPN20-222	ENST00000509774	LARP1B	Q659C4	914 aa	Known RBP	11.62	□□□□□ -0.55
PTPN20-222	ENST00000509774	PPP4R3A	Q6IN85	833 aa		11.62	□□□□□ -0.55
PTPN20-222	ENST00000509774	CNKSR3	Q6P9H4	555 aa		11.62	□□□□□ -0.55
PTPN20-222	ENST00000509774	DIS3L2	Q8IYB7	885 aa	Known RBP	11.62	□□□□□ -0.55
PTPN20-222	ENST00000509774	TNFRSF25	Q93038	417 aa		11.62	□□□□□ -0.55
PTPN20-222	ENST00000509774	COL26A1	Q96A83	441 aa		11.62	□□□□□ -0.55
PTPN20-222	ENST00000509774	KCNH7	Q9NS40	1196 aa		11.62	□□□□□ -0.55
PTPN20-222	ENST00000509774	RTEL1	Q9NZ71	1219 aa		11.62	□□□□□ -0.55
PTPN20-222	ENST00000509774	OTOGL	Q3ZCN5	2332 aa		11.61	□□□□□ -0.55
PTPN20-222	ENST00000509774	ABHD14A-ACY1	A0A1B0GW23	586 aa		11.61	□□□□□ -0.55
PTPN20-222	ENST00000509774		H3BQV1	296 aa		11.61	□□□□□ -0.55
PTPN20-222	ENST00000509774	NCK2	O43639	380 aa		11.61	□□□□□ -0.55
PTPN20-222	ENST00000509774	HSP90AA1	P07900	732 aa	Known RBP	11.61	□□□□□ -0.55
PTPN20-222	ENST00000509774	TRAPPC10	P48553	1259 aa		11.61	□□□□□ -0.55
PTPN20-222	ENST00000509774	HYAL1	Q12794	435 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms