RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 ZC2HC1CQ53FD0 456 aaPredicted RBP19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 FAM178BQ8IXR5 827 aa19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 SYCE1Q8N0S2 351 aa19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 LRRC57Q8N9N7 239 aa19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 SUPT20HQ8NEM7 779 aa19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 TPCN2Q8NHX9 752 aa19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 ACER1Q8TDN7 264 aa19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 AJAP1Q9UKB5 411 aaPredicted RBP19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 ZNF646O15015 1829 aaPredicted RBP19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 FRMPD4Q14CM0 1322 aa19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 ESYT3A0FGR9 886 aa19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 CEP104O60308 925 aa19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 PPFIA4O75335 1185 aa19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 GFPT2O94808 682 aa19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 CFAP58Q5T655 872 aa19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 GJB7Q6PEY0 223 aa19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 SLC30A10Q6XR72 485 aa19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 SRLQ86TD4 932 aa19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 ACTRT1Q8TDG2 376 aa19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 WHAMMQ8TF30 809 aa19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 ZNF577Q9BSK1 485 aa19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 RANBP17Q9H2T7 1088 aaKnown RBP19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 TMEM59LQ9UK28 342 aa19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 ODF2LQ9ULJ1 636 aa19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 UBXN2AP68543 259 aa19.55■□□□□ 0.72
CCHCR1-228ENST00000509552 SETQ01105 290 aaPredicted RBP19.55■□□□□ 0.72
CCHCR1-228ENST00000509552 ZNF720Q7Z2F6 126 aa19.55■□□□□ 0.72
CCHCR1-228ENST00000509552 FMNL3Q8IVF7 1028 aa19.55■□□□□ 0.72
CCHCR1-228ENST00000509552 KLHL7Q8IXQ5 586 aa19.55■□□□□ 0.72
CCHCR1-228ENST00000509552 U2AF1L4Q8WU68 220 aaKnown RBP19.55■□□□□ 0.72
CCHCR1-228ENST00000509552 ZIM3Q96PE6 472 aa19.55■□□□□ 0.72
CCHCR1-228ENST00000509552 NENFQ9UMX5 172 aa19.55■□□□□ 0.72
CCHCR1-228ENST00000509552 RRP15Q9Y3B9 282 aaKnown RBP19.55■□□□□ 0.72
CCHCR1-228ENST00000509552 ZSCAN5CA6NGD5 496 aaPredicted RBP19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 TMCO5BA8MYB1 307 aa19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 VIL1P09327 827 aaKnown RBP19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 POLD1P28340 1107 aa19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 FMO5P49326 533 aa19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 IRX5P78411 483 aaPredicted RBP19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 SF3B2Q13435 895 aaKnown RBP19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 KIAA1755Q5JYT7 1200 aa19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 PEX26Q7Z412 305 aa19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 MREGQ8N565 214 aa19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 CASKIN2Q8WXE0 1202 aa19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 CCDC43Q96MW1 224 aaKnown RBP19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 CAPS2Q9BXY5 557 aa19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 STK33Q9BYT3 514 aa19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 PLEKHA4Q9H4M7 779 aa19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 RSPH14Q9UHP6 348 aa19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 DDX3XO00571 662 aaKnown RBP eCLIP19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 ZBTB39O15060 712 aa19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 PPIP5K2O43314 1243 aa19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 RAD51CO43502 376 aa19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 CHRNA5P30532 468 aa19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 SOX5P35711 763 aa19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 ZNF131P52739 623 aa19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 NPEPPSP55786 919 aa19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 ODR4Q5SWX8 454 aa19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 FOXR1Q6PIV2 292 aa19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 CALR3Q96L12 384 aaKnown RBP19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 TEKT3Q9BXF9 490 aa19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 ZBTB21Q9ULJ3 1066 aa19.54■□□□□ 0.72
CCHCR1-228ENST00000509552 PGRMC1O00264 195 aaKnown RBP19.53■□□□□ 0.72
CCHCR1-228ENST00000509552 EVI5O60447 810 aa19.53■□□□□ 0.72
CCHCR1-228ENST00000509552 CCDC172P0C7W6 258 aa19.53■□□□□ 0.72
CCHCR1-228ENST00000509552 LMNB1P20700 586 aa19.53■□□□□ 0.72
CCHCR1-228ENST00000509552 PPP2R5AQ15172 486 aa19.53■□□□□ 0.72
CCHCR1-228ENST00000509552 DNAAF5Q86Y56 855 aa19.53■□□□□ 0.72
CCHCR1-228ENST00000509552 FAM151AQ8WW52 585 aa19.53■□□□□ 0.72
CCHCR1-228ENST00000509552 IKZF4Q9H2S9 585 aa19.53■□□□□ 0.72
CCHCR1-228ENST00000509552 GOLPH3Q9H4A6 298 aa19.53■□□□□ 0.72
CCHCR1-228ENST00000509552 MYO1CO00159 1063 aa19.53■□□□□ 0.72
CCHCR1-228ENST00000509552 FAM153BP0C7A2 387 aa19.53■□□□□ 0.72
CCHCR1-228ENST00000509552 CYP2J2P51589 502 aa19.53■□□□□ 0.72
CCHCR1-228ENST00000509552 FAM153CQ494X1 144 aa19.53■□□□□ 0.72
CCHCR1-228ENST00000509552 DAAM2Q86T65 1068 aa19.53■□□□□ 0.72
CCHCR1-228ENST00000509552 FAM160B2Q86V87 743 aa19.53■□□□□ 0.72
CCHCR1-228ENST00000509552 SCFD2Q8WU76 684 aa19.53■□□□□ 0.72
CCHCR1-228ENST00000509552 UNC45AQ9H3U1 944 aa19.53■□□□□ 0.72
CCHCR1-228ENST00000509552 AGPAT3Q9NRZ7 376 aa19.53■□□□□ 0.72
CCHCR1-228ENST00000509552 SUCLA2Q9P2R7 463 aaPredicted RBP19.53■□□□□ 0.72
CCHCR1-228ENST00000509552 FAM153AQ9UHL3 310 aa19.53■□□□□ 0.72
CCHCR1-228ENST00000509552 DNAJC12Q9UKB3 198 aa19.53■□□□□ 0.72
CCHCR1-228ENST00000509552 CLRN2A0PK11 232 aa19.52■□□□□ 0.72
CCHCR1-228ENST00000509552 ARHGEF35A5YM69 484 aa19.52■□□□□ 0.72
CCHCR1-228ENST00000509552 SPDYE2BA6NHP3 402 aa19.52■□□□□ 0.72
CCHCR1-228ENST00000509552 A6NNZ2 444 aa19.52■□□□□ 0.72
CCHCR1-228ENST00000509552 F8VZ95 297 aa19.52■□□□□ 0.72
CCHCR1-228ENST00000509552 SPDYE6P0CI01 402 aa19.52■□□□□ 0.72
CCHCR1-228ENST00000509552 IRAK1P51617 712 aa19.52■□□□□ 0.72
CCHCR1-228ENST00000509552 GUCY2FP51841 1108 aa19.52■□□□□ 0.72
CCHCR1-228ENST00000509552 COG2Q14746 738 aa19.52■□□□□ 0.72
CCHCR1-228ENST00000509552 TUBB8Q3ZCM7 444 aa19.52■□□□□ 0.72
CCHCR1-228ENST00000509552 SLFN11Q7Z7L1 901 aa19.52■□□□□ 0.72
CCHCR1-228ENST00000509552 KSR1Q8IVT5 923 aa19.52■□□□□ 0.72
CCHCR1-228ENST00000509552 EIF1ADQ8N9N8 165 aaKnown RBP19.52■□□□□ 0.72
CCHCR1-228ENST00000509552 C7orf43Q8WVR3 580 aa19.52■□□□□ 0.72
CCHCR1-228ENST00000509552 FIZ1Q96SL8 496 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms