RNA–Protein interactions for RNA: ENST00000509148.1

RACK1-221, Transcript of receptor for activated C kinase 1, human

TSL 2

Gene RACK1, Length 888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-221	ENST00000509148	STK36	Q9NRP7	1315 aa		11.25	□□□□□ -0.61
RACK1-221	ENST00000509148	COL4A4	P53420	1690 aa	Predicted RBP	11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	SI	P14410	1827 aa		11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	CCDC194	A0A1B0GVG4	234 aa		11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	EDIL3	O43854	480 aa		11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	PFKFB2	O60825	505 aa		11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	GPR32	O75388	356 aa		11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	PSMD10	O75832	226 aa		11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	VTN	P04004	478 aa		11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	LINC00271	P0C7V0	271 aa		11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	PRKCE	Q02156	737 aa		11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	TBC1D8B	Q0IIM8	1120 aa		11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	SCRN1	Q12765	414 aa		11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	TCEAL5	Q5H9L2	206 aa		11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	TMEM40	Q8WWA1	233 aa		11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	PABPC5	Q96DU9	382 aa	Known RBP	11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	NECAB3	Q96P71	396 aa	Predicted RBP	11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	NAP1L4	Q99733	375 aa	Known RBP	11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	ADAM2	Q99965	735 aa		11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	UNC45A	Q9H3U1	944 aa		11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	CDHR5	Q9HBB8	845 aa		11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	AAAS	Q9NRG9	546 aa		11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	DDX25	Q9UHL0	483 aa	Known RBP	11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	FAM50B	Q9Y247	325 aa		11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	MRPL42	Q9Y6G3	142 aa	Known RBP	11.24	□□□□□ -0.61
RACK1-221	ENST00000509148	GRM6	O15303	877 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	ZNF862	O60290	1169 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	DKC1	O60832	514 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	TDP2	O95551	362 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	MMP1	P03956	469 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	GCFC2	P16383	781 aa	Known RBP	11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	ZSCAN20	P17040	1043 aa	Predicted RBP	11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	IBSP	P21815	317 aa	Predicted RBP	11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	EIF4B	P23588	611 aa	Known RBP	11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	DNM2	P50570	870 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	CLCN3	P51790	818 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	NLRP11	P59045	1033 aa	Known RBP	11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	LETM2	Q2VYF4	491 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	PAN2	Q504Q3	1202 aa	Known RBP	11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	XKR3	Q5GH77	459 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	EP400NL	Q6ZTU2	488 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	NEK8	Q86SG6	692 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	FAM228A	Q86W67	206 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	NEK9	Q8TD19	979 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	FAM20A	Q96MK3	541 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	MBOAT7	Q96N66	472 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	SCLT1	Q96NL6	688 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	AIFM3	Q96NN9	605 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	PPP1R16B	Q96T49	567 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	JPH2	Q9BR39	696 aa	Predicted RBP	11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	PHF20	Q9BVI0	1012 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	C1QTNF1	Q9BXJ1	281 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	NIFK	Q9BYG3	293 aa	Known RBP	11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	ELAC1	Q9H777	363 aa	Known RBP	11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	ATP6V0A4	Q9HBG4	840 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	TPCN1	Q9ULQ1	816 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	KCNJ14	Q9UNX9	436 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	PLAGL2	Q9UPG8	496 aa		11.23	□□□□□ -0.61
RACK1-221	ENST00000509148	TBKBP1	A7MCY6	615 aa		11.22	□□□□□ -0.61
RACK1-221	ENST00000509148		C9IYK1	514 aa		11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	HOXA2	O43364	376 aa		11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	MARCH6	O60337	910 aa		11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	MGEA5	O60502	916 aa		11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	PSMC5	P62195	406 aa		11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	FAM189B	P81408	668 aa		11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	COL19A1	Q14993	1142 aa		11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	NPY5R	Q15761	445 aa		11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	UGCG	Q16739	394 aa		11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	CSPP1	Q1MSJ5	1256 aa		11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	INF2	Q27J81	1249 aa		11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	SPOUT1	Q5T280	376 aa	Known RBP	11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	PPP4R3A	Q6IN85	833 aa		11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	LRRC71	Q8N4P6	559 aa		11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	LINC01465	Q8N7H1	131 aa		11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	ETNPPL	Q8TBG4	499 aa		11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	ADAMTS10	Q9H324	1103 aa		11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	BRMS1	Q9HCU9	246 aa		11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	TMEM161A	Q9NX61	479 aa		11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	CLDND1	Q9NY35	253 aa		11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	ORC3	Q9UBD5	711 aa	Predicted RBP	11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	PCDHB12	Q9Y5F1	795 aa		11.22	□□□□□ -0.61
RACK1-221	ENST00000509148	TTC3	P53804	2025 aa		11.21	□□□□□ -0.61
RACK1-221	ENST00000509148	DDX11L8	A8MPP1	907 aa		11.21	□□□□□ -0.61
RACK1-221	ENST00000509148	TBX3	O15119	743 aa		11.21	□□□□□ -0.61
RACK1-221	ENST00000509148	DARS	P14868	501 aa	Known RBP	11.21	□□□□□ -0.61
RACK1-221	ENST00000509148	GPC3	P51654	580 aa		11.21	□□□□□ -0.61
RACK1-221	ENST00000509148	AK2	P54819	239 aa		11.21	□□□□□ -0.61
RACK1-221	ENST00000509148	UBE3A	Q05086	875 aa		11.21	□□□□□ -0.61
RACK1-221	ENST00000509148	TARBP2	Q15633	366 aa	Known RBP	11.21	□□□□□ -0.61
RACK1-221	ENST00000509148	MTERF2	Q49AM1	385 aa		11.21	□□□□□ -0.61
RACK1-221	ENST00000509148	B3GNT9	Q6UX72	402 aa		11.21	□□□□□ -0.61
RACK1-221	ENST00000509148	EXOC8	Q8IYI6	725 aa		11.21	□□□□□ -0.61
RACK1-221	ENST00000509148	KLHL23	Q8NBE8	558 aa		11.21	□□□□□ -0.61
RACK1-221	ENST00000509148	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.21	□□□□□ -0.61
RACK1-221	ENST00000509148	SPPL3	Q8TCT6	385 aa		11.21	□□□□□ -0.61
RACK1-221	ENST00000509148	NLRP7	Q8WX94	980 aa		11.21	□□□□□ -0.61
RACK1-221	ENST00000509148	GJA10	Q969M2	543 aa		11.21	□□□□□ -0.61
RACK1-221	ENST00000509148	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.21	□□□□□ -0.61

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