RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 PTPROQ16827 1216 aa20.95■□□□□ 0.94
UBE3D-207ENST00000509102 TMEM266Q2M3C6 531 aa20.95■□□□□ 0.94
UBE3D-207ENST00000509102 B3GNT9Q6UX72 402 aa20.95■□□□□ 0.94
UBE3D-207ENST00000509102 NPAS4Q8IUM7 802 aa20.95■□□□□ 0.94
UBE3D-207ENST00000509102 FAM184AQ8NB25 1140 aa20.95■□□□□ 0.94
UBE3D-207ENST00000509102 ATXN2LQ8WWM7 1075 aaKnown RBP20.95■□□□□ 0.94
UBE3D-207ENST00000509102 PPP1R16BQ96T49 567 aa20.95■□□□□ 0.94
UBE3D-207ENST00000509102 OSMRQ99650 979 aa20.95■□□□□ 0.94
UBE3D-207ENST00000509102 JPH2Q9BR39 696 aaPredicted RBP20.95■□□□□ 0.94
UBE3D-207ENST00000509102 C17orf80Q9BSJ5 609 aa20.95■□□□□ 0.94
UBE3D-207ENST00000509102 ADGRA3Q8IWK6 1321 aa20.95■□□□□ 0.94
UBE3D-207ENST00000509102 COL4A6Q14031 1691 aa20.94■□□□□ 0.94
UBE3D-207ENST00000509102 DDX11L8A8MPP1 907 aa20.94■□□□□ 0.94
UBE3D-207ENST00000509102 BTBD18B2RXH4 712 aa20.94■□□□□ 0.94
UBE3D-207ENST00000509102 ST18O60284 1047 aa20.94■□□□□ 0.94
UBE3D-207ENST00000509102 QARSP47897 775 aaKnown RBP20.94■□□□□ 0.94
UBE3D-207ENST00000509102 BTG3Q14201 252 aaPredicted RBP20.94■□□□□ 0.94
UBE3D-207ENST00000509102 MTERF2Q49AM1 385 aa20.94■□□□□ 0.94
UBE3D-207ENST00000509102 SPRED2Q7Z698 418 aa20.94■□□□□ 0.94
UBE3D-207ENST00000509102 EXOC8Q8IYI6 725 aa20.94■□□□□ 0.94
UBE3D-207ENST00000509102 LRRC71Q8N4P6 559 aa20.94■□□□□ 0.94
UBE3D-207ENST00000509102 BANK1Q8NDB2 785 aa20.94■□□□□ 0.94
UBE3D-207ENST00000509102 C8orf76Q96K31 380 aa20.94■□□□□ 0.94
UBE3D-207ENST00000509102 NIFKQ9BYG3 293 aaKnown RBP20.94■□□□□ 0.94
UBE3D-207ENST00000509102 C1orf112Q9NSG2 853 aa20.94■□□□□ 0.94
UBE3D-207ENST00000509102 NOC2LQ9Y3T9 749 aaKnown RBP20.94■□□□□ 0.94
UBE3D-207ENST00000509102 P4HBP07237 508 aaKnown RBP20.93■□□□□ 0.94
UBE3D-207ENST00000509102 RBM25P49756 843 aaKnown RBP20.93■□□□□ 0.94
UBE3D-207ENST00000509102 NLRP11P59045 1033 aaKnown RBP20.93■□□□□ 0.94
UBE3D-207ENST00000509102 GNL2Q13823 731 aaKnown RBP20.93■□□□□ 0.94
UBE3D-207ENST00000509102 RABEP1Q15276 862 aa20.93■□□□□ 0.94
UBE3D-207ENST00000509102 AAK1Q2M2I8 961 aa20.93■□□□□ 0.94
UBE3D-207ENST00000509102 EPC2Q52LR7 807 aa20.93■□□□□ 0.94
UBE3D-207ENST00000509102 TJAP1Q5JTD0 557 aa20.93■□□□□ 0.94
UBE3D-207ENST00000509102 TMEM192Q8IY95 271 aa20.93■□□□□ 0.94
UBE3D-207ENST00000509102 ERVK-5Q9HDB9 667 aa20.93■□□□□ 0.94
UBE3D-207ENST00000509102 VAV3Q9UKW4 847 aa20.93■□□□□ 0.94
UBE3D-207ENST00000509102 ST3GAL5Q9UNP4 418 aa20.93■□□□□ 0.94
UBE3D-207ENST00000509102 EVPLQ92817 2033 aa20.92■□□□□ 0.94
UBE3D-207ENST00000509102 RBAK-RBAKDNI3L0D1 243 aa20.92■□□□□ 0.94
UBE3D-207ENST00000509102 NEMFO60524 1076 aa20.92■□□□□ 0.94
UBE3D-207ENST00000509102 GPR32O75388 356 aa20.92■□□□□ 0.94
UBE3D-207ENST00000509102 MRPS5P82675 430 aaKnown RBP20.92■□□□□ 0.94
UBE3D-207ENST00000509102 CALCRLQ16602 461 aa20.92■□□□□ 0.94
UBE3D-207ENST00000509102 EARS2Q5JPH6 523 aaKnown RBP20.92■□□□□ 0.94
UBE3D-207ENST00000509102 NCAPH2Q6IBW4 605 aa20.92■□□□□ 0.94
UBE3D-207ENST00000509102 NLRP7Q8WX94 980 aa20.92■□□□□ 0.94
UBE3D-207ENST00000509102 TNFRSF25Q93038 417 aa20.92■□□□□ 0.94
UBE3D-207ENST00000509102 CDHR5Q9HBB8 845 aa20.92■□□□□ 0.94
UBE3D-207ENST00000509102 PPME1Q9Y570 386 aa20.92■□□□□ 0.94
UBE3D-207ENST00000509102 PCDHB7Q9Y5E2 793 aa20.92■□□□□ 0.94
UBE3D-207ENST00000509102 FAM205CA6NFA0 338 aa20.91■□□□□ 0.94
UBE3D-207ENST00000509102 LPXNO60711 386 aa20.91■□□□□ 0.94
UBE3D-207ENST00000509102 DGKIO75912 1065 aa20.91■□□□□ 0.94
UBE3D-207ENST00000509102 ZSCAN20P17040 1043 aaPredicted RBP20.91■□□□□ 0.94
UBE3D-207ENST00000509102 IBSPP21815 317 aaPredicted RBP20.91■□□□□ 0.94
UBE3D-207ENST00000509102 CTNNB1P35222 781 aa20.91■□□□□ 0.94
UBE3D-207ENST00000509102 SARSP49591 514 aaKnown RBP20.91■□□□□ 0.94
UBE3D-207ENST00000509102 EPHA7Q15375 998 aa20.91■□□□□ 0.94
UBE3D-207ENST00000509102 TARBP2Q15633 366 aaKnown RBP20.91■□□□□ 0.94
UBE3D-207ENST00000509102 SLC24A5Q71RS6 500 aa20.91■□□□□ 0.94
UBE3D-207ENST00000509102 OTUD6AQ7L8S5 288 aa20.91■□□□□ 0.94
UBE3D-207ENST00000509102 LINC01465Q8N7H1 131 aa20.91■□□□□ 0.94
UBE3D-207ENST00000509102 TMEM40Q8WWA1 233 aa20.91■□□□□ 0.94
UBE3D-207ENST00000509102 LINC01599Q8WXQ3 324 aa20.91■□□□□ 0.94
UBE3D-207ENST00000509102 SLC7A3Q8WY07 619 aa20.91■□□□□ 0.94
UBE3D-207ENST00000509102 HAS1Q92839 578 aa20.91■□□□□ 0.94
UBE3D-207ENST00000509102 ADAM2Q99965 735 aa20.91■□□□□ 0.94
UBE3D-207ENST00000509102 TMX1Q9H3N1 280 aa20.91■□□□□ 0.94
UBE3D-207ENST00000509102 PCDHA12Q9UN75 941 aa20.91■□□□□ 0.94
UBE3D-207ENST00000509102 COG5Q9UP83 839 aa20.91■□□□□ 0.94
UBE3D-207ENST00000509102 KIF3AQ9Y496 699 aa20.91■□□□□ 0.94
UBE3D-207ENST00000509102 WDR81Q562E7 1941 aa20.9■□□□□ 0.94
UBE3D-207ENST00000509102 COL4A4P53420 1690 aaPredicted RBP20.9■□□□□ 0.94
UBE3D-207ENST00000509102 EML1O00423 815 aa20.9■□□□□ 0.94
UBE3D-207ENST00000509102 RB1P06400 928 aa20.9■□□□□ 0.94
UBE3D-207ENST00000509102 EIF4BP23588 611 aaKnown RBP20.9■□□□□ 0.94
UBE3D-207ENST00000509102 GPC3P51654 580 aa20.9■□□□□ 0.94
UBE3D-207ENST00000509102 GUCY1B3Q02153 619 aa20.9■□□□□ 0.94
UBE3D-207ENST00000509102 ST3GAL1Q11201 340 aa20.9■□□□□ 0.94
UBE3D-207ENST00000509102 GPM6BQ13491 265 aa20.9■□□□□ 0.94
UBE3D-207ENST00000509102 RTN4RL1Q86UN2 441 aaPredicted RBP20.9■□□□□ 0.94
UBE3D-207ENST00000509102 FAM228AQ86W67 206 aa20.9■□□□□ 0.94
UBE3D-207ENST00000509102 CMTR2Q8IYT2 770 aaKnown RBP20.9■□□□□ 0.94
UBE3D-207ENST00000509102 KIF2CQ99661 725 aa20.9■□□□□ 0.94
UBE3D-207ENST00000509102 C11orf84Q9BUA3 381 aaPredicted RBP20.9■□□□□ 0.94
UBE3D-207ENST00000509102 PRDM6Q9NQX0 595 aa20.9■□□□□ 0.94
UBE3D-207ENST00000509102 RGS18Q9NS28 235 aa20.9■□□□□ 0.94
UBE3D-207ENST00000509102 PRRC2BQ5JSZ5 2229 aaKnown RBP20.9■□□□□ 0.94
UBE3D-207ENST00000509102 TTC3P53804 2025 aa20.9■□□□□ 0.94
UBE3D-207ENST00000509102 LOXHD1Q8IVV2 1947 aa20.89■□□□□ 0.93
UBE3D-207ENST00000509102 H3BNC9 293 aa20.89■□□□□ 0.93
UBE3D-207ENST00000509102 ZNF689Q96CS4 500 aaPredicted RBP20.89■□□□□ 0.93
UBE3D-207ENST00000509102 MRPL38Q96DV4 380 aaKnown RBP20.89■□□□□ 0.93
UBE3D-207ENST00000509102 CEP170P1Q96L14 293 aa20.89■□□□□ 0.93
UBE3D-207ENST00000509102 ASB2Q96Q27 587 aa20.89■□□□□ 0.93
UBE3D-207ENST00000509102 LXNQ9BS40 222 aa20.89■□□□□ 0.93
UBE3D-207ENST00000509102 COL25A1Q9BXS0 654 aaPredicted RBP20.89■□□□□ 0.93
UBE3D-207ENST00000509102 GCOM2Q9BZD3 368 aaPredicted RBP20.89■□□□□ 0.93
UBE3D-207ENST00000509102 INO80BQ9C086 356 aaPredicted RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms