RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 GLYCTKQ8IVS8 523 aa15.51■□□□□ 0.07
TRIM41-204ENST00000508930 SCFD1Q8WVM8 642 aa15.51■□□□□ 0.07
TRIM41-204ENST00000508930 KIF9Q9HAQ2 790 aa15.51■□□□□ 0.07
TRIM41-204ENST00000508930 USP15Q9Y4E8 981 aaPredicted RBP15.51■□□□□ 0.07
TRIM41-204ENST00000508930 POTEB3A0JP26 581 aa15.51■□□□□ 0.07
TRIM41-204ENST00000508930 ENO4A6NNW6 628 aa15.51■□□□□ 0.07
TRIM41-204ENST00000508930 POTECB2RU33 542 aa15.51■□□□□ 0.07
TRIM41-204ENST00000508930 TCP11X1B4DZS4 312 aa15.51■□□□□ 0.07
TRIM41-204ENST00000508930 ERFEQ4G0M1 354 aa15.51■□□□□ 0.07
TRIM41-204ENST00000508930 POTEBQ6S5H4 581 aa15.51■□□□□ 0.07
TRIM41-204ENST00000508930 YIPF3Q9GZM5 350 aa15.51■□□□□ 0.07
TRIM41-204ENST00000508930 SEMA4AQ9H3S1 761 aa15.51■□□□□ 0.07
TRIM41-204ENST00000508930 TMOD4Q9NZQ9 345 aa15.51■□□□□ 0.07
TRIM41-204ENST00000508930 KDM3AQ9Y4C1 1321 aa15.51■□□□□ 0.07
TRIM41-204ENST00000508930 CASZ1Q86V15 1759 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 FAM187AA6NFU0 413 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 PON1P27169 355 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 CRKLP46109 303 aaKnown RBP15.5■□□□□ 0.07
TRIM41-204ENST00000508930 EIF6P56537 245 aaKnown RBP15.5■□□□□ 0.07
TRIM41-204ENST00000508930 SLC35G2Q8TBE7 412 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 PGM2Q96G03 612 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 TRIM7Q9C029 511 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 MYH7BA7E2Y1 1941 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 USP17L5A8MUK1 530 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 CALUO43852 315 aaPredicted RBP15.5■□□□□ 0.07
TRIM41-204ENST00000508930 MMP13P45452 471 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 ECM1Q16610 540 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 BZW1Q7L1Q6 419 aaKnown RBP15.5■□□□□ 0.07
TRIM41-204ENST00000508930 FBXO33Q7Z6M2 555 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 CCDC105Q8IYK2 499 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 SLC12A4Q9UP95 1085 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 AGAP1Q9UPQ3 857 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 CLIC2O15247 247 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 EVI5O60447 810 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 RPL13P26373 211 aaKnown RBP15.5■□□□□ 0.07
TRIM41-204ENST00000508930 PTENP60484 403 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 BIRC2Q13490 618 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 TAF11Q15544 211 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 TMEM119Q4V9L6 283 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 PIGWQ7Z7B1 504 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 RASGEF1CQ8N431 466 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 GDAP1Q8TB36 358 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 RNF25Q96BH1 459 aaPredicted RBP15.5■□□□□ 0.07
TRIM41-204ENST00000508930 PTPN22Q9Y2R2 807 aa15.5■□□□□ 0.07
TRIM41-204ENST00000508930 DDX3XO00571 662 aaKnown RBP eCLIP15.49■□□□□ 0.072e-9■■■■□ 25.2
TRIM41-204ENST00000508930 CCND1P24385 295 aa15.49■□□□□ 0.07
TRIM41-204ENST00000508930 RIPK1Q13546 671 aa15.49■□□□□ 0.07
TRIM41-204ENST00000508930 PPP4R3CPQ6ZMV5 832 aa15.49■□□□□ 0.07
TRIM41-204ENST00000508930 PARP2Q9UGN5 583 aa15.49■□□□□ 0.07
TRIM41-204ENST00000508930 PPP1R9AQ9ULJ8 1098 aa15.49■□□□□ 0.07
TRIM41-204ENST00000508930 COL1A1P02452 1464 aaPredicted RBP15.49■□□□□ 0.07
TRIM41-204ENST00000508930 RASA1P20936 1047 aa15.49■□□□□ 0.07
TRIM41-204ENST00000508930 CALCOCO2Q13137 446 aa15.49■□□□□ 0.07
TRIM41-204ENST00000508930 COL23A1Q86Y22 540 aaPredicted RBP15.49■□□□□ 0.07
TRIM41-204ENST00000508930 ATXN2LQ8WWM7 1075 aaKnown RBP15.49■□□□□ 0.07
TRIM41-204ENST00000508930 RFFLQ8WZ73 363 aa15.49■□□□□ 0.07
TRIM41-204ENST00000508930 PAIP2Q9BPZ3 127 aaKnown RBP15.49■□□□□ 0.07
TRIM41-204ENST00000508930 EBF2Q9HAK2 575 aa15.49■□□□□ 0.07
TRIM41-204ENST00000508930 CTTNBP2NLQ9P2B4 639 aa15.49■□□□□ 0.07
TRIM41-204ENST00000508930 MYH3P11055 1940 aa15.49■□□□□ 0.07
TRIM41-204ENST00000508930 ARHGAP44Q17R89 818 aa15.49■□□□□ 0.07
TRIM41-204ENST00000508930 MAB21L3Q8N8X9 362 aa15.49■□□□□ 0.07
TRIM41-204ENST00000508930 HIP1RO75146 1068 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 LMNB1P20700 586 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 NCALDP61601 193 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 RPS8P62241 208 aaKnown RBP15.48■□□□□ 0.07
TRIM41-204ENST00000508930 SEL1L2Q5TEA6 688 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 GBP7Q8N8V2 638 aaPredicted RBP15.48■□□□□ 0.07
TRIM41-204ENST00000508930 SNX3O60493 162 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 NUDT17P0C025 328 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 PLCG2P16885 1265 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 PCK1P35558 622 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 DHX34Q14147 1143 aaKnown RBP15.48■□□□□ 0.07
TRIM41-204ENST00000508930 AP1ARQ63HQ0 302 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 DUPD1Q68J44 220 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 BARGINQ6ZT62 677 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 FRMD5Q7Z6J6 570 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 SPICE1Q8N0Z3 855 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 CCDC24Q8N4L8 307 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 UBL4BQ8N7F7 174 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 RBM46Q8TBY0 533 aaKnown RBP15.48■□□□□ 0.07
TRIM41-204ENST00000508930 ATP8B4Q8TF62 1192 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 MTFR1LQ9H019 292 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 KLHL14Q9P2G3 628 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 KIF3CO14782 793 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 RTN2O75298 545 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 CAMTA2O94983 1202 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 ACSL3O95573 720 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 LDHCP07864 332 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 CDK8P49336 464 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 COPS2P61201 443 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 PABPC4Q13310 644 aaKnown RBP eCLIP15.48■□□□□ 0.072e-8■■■□□ 15.5
TRIM41-204ENST00000508930 LLGL1Q15334 1064 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 EDRF1Q3B7T1 1238 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 C3orf67Q6ZVT6 689 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 LRRC47Q8N1G4 583 aaKnown RBP15.48■□□□□ 0.07
TRIM41-204ENST00000508930 ACSBG1Q96GR2 724 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 HES6Q96HZ4 224 aa15.48■□□□□ 0.07
TRIM41-204ENST00000508930 TBCAO75347 108 aaKnown RBP15.47■□□□□ 0.07
TRIM41-204ENST00000508930 GCNT3O95395 438 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms