RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 MIPEPQ99797 713 aa4.5□□□□□ -1.69
HMGN1P11-201ENST00000508668 DUSP23Q9BVJ7 150 aa4.5□□□□□ -1.69
HMGN1P11-201ENST00000508668 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGN1P11-201ENST00000508668 ASCC2Q9H1I8 757 aaPredicted RBP4.5□□□□□ -1.69
HMGN1P11-201ENST00000508668 GPR108Q9NPR9 543 aa4.5□□□□□ -1.69
HMGN1P11-201ENST00000508668 SERPINB13Q9UIV8 391 aa4.5□□□□□ -1.69
HMGN1P11-201ENST00000508668 FPGT-TNNI3KV9GXZ4 949 aa4.5□□□□□ -1.69
HMGN1P11-201ENST00000508668 ADGRA2Q96PE1 1338 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 A0A1W2PPC1 479 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 CHURC1-FNTBB4DL54 471 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 KBTBD13C9JR72 458 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 CST3P01034 146 aaPredicted RBP4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 APPP05067 770 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 SLC3A2P08195 630 aaKnown RBP4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 TRIM27P14373 513 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 ITGB7P26010 798 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 NASPP49321 788 aaPredicted RBP4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 YARSP54577 528 aaKnown RBP4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 HERVK_113P62684 666 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 ATP8B2P98198 1209 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 MTX1Q13505 466 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 TREML2Q5T2D2 321 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 SLC9C2Q5TAH2 1124 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 OGFOD3Q6PK18 319 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 PHACTR4Q8IZ21 702 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 REXO1Q8N1G1 1221 aaKnown RBP4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 TMEM57Q8N5G2 664 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 MFSD2AQ8NA29 543 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 MIGA1Q8NAN2 632 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 ARRDC4Q8NCT1 418 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 RASGRP4Q8TDF6 673 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 EDC3Q96F86 508 aaKnown RBP4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 PAWRQ96IZ0 340 aaKnown RBP4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 SPATA32Q96LK8 384 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 TINF2Q9BSI4 451 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 CCDC8Q9H0W5 538 aaPredicted RBP4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 EHMT1Q9H9B1 1298 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 LRRC4CQ9HCJ2 640 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 MCM9Q9NXL9 1143 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 HOXC10Q9NYD6 342 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 PALD1Q9ULE6 856 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 ZBTB21Q9ULJ3 1066 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 DDX19BQ9UMR2 479 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 PPT2Q9UMR5 302 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 GABRQQ9UN88 632 aa4.49□□□□□ -1.69
HMGN1P11-201ENST00000508668 FLT1P17948 1338 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 RAB11FIP3O75154 756 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 SLITRK5O94991 958 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 ATE1O95260 518 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 TGFB1P01137 390 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 GH2P01242 217 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 DNAJA1P31689 397 aaKnown RBP4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 COPB2P35606 906 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 MCAMP43121 646 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 CYP27A1Q02318 531 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 IKQ13123 557 aaPredicted RBP4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 KCTD2Q14681 263 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 COG2Q14746 738 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 CYP27C1Q4G0S4 372 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 ARSHQ5FYA8 562 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 OVOS1Q6IE37 1185 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 LETMD1Q6P1Q0 360 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 CCDC174Q6PII3 467 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 ZDHHC13Q8IUH4 622 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 KIF1BPQ96EK5 621 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 ZNF512BQ96KM6 892 aaPredicted RBP4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 P2RX7Q99572 595 aaKnown RBP4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 APBA2Q99767 749 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 NACAP1Q9BZK3 213 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 ANTXR1Q9H6X2 564 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 MKNK2Q9HBH9 465 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 SPC25Q9HBM1 224 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 DDX4Q9NQI0 724 aaKnown RBP4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 PRDM5Q9NQX1 630 aaPredicted RBP4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 GMIPQ9P107 970 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 SWAP70Q9UH65 585 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 TPX2Q9ULW0 747 aaKnown RBP4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 RABGAP1Q9Y3P9 1069 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 ATRNL1Q5VV63 1379 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 A0A1B0GUL6 1792 aa4.48□□□□□ -1.69
HMGN1P11-201ENST00000508668 OTOFQ9HC10 1997 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 DOCK2Q92608 1830 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 MYH2Q9UKX2 1941 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 PNMA6EA0A0J9YXQ4 647 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 SLC15A5A6NIM6 579 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 SLC22A31A6NKX4 558 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 GOLIM4O00461 696 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 CYP26A1O43174 497 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 STRNO43815 780 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 FLOT1O75955 427 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 FCER1AP12319 257 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 RAG1P15918 1043 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 HOXA7P31268 230 aaPredicted RBP4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 SOX9P48436 509 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 RHBDL3P58872 404 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 COL9A2Q14055 689 aaPredicted RBP4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 NAALADL2Q58DX5 795 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 TMEM179Q6ZVK1 233 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 NOL8Q76FK4 1167 aaKnown RBP4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 GPR142Q7Z601 462 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms