RNA–Protein interactions for RNA: ENST00000506573.1

DDR1-258, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-258ENST00000506573 SAFBQ15424 915 aaKnown RBP eCLIP17.47■□□□□ 0.39
DDR1-258ENST00000506573 NPY5RQ15761 445 aa17.47■□□□□ 0.39
DDR1-258ENST00000506573 NAALADL2Q58DX5 795 aa17.47■□□□□ 0.39
DDR1-258ENST00000506573 SLC24A5Q71RS6 500 aa17.47■□□□□ 0.39
DDR1-258ENST00000506573 SLFN12Q8IYM2 578 aa17.47■□□□□ 0.39
DDR1-258ENST00000506573 UHRF1Q96T88 793 aaPredicted RBP17.47■□□□□ 0.39
DDR1-258ENST00000506573 OSMRQ99650 979 aa17.47■□□□□ 0.39
DDR1-258ENST00000506573 ADAM2Q99965 735 aa17.47■□□□□ 0.39
DDR1-258ENST00000506573 ERVK-5Q9HDB9 667 aa17.47■□□□□ 0.39
DDR1-258ENST00000506573 AAASQ9NRG9 546 aa17.47■□□□□ 0.39
DDR1-258ENST00000506573 NOC2LQ9Y3T9 749 aaKnown RBP17.47■□□□□ 0.39
DDR1-258ENST00000506573 PRRC2BQ5JSZ5 2229 aaKnown RBP17.46■□□□□ 0.39
DDR1-258ENST00000506573 DDX11L8A8MPP1 907 aa17.46■□□□□ 0.39
DDR1-258ENST00000506573 HOXA2O43364 376 aa17.46■□□□□ 0.39
DDR1-258ENST00000506573 ZNF862O60290 1169 aa17.46■□□□□ 0.39
DDR1-258ENST00000506573 CLCN3P51790 818 aa17.46■□□□□ 0.39
DDR1-258ENST00000506573 NLRP11P59045 1033 aaKnown RBP17.46■□□□□ 0.39
DDR1-258ENST00000506573 ME3Q16798 604 aa17.46■□□□□ 0.39
DDR1-258ENST00000506573 NECAB1Q8N987 351 aa17.46■□□□□ 0.39
DDR1-258ENST00000506573 BANK1Q8NDB2 785 aa17.46■□□□□ 0.39
DDR1-258ENST00000506573 NLRP7Q8WX94 980 aa17.46■□□□□ 0.39
DDR1-258ENST00000506573 CLP1Q92989 425 aaKnown RBP17.46■□□□□ 0.39
DDR1-258ENST00000506573 PPP2R3CQ969Q6 453 aa17.46■□□□□ 0.39
DDR1-258ENST00000506573 ZNF689Q96CS4 500 aaPredicted RBP17.46■□□□□ 0.39
DDR1-258ENST00000506573 PPP1R16BQ96T49 567 aa17.46■□□□□ 0.39
DDR1-258ENST00000506573 NIFKQ9BYG3 293 aaKnown RBP17.46■□□□□ 0.39
DDR1-258ENST00000506573 RGS18Q9NS28 235 aa17.46■□□□□ 0.39
DDR1-258ENST00000506573 PPME1Q9Y570 386 aa17.46■□□□□ 0.39
DDR1-258ENST00000506573 SIP14410 1827 aa17.45■□□□□ 0.38
DDR1-258ENST00000506573 EDIL3O43854 480 aa17.45■□□□□ 0.38
DDR1-258ENST00000506573 GPR32O75388 356 aa17.45■□□□□ 0.38
DDR1-258ENST00000506573 CTDNEP1O95476 244 aa17.45■□□□□ 0.38
DDR1-258ENST00000506573 IBSPP21815 317 aaPredicted RBP17.45■□□□□ 0.38
DDR1-258ENST00000506573 EIF4BP23588 611 aaKnown RBP17.45■□□□□ 0.38
DDR1-258ENST00000506573 QARSP47897 775 aaKnown RBP17.45■□□□□ 0.38
DDR1-258ENST00000506573 TFF2Q03403 129 aa17.45■□□□□ 0.38
DDR1-258ENST00000506573 PPP2R5CQ13362 524 aa17.45■□□□□ 0.38
DDR1-258ENST00000506573 MTERF2Q49AM1 385 aa17.45■□□□□ 0.38
DDR1-258ENST00000506573 SPOUT1Q5T280 376 aaKnown RBP17.45■□□□□ 0.38
DDR1-258ENST00000506573 LRRC71Q8N4P6 559 aa17.45■□□□□ 0.38
DDR1-258ENST00000506573 LINC01599Q8WXQ3 324 aa17.45■□□□□ 0.38
DDR1-258ENST00000506573 INO80BQ9C086 356 aaPredicted RBP17.45■□□□□ 0.38
DDR1-258ENST00000506573 NSUN3Q9H649 340 aaKnown RBP17.45■□□□□ 0.38
DDR1-258ENST00000506573 ATP6V0A4Q9HBG4 840 aa17.45■□□□□ 0.38
DDR1-258ENST00000506573 LIMCH1Q9UPQ0 1083 aa17.45■□□□□ 0.38
DDR1-258ENST00000506573 MYH9P35579 1960 aaKnown RBP17.44■□□□□ 0.38
DDR1-258ENST00000506573 SLC37A4O43826 429 aa17.44■□□□□ 0.38
DDR1-258ENST00000506573 P4HBP07237 508 aaKnown RBP17.44■□□□□ 0.38
DDR1-258ENST00000506573 UGCGQ16739 394 aa17.44■□□□□ 0.38
DDR1-258ENST00000506573 OTUD6AQ7L8S5 288 aa17.44■□□□□ 0.38
DDR1-258ENST00000506573 RTN4RL1Q86UN2 441 aaPredicted RBP17.44■□□□□ 0.38
DDR1-258ENST00000506573 SLC7A3Q8WY07 619 aa17.44■□□□□ 0.38
DDR1-258ENST00000506573 P2RX5Q93086 422 aa17.44■□□□□ 0.38
DDR1-258ENST00000506573 GJA10Q969M2 543 aa17.44■□□□□ 0.38
DDR1-258ENST00000506573 GCOM2Q9BZD3 368 aaPredicted RBP17.44■□□□□ 0.38
DDR1-258ENST00000506573 TMX1Q9H3N1 280 aa17.44■□□□□ 0.38
DDR1-258ENST00000506573 CDHR5Q9HBB8 845 aa17.44■□□□□ 0.38
DDR1-258ENST00000506573 RC3H2Q9HBD1 1191 aaKnown RBP17.44■□□□□ 0.38
DDR1-258ENST00000506573 KCNMB3Q9NPA1 279 aa17.44■□□□□ 0.38
DDR1-258ENST00000506573 PCDHB12Q9Y5F1 795 aa17.44■□□□□ 0.38
DDR1-258ENST00000506573 XIRP2A4UGR9 3374 aa17.44■□□□□ 0.38
DDR1-258ENST00000506573 REV3LO60673 3130 aa17.43■□□□□ 0.38
DDR1-258ENST00000506573 TTC28Q96AY4 2481 aa17.43■□□□□ 0.38
DDR1-258ENST00000506573 COL4A4P53420 1690 aaPredicted RBP17.43■□□□□ 0.38
DDR1-258ENST00000506573 CSPP1Q1MSJ5 1256 aa17.43■□□□□ 0.38
DDR1-258ENST00000506573 PUS10Q3MIT2 529 aaKnown RBP17.43■□□□□ 0.38
DDR1-258ENST00000506573 PAN2Q504Q3 1202 aaKnown RBP17.43■□□□□ 0.38
DDR1-258ENST00000506573 B3GNT9Q6UX72 402 aa17.43■□□□□ 0.38
DDR1-258ENST00000506573 FAM228AQ86W67 206 aa17.43■□□□□ 0.38
DDR1-258ENST00000506573 ABI1Q8IZP0 508 aa17.43■□□□□ 0.38
DDR1-258ENST00000506573 NSUN7Q8NE18 718 aaKnown RBP17.43■□□□□ 0.38
DDR1-258ENST00000506573 OXER1Q8TDS5 423 aa17.43■□□□□ 0.38
DDR1-258ENST00000506573 TMEM40Q8WWA1 233 aa17.43■□□□□ 0.38
DDR1-258ENST00000506573 ZSCAN31Q96LW9 406 aaPredicted RBP17.43■□□□□ 0.38
DDR1-258ENST00000506573 ELAC1Q9H777 363 aaKnown RBP17.43■□□□□ 0.38
DDR1-258ENST00000506573 UBE2ZQ9H832 354 aaPredicted RBP17.43■□□□□ 0.38
DDR1-258ENST00000506573 TMEM161AQ9NX61 479 aa17.43■□□□□ 0.38
DDR1-258ENST00000506573 DACT1Q9NYF0 836 aa17.43■□□□□ 0.38
DDR1-258ENST00000506573 FAM50BQ9Y247 325 aa17.43■□□□□ 0.38
DDR1-258ENST00000506573 MMP1P03956 469 aa17.42■□□□□ 0.38
DDR1-258ENST00000506573 BMP1P13497 986 aa17.42■□□□□ 0.38
DDR1-258ENST00000506573 SFPQP23246 707 aaKnown RBP eCLIP17.42■□□□□ 0.38
DDR1-258ENST00000506573 GPC3P51654 580 aa17.42■□□□□ 0.38
DDR1-258ENST00000506573 EPHA7Q15375 998 aa17.42■□□□□ 0.38
DDR1-258ENST00000506573 TARBP2Q15633 366 aaKnown RBP17.42■□□□□ 0.38
DDR1-258ENST00000506573 ZNF410Q86VK4 478 aa17.42■□□□□ 0.38
DDR1-258ENST00000506573 LINC01465Q8N7H1 131 aa17.42■□□□□ 0.38
DDR1-258ENST00000506573 LLPHQ9BRT6 129 aaKnown RBP17.42■□□□□ 0.38
DDR1-258ENST00000506573 ADAMTS10Q9H324 1103 aa17.42■□□□□ 0.38
DDR1-258ENST00000506573 UPF2Q9HAU5 1272 aaKnown RBP17.42■□□□□ 0.38
DDR1-258ENST00000506573 GJB4Q9NTQ9 266 aa17.42■□□□□ 0.38
DDR1-258ENST00000506573 MRPL42Q9Y6G3 142 aaKnown RBP17.42■□□□□ 0.38
DDR1-258ENST00000506573 TTC3P53804 2025 aa17.42■□□□□ 0.38
DDR1-258ENST00000506573 TBKBP1A7MCY6 615 aa17.41■□□□□ 0.38
DDR1-258ENST00000506573 C9IYK1 514 aa17.41■□□□□ 0.38
DDR1-258ENST00000506573 GAS2O43903 313 aaKnown RBP17.41■□□□□ 0.38
DDR1-258ENST00000506573 MAFO75444 373 aaPredicted RBP17.41■□□□□ 0.38
DDR1-258ENST00000506573 SKIP12755 728 aa17.41■□□□□ 0.38
DDR1-258ENST00000506573 FDPSP14324 419 aaKnown RBP17.41■□□□□ 0.38
DDR1-258ENST00000506573 DARSP14868 501 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms