RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 TMEM59LQ9UK28 342 aa4.25□□□□□ -1.73
ALYREF-201ENST00000504015 DBR1Q9UK59 544 aaKnown RBP4.25□□□□□ -1.73
ALYREF-201ENST00000504015 FEM1BQ9UK73 627 aa4.25□□□□□ -1.73
ALYREF-201ENST00000504015 TTC7AQ9ULT0 858 aaPredicted RBP4.25□□□□□ -1.73
ALYREF-201ENST00000504015 NENFQ9UMX5 172 aa4.25□□□□□ -1.73
ALYREF-201ENST00000504015 TFR2Q9UP52 801 aa4.25□□□□□ -1.73
ALYREF-201ENST00000504015 USP20Q9Y2K6 914 aa4.25□□□□□ -1.73
ALYREF-201ENST00000504015 FRMD4BQ9Y2L6 1034 aa4.25□□□□□ -1.73
ALYREF-201ENST00000504015 FAN1Q9Y2M0 1017 aa4.25□□□□□ -1.73
ALYREF-201ENST00000504015 ASTN1O14525 1302 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 PFASO15067 1338 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 ZC3H4Q9UPT8 1303 aaKnown RBP4.24□□□□□ -1.73
ALYREF-201ENST00000504015 SCN9AQ15858 1988 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 NPHP3-ACAD11A0A0J9YXS1 232 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 A0A1W2PRG0 241 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 ARHGEF35A5YM69 484 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 GOLGA6CA6NDK9 693 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 ERICH4A6NGS2 130 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 SPDYE2BA6NHP3 402 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 MIF4GDA9UHW6 222 aaKnown RBP4.24□□□□□ -1.73
ALYREF-201ENST00000504015 BHMG1C9JSJ3 638 aaPredicted RBP4.24□□□□□ -1.73
ALYREF-201ENST00000504015 AGPSO00116 658 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 PGRMC1O00264 195 aaKnown RBP4.24□□□□□ -1.73
ALYREF-201ENST00000504015 TULP2O00295 520 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 NKRFO15226 690 aaKnown RBP eCLIP4.24□□□□□ -1.73
ALYREF-201ENST00000504015 MAFGO15525 162 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 BUB1O43683 1085 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 RAD21O60216 631 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 ZEB2O60315 1214 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 DKC1O60832 514 aaKnown RBP eCLIP4.24□□□□□ -1.73
ALYREF-201ENST00000504015 GAS7O60861 476 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 PPFIA4O75335 1185 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 PALMO75781 387 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 PPP1R37O75864 691 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 AKAP3O75969 853 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 KIF4AO95239 1232 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 APBA3O96018 575 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 P4HBP07237 508 aaKnown RBP4.24□□□□□ -1.73
ALYREF-201ENST00000504015 ASNSP08243 561 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 TMEM253P0C7T8 217 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 GOLGA6DP0CG33 693 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 SPDYE6P0CI01 402 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 MYBP10242 640 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 KRT13P13646 458 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 HSPA6P17066 643 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 SLC9A1P19634 815 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 SFNP31947 248 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 GBP1P32455 592 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 SOX5P35711 763 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 GGCXP38435 758 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 CAP2P40123 477 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 STAT3P40763 770 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 FMO5P49326 533 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 HSD17B4P51659 736 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 CASP5P51878 434 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 PSMC6P62333 389 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 SKOR1P84550 965 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 SLC20A2Q08357 652 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 RASA3Q14644 834 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 KIF22Q14807 665 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 DLGAP5Q15398 846 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 USH1GQ495M9 461 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 CFAP58Q5T655 872 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 NFRKBQ6P4R8 1299 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 ALKBH5Q6P6C2 394 aaKnown RBP4.24□□□□□ -1.73
ALYREF-201ENST00000504015 RSBN1LQ6PCB5 846 aaPredicted RBP4.24□□□□□ -1.73
ALYREF-201ENST00000504015 LRIG3Q6UXM1 1119 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 INTS8Q75QN2 995 aaKnown RBP4.24□□□□□ -1.73
ALYREF-201ENST00000504015 SND1Q7KZF4 910 aaKnown RBP eCLIP4.24□□□□□ -1.73
ALYREF-201ENST00000504015 ZNF571Q7Z3V5 609 aaPredicted RBP4.24□□□□□ -1.73
ALYREF-201ENST00000504015 CROCCP2Q86T23 111 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 USP37Q86T82 979 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 SPATS2Q86XZ4 545 aaKnown RBP4.24□□□□□ -1.73
ALYREF-201ENST00000504015 RHOT2Q8IXI1 618 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 EFCAB13Q8IY85 973 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 MYCT1Q8N699 235 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 ARFGAP2Q8N6H7 521 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 FAM133AQ8N9E0 248 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 LRRC57Q8N9N7 239 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 PRPF38AQ8NAV1 312 aaKnown RBP4.24□□□□□ -1.73
ALYREF-201ENST00000504015 AGBL3Q8NEM8 1001 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 RDM1Q8NG50 284 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 TPCN2Q8NHX9 752 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 CCDC26Q8TAB7 109 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 SLC30A5Q8TAD4 765 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 LPAR1Q92633 364 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 LRRC45Q96CN5 670 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 PRMT6Q96LA8 375 aaPredicted RBP4.24□□□□□ -1.73
ALYREF-201ENST00000504015 FAM81BQ96LP2 452 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 GMLQ99445 158 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 P2RX7Q99572 595 aaKnown RBP4.24□□□□□ -1.73
ALYREF-201ENST00000504015 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.24□□□□□ -1.732e-9■■■■■ 32.7
ALYREF-201ENST00000504015 MXRA8Q9BRK3 442 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 ZNF577Q9BSK1 485 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 RUSC1Q9BVN2 902 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 FGFBP2Q9BYJ0 223 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 ISCUQ9H1K1 167 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 TAF1DQ9H5J8 278 aaPredicted RBP4.24□□□□□ -1.73
ALYREF-201ENST00000504015 SUGCTQ9HAC7 445 aa4.24□□□□□ -1.73
ALYREF-201ENST00000504015 SIX2Q9NPC8 291 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms