RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 DEPDC1Q5TB30 811 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 KLHDC7AQ5VTJ3 777 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 SNX30Q5VWJ9 437 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 IL23RQ5VWK5 629 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 MFSD5Q6N075 450 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 PHLDB3Q6NSJ2 640 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 PACS1Q6VY07 963 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 NANOGNBQ7Z5D8 188 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 TMC3Q7Z5M5 1100 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 ADGRG6Q86SQ4 1221 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 SPATA24Q86W54 205 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 CCNJLQ8IV13 435 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 GPIHBP1Q8IV16 184 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 MIGA1Q8NAN2 632 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 USP38Q8NB14 1042 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 ZNF280CQ8ND82 737 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 ANKK1Q8NFD2 765 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 FNDC8Q8TC99 324 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 ACTRT1Q8TDG2 376 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 USP33Q8TEY7 942 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 UCMAQ8WVF2 138 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 SCG3Q8WXD2 468 aaKnown RBP6.44□□□□□ -1.38
LINC01340-201ENST00000504012 CTNNBL1Q8WYA6 563 aaPredicted RBP6.44□□□□□ -1.38
LINC01340-201ENST00000504012 CCDC42Q96M95 316 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 CEP63Q96MT8 703 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 INPP4AQ96PE3 977 aaPredicted RBP6.44□□□□□ -1.38
LINC01340-201ENST00000504012 ERGIC2Q96RQ1 377 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 RTFDC1Q9BY42 306 aaPredicted RBP6.44□□□□□ -1.38
LINC01340-201ENST00000504012 TAOK3Q9H2K8 898 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 ETNK1Q9HBU6 452 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 CABP2Q9NPB3 220 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 RHBDL2Q9NX52 303 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 ZDHHC7Q9NXF8 308 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 PLK2Q9NYY3 685 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 FBXO2Q9UK22 296 aaPredicted RBP6.44□□□□□ -1.38
LINC01340-201ENST00000504012 FBXL5Q9UKA1 691 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 PLAGL2Q9UPG8 496 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 CARD8Q9Y2G2 431 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 STK38LQ9Y2H1 464 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 ATP6V0A2Q9Y487 856 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 PCDHB2Q9Y5E7 798 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 NUMBLQ9Y6R0 609 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 KAT6BQ8WYB5 2073 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 ATP8B3O60423 1300 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 PCDH11XQ9BZA7 1347 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 STK36Q9NRP7 1315 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 DIP2AQ14689 1571 aa6.44□□□□□ -1.38
LINC01340-201ENST00000504012 EDC4Q6P2E9 1401 aaKnown RBP6.43□□□□□ -1.38
LINC01340-201ENST00000504012 SSU72P8A0A1W2PR75 194 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 SH3PXD2BA1X283 911 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 A8MUI8 341 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 A8MXQ7 604 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 F8W8V4 182 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 EIF3FO00303 357 aaPredicted RBP6.43□□□□□ -1.38
LINC01340-201ENST00000504012 MAPK13O15264 365 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 POLR2DO15514 142 aaKnown RBP6.43□□□□□ -1.38
LINC01340-201ENST00000504012 HOXA2O43364 376 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 AKR1B10O60218 316 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 DCTN3O75935 186 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 CYP1A1P04798 512 aaPredicted RBP6.43□□□□□ -1.38
LINC01340-201ENST00000504012 PTPN4P29074 926 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 ATP5DP30049 168 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 PPP1R2P41236 205 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 HALP42357 657 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 TXKP42681 527 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 MATR3P43243 847 aaKnown RBP eCLIP6.43□□□□□ -1.38
LINC01340-201ENST00000504012 EMP3P54852 163 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 RTP1P59025 263 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 ERVK-9P63128 1117 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 GUCY1B3Q02153 619 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 PAK1Q13153 545 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 CAMK2BQ13554 666 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 ITGA7Q13683 1181 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 TTLL12Q14166 644 aaPredicted RBP6.43□□□□□ -1.38
LINC01340-201ENST00000504012 KIF22Q14807 665 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 RCN1Q15293 331 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 SAFBQ15424 915 aaKnown RBP eCLIP6.43□□□□□ -1.38
LINC01340-201ENST00000504012 TRIM71Q2Q1W2 868 aaKnown RBP6.43□□□□□ -1.38
LINC01340-201ENST00000504012 P3H1Q32P28 736 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 CCDC14Q49A88 953 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 ZCWPW2Q504Y3 356 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 ZNF394Q53GI3 561 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 EFCAB2Q5VUJ9 269 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 DUS1LQ6P1R4 473 aaKnown RBP6.43□□□□□ -1.38
LINC01340-201ENST00000504012 DHRS4L2Q6PKH6 230 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 LRRC74BQ6ZQY2 392 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 STOX1Q6ZVD7 989 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 TMTC3Q6ZXV5 915 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 PHLDB2Q86SQ0 1253 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 ZNF589Q86UQ0 364 aaPredicted RBP6.43□□□□□ -1.38
LINC01340-201ENST00000504012 AACSQ86V21 672 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 SFR1Q86XK3 245 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 DDX42Q86XP3 938 aaKnown RBP eCLIP6.43□□□□□ -1.38
LINC01340-201ENST00000504012 VPS37DQ86XT2 251 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 FITM2Q8N6M3 262 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 ALLCQ8N6M5 410 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 ZNF398Q8TD17 642 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 PLEKHO2Q8TD55 490 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 CKAP2Q8WWK9 683 aa6.43□□□□□ -1.38
LINC01340-201ENST00000504012 WASF1Q92558 559 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms