RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 COL19A1Q14993 1142 aa13.48□□□□□ -0.25
MED28-203ENST00000503945 TMEM266Q2M3C6 531 aa13.48□□□□□ -0.25
MED28-203ENST00000503945 TIGD5Q53EQ6 642 aa13.48□□□□□ -0.25
MED28-203ENST00000503945 MIER3Q7Z3K6 550 aa13.48□□□□□ -0.25
MED28-203ENST00000503945 DAGLBQ8NCG7 672 aa13.48□□□□□ -0.25
MED28-203ENST00000503945 RDM1Q8NG50 284 aa13.48□□□□□ -0.25
MED28-203ENST00000503945 ZNF689Q96CS4 500 aaPredicted RBP13.48□□□□□ -0.25
MED28-203ENST00000503945 PABPC5Q96DU9 382 aaKnown RBP13.48□□□□□ -0.25
MED28-203ENST00000503945 AIFM3Q96NN9 605 aa13.48□□□□□ -0.25
MED28-203ENST00000503945 NSUN3Q9H649 340 aaKnown RBP13.48□□□□□ -0.25
MED28-203ENST00000503945 ST3GAL5Q9UNP4 418 aa13.48□□□□□ -0.25
MED28-203ENST00000503945 KCNJ14Q9UNX9 436 aa13.48□□□□□ -0.25
MED28-203ENST00000503945 NOC2LQ9Y3T9 749 aaKnown RBP13.48□□□□□ -0.25
MED28-203ENST00000503945 LOXHD1Q8IVV2 1947 aa13.48□□□□□ -0.25
MED28-203ENST00000503945 TTC3P53804 2025 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 MARCH6O60337 910 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 PSMD10O75832 226 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 C22orf31O95567 290 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 OATP04181 439 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 LINC00271P0C7V0 271 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 CTNNB1P35222 781 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 LTBRP36941 435 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 NLRP11P59045 1033 aaKnown RBP13.47□□□□□ -0.25
MED28-203ENST00000503945 CDC42EP1Q00587 391 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 INF2Q27J81 1249 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 KIZQ2M2Z5 673 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 LETM2Q2VYF4 491 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 MOXD1Q6UVY6 613 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 SLC24A5Q71RS6 500 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 NPAS4Q8IUM7 802 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 GJA10Q969M2 543 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 MAP7D2Q96T17 732 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 ADAM2Q99965 735 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 C11orf84Q9BUA3 381 aaPredicted RBP13.47□□□□□ -0.25
MED28-203ENST00000503945 PHF20Q9BVI0 1012 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 PLVAPQ9BX97 442 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 TMX1Q9H3N1 280 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 UNC45AQ9H3U1 944 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 C1orf112Q9NSG2 853 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 CLDND1Q9NY35 253 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 ORC3Q9UBD5 711 aaPredicted RBP13.47□□□□□ -0.25
MED28-203ENST00000503945 DDX25Q9UHL0 483 aaKnown RBP13.47□□□□□ -0.25
MED28-203ENST00000503945 AKT3Q9Y243 479 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 MUC6Q6W4X9 2439 aa13.47□□□□□ -0.25
MED28-203ENST00000503945 C5orf67F2Z3F1 127 aa13.46□□□□□ -0.25
MED28-203ENST00000503945 GRM6O15303 877 aa13.46□□□□□ -0.25
MED28-203ENST00000503945 NCK2O43639 380 aa13.46□□□□□ -0.25
MED28-203ENST00000503945 GPR32O75388 356 aa13.46□□□□□ -0.25
MED28-203ENST00000503945 TDP2O95551 362 aa13.46□□□□□ -0.25
MED28-203ENST00000503945 VTNP04004 478 aa13.46□□□□□ -0.25
MED28-203ENST00000503945 ZSCAN20P17040 1043 aaPredicted RBP13.46□□□□□ -0.25
MED28-203ENST00000503945 IBSPP21815 317 aaPredicted RBP13.46□□□□□ -0.25
MED28-203ENST00000503945 SARSP49591 514 aaKnown RBP13.46□□□□□ -0.25
MED28-203ENST00000503945 DNM2P50570 870 aa13.46□□□□□ -0.25
MED28-203ENST00000503945 NEK4P51957 841 aa13.46□□□□□ -0.25
MED28-203ENST00000503945 AK2P54819 239 aa13.46□□□□□ -0.25
MED28-203ENST00000503945 TBC1D8BQ0IIM8 1120 aa13.46□□□□□ -0.25
MED28-203ENST00000503945 ALYREFQ86V81 257 aaKnown RBP13.46□□□□□ -0.25
MED28-203ENST00000503945 CMTR2Q8IYT2 770 aaKnown RBP13.46□□□□□ -0.25
MED28-203ENST00000503945 CRIPAKQ8N1N5 446 aa13.46□□□□□ -0.25
MED28-203ENST00000503945 CLP1Q92989 425 aaKnown RBP13.46□□□□□ -0.25
MED28-203ENST00000503945 FAM20AQ96MK3 541 aa13.46□□□□□ -0.25
MED28-203ENST00000503945 PPP1R16BQ96T49 567 aa13.46□□□□□ -0.25
MED28-203ENST00000503945 OSMRQ99650 979 aa13.46□□□□□ -0.25
MED28-203ENST00000503945 NAP1L4Q99733 375 aaKnown RBP13.46□□□□□ -0.25
MED28-203ENST00000503945 NIFKQ9BYG3 293 aaKnown RBP13.46□□□□□ -0.25
MED28-203ENST00000503945 ERVK-5Q9HDB9 667 aa13.46□□□□□ -0.25
MED28-203ENST00000503945 RGS18Q9NS28 235 aa13.46□□□□□ -0.25
MED28-203ENST00000503945 ADGRA3Q8IWK6 1321 aa13.45□□□□□ -0.26
MED28-203ENST00000503945 COL4A6Q14031 1691 aa13.45□□□□□ -0.26
MED28-203ENST00000503945 C19orf67A6NJJ6 358 aa13.45□□□□□ -0.26
MED28-203ENST00000503945 DDX11L8A8MPP1 907 aa13.45□□□□□ -0.26
MED28-203ENST00000503945 ZNF862O60290 1169 aa13.45□□□□□ -0.26
MED28-203ENST00000503945 EIF4BP23588 611 aaKnown RBP13.45□□□□□ -0.26
MED28-203ENST00000503945 PRKCEQ02156 737 aa13.45□□□□□ -0.26
MED28-203ENST00000503945 ZP2Q05996 745 aa13.45□□□□□ -0.26
MED28-203ENST00000503945 DLX2Q07687 328 aaPredicted RBP13.45□□□□□ -0.26
MED28-203ENST00000503945 HYAL1Q12794 435 aa13.45□□□□□ -0.26
MED28-203ENST00000503945 NPY5RQ15761 445 aa13.45□□□□□ -0.26
MED28-203ENST00000503945 CTC1Q2NKJ3 1217 aa13.45□□□□□ -0.26
MED28-203ENST00000503945 NAALADL2Q58DX5 795 aa13.45□□□□□ -0.26
MED28-203ENST00000503945 XKR3Q5GH77 459 aa13.45□□□□□ -0.26
MED28-203ENST00000503945 PPP4R3AQ6IN85 833 aa13.45□□□□□ -0.26
MED28-203ENST00000503945 NEK8Q86SG6 692 aa13.45□□□□□ -0.26
MED28-203ENST00000503945 LINC01599Q8WXQ3 324 aa13.45□□□□□ -0.26
MED28-203ENST00000503945 MBOAT7Q96N66 472 aa13.45□□□□□ -0.26
MED28-203ENST00000503945 LMAN2LQ9H0V9 348 aa13.45□□□□□ -0.26
MED28-203ENST00000503945 STK36Q9NRP7 1315 aa13.44□□□□□ -0.26
MED28-203ENST00000503945 DCXO43602 365 aa13.44□□□□□ -0.26
MED28-203ENST00000503945 CCNT1O60563 726 aaKnown RBP13.44□□□□□ -0.26
MED28-203ENST00000503945 DKC1O60832 514 aaKnown RBP eCLIP13.44□□□□□ -0.26
MED28-203ENST00000503945 BAG4O95429 457 aaKnown RBP13.44□□□□□ -0.26
MED28-203ENST00000503945 GCFC2P16383 781 aaKnown RBP13.44□□□□□ -0.26
MED28-203ENST00000503945 GTF2F1P35269 517 aaKnown RBP eCLIP13.44□□□□□ -0.26
MED28-203ENST00000503945 CLCN3P51790 818 aa13.44□□□□□ -0.26
MED28-203ENST00000503945 PSMC5P62195 406 aa13.44□□□□□ -0.26
MED28-203ENST00000503945 FAM189BP81408 668 aa13.44□□□□□ -0.26
MED28-203ENST00000503945 CLUL1Q15846 466 aa13.44□□□□□ -0.26
MED28-203ENST00000503945 PIK3AP1Q6ZUJ8 805 aa13.44□□□□□ -0.26
MED28-203ENST00000503945 ADHFE1Q8IWW8 467 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms