RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 RRP36Q96EU6 259 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-210ENST00000503827 CASD1Q96PB1 797 aa18.1■□□□□ 0.49
PDLIM7-210ENST00000503827 JADE2Q9NQC1 790 aa18.1■□□□□ 0.49
PDLIM7-210ENST00000503827 EP300Q09472 2414 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-210ENST00000503827 SLC26A2P50443 739 aa18.09■□□□□ 0.49
PDLIM7-210ENST00000503827 WTAPQ15007 396 aa18.09■□□□□ 0.49
PDLIM7-210ENST00000503827 HINFPQ9BQA5 517 aa18.09■□□□□ 0.49
PDLIM7-210ENST00000503827 SEC63Q9UGP8 760 aaKnown RBP18.09■□□□□ 0.49
PDLIM7-210ENST00000503827 HIP1O00291 1037 aa18.08■□□□□ 0.48
PDLIM7-210ENST00000503827 STK25O00506 426 aa18.08■□□□□ 0.48
PDLIM7-210ENST00000503827 KRT37O76014 449 aa18.08■□□□□ 0.48
PDLIM7-210ENST00000503827 CXCL14O95715 111 aa18.08■□□□□ 0.48
PDLIM7-210ENST00000503827 CRYBB1P53674 252 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-210ENST00000503827 ACTR2P61160 394 aa18.08■□□□□ 0.48
PDLIM7-210ENST00000503827 CATIPQ7Z7H3 387 aa18.08■□□□□ 0.48
PDLIM7-210ENST00000503827 KIAA0319LQ8IZA0 1049 aa18.08■□□□□ 0.48
PDLIM7-210ENST00000503827 SIX5Q8N196 739 aa18.08■□□□□ 0.48
PDLIM7-210ENST00000503827 SLC39A11Q8N1S5 342 aa18.08■□□□□ 0.48
PDLIM7-210ENST00000503827 SDF4Q9BRK5 362 aa18.08■□□□□ 0.48
PDLIM7-210ENST00000503827 PSTPIP2Q9H939 334 aa18.08■□□□□ 0.48
PDLIM7-210ENST00000503827 DUSP12Q9UNI6 340 aa18.08■□□□□ 0.48
PDLIM7-210ENST00000503827 DMXL1Q9Y485 3027 aa18.07■□□□□ 0.48
PDLIM7-210ENST00000503827 SPDYE3A6NKU9 549 aa18.07■□□□□ 0.48
PDLIM7-210ENST00000503827 HBP1O60381 514 aa18.07■□□□□ 0.48
PDLIM7-210ENST00000503827 DSC3Q14574 896 aa18.07■□□□□ 0.48
PDLIM7-210ENST00000503827 SART3Q15020 963 aaKnown RBP18.07■□□□□ 0.48
PDLIM7-210ENST00000503827 KANK3Q6NY19 840 aa18.07■□□□□ 0.48
PDLIM7-210ENST00000503827 OTOP3Q7RTS5 596 aa18.07■□□□□ 0.48
PDLIM7-210ENST00000503827 FAM228AQ86W67 206 aa18.07■□□□□ 0.48
PDLIM7-210ENST00000503827 CYP2W1Q8TAV3 490 aa18.07■□□□□ 0.48
PDLIM7-210ENST00000503827 OSMRQ99650 979 aa18.07■□□□□ 0.48
PDLIM7-210ENST00000503827 SPZ1Q9BXG8 430 aa18.07■□□□□ 0.48
PDLIM7-210ENST00000503827 SENP2Q9HC62 589 aa18.07■□□□□ 0.48
PDLIM7-210ENST00000503827 R4GN57 208 aa18.07■□□□□ 0.48
PDLIM7-210ENST00000503827 FANCMQ8IYD8 2048 aa18.06■□□□□ 0.48
PDLIM7-210ENST00000503827 COL1A2P08123 1366 aa18.06■□□□□ 0.48
PDLIM7-210ENST00000503827 NFASCO94856 1347 aa18.06■□□□□ 0.48
PDLIM7-210ENST00000503827 ARP10275 920 aa18.06■□□□□ 0.48
PDLIM7-210ENST00000503827 RFX1P22670 979 aa18.06■□□□□ 0.48
PDLIM7-210ENST00000503827 KIZQ2M2Z5 673 aa18.06■□□□□ 0.48
PDLIM7-210ENST00000503827 CCDC149Q6ZUS6 474 aa18.06■□□□□ 0.48
PDLIM7-210ENST00000503827 CNTNAP3BQ96NU0 1288 aa18.06■□□□□ 0.48
PDLIM7-210ENST00000503827 PPP1R16BQ96T49 567 aa18.06■□□□□ 0.48
PDLIM7-210ENST00000503827 CNTNAP3Q9BZ76 1288 aa18.06■□□□□ 0.48
PDLIM7-210ENST00000503827 KCNH7Q9NS40 1196 aa18.06■□□□□ 0.48
PDLIM7-210ENST00000503827 RNF19AQ9NV58 838 aa18.06■□□□□ 0.48
PDLIM7-210ENST00000503827 C2orf16Q68DN1 1984 aa18.06■□□□□ 0.48
PDLIM7-210ENST00000503827 MYH9P35579 1960 aaKnown RBP18.05■□□□□ 0.48
PDLIM7-210ENST00000503827 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.05■□□□□ 0.48
PDLIM7-210ENST00000503827 ZSCAN20P17040 1043 aaPredicted RBP18.05■□□□□ 0.48
PDLIM7-210ENST00000503827 ALDH7A1P49419 539 aaKnown RBP18.05■□□□□ 0.48
PDLIM7-210ENST00000503827 GIT2Q14161 759 aa18.05■□□□□ 0.48
PDLIM7-210ENST00000503827 ZC3H14Q6PJT7 736 aaKnown RBP18.05■□□□□ 0.48
PDLIM7-210ENST00000503827 TMC5Q6UXY8 1006 aa18.05■□□□□ 0.48
PDLIM7-210ENST00000503827 CABP7Q86V35 215 aa18.05■□□□□ 0.48
PDLIM7-210ENST00000503827 CTCFLQ8NI51 663 aaPredicted RBP18.05■□□□□ 0.48
PDLIM7-210ENST00000503827 RUBCNQ92622 972 aa18.05■□□□□ 0.48
PDLIM7-210ENST00000503827 TMEM169Q96HH4 297 aa18.05■□□□□ 0.48
PDLIM7-210ENST00000503827 LNPKQ9C0E8 428 aa18.05■□□□□ 0.48
PDLIM7-210ENST00000503827 KCNK12Q9HB15 430 aa18.05■□□□□ 0.48
PDLIM7-210ENST00000503827 DLL3Q9NYJ7 618 aa18.05■□□□□ 0.48
PDLIM7-210ENST00000503827 PCDHA6Q9UN73 950 aa18.05■□□□□ 0.48
PDLIM7-210ENST00000503827 PCDHA8Q9Y5H6 950 aa18.05■□□□□ 0.48
PDLIM7-210ENST00000503827 WDR87Q6ZQQ6 2873 aa18.05■□□□□ 0.48
PDLIM7-210ENST00000503827 SPDYE4A6NLX3 237 aa18.04■□□□□ 0.48
PDLIM7-210ENST00000503827 ATG7O95352 703 aa18.04■□□□□ 0.48
PDLIM7-210ENST00000503827 EPCAMP16422 314 aa18.04■□□□□ 0.48
PDLIM7-210ENST00000503827 SMARCA1P28370 1054 aa18.04■□□□□ 0.48
PDLIM7-210ENST00000503827 METAP2P50579 478 aaKnown RBP eCLIP18.04■□□□□ 0.48
PDLIM7-210ENST00000503827 UBE2SQ16763 222 aa18.04■□□□□ 0.48
PDLIM7-210ENST00000503827 ZNF484Q5JVG2 852 aa18.04■□□□□ 0.48
PDLIM7-210ENST00000503827 FAM160B1Q5W0V3 765 aa18.04■□□□□ 0.48
PDLIM7-210ENST00000503827 ECHDC2Q86YB7 292 aa18.04■□□□□ 0.48
PDLIM7-210ENST00000503827 VPS52Q8N1B4 723 aa18.04■□□□□ 0.48
PDLIM7-210ENST00000503827 RNF169Q8NCN4 708 aa18.04■□□□□ 0.48
PDLIM7-210ENST00000503827 MAP3K14Q99558 947 aa18.04■□□□□ 0.48
PDLIM7-210ENST00000503827 MXRA8Q9BRK3 442 aa18.04■□□□□ 0.48
PDLIM7-210ENST00000503827 IGSF9Q9P2J2 1179 aa18.04■□□□□ 0.48
PDLIM7-210ENST00000503827 NT5C1B-RDH14C9J2C7 533 aa18.03■□□□□ 0.48
PDLIM7-210ENST00000503827 BACH1O14867 736 aa18.03■□□□□ 0.48
PDLIM7-210ENST00000503827 KIF5BP33176 963 aa18.03■□□□□ 0.48
PDLIM7-210ENST00000503827 RALYLQ86SE5 291 aaKnown RBP18.03■□□□□ 0.48
PDLIM7-210ENST00000503827 GPR149Q86SP6 731 aa18.03■□□□□ 0.48
PDLIM7-210ENST00000503827 SLC22A17Q8WUG5 538 aa18.03■□□□□ 0.48
PDLIM7-210ENST00000503827 RIN2Q8WYP3 895 aaPredicted RBP18.03■□□□□ 0.48
PDLIM7-210ENST00000503827 MRPL9Q9BYD2 267 aaKnown RBP18.03■□□□□ 0.48
PDLIM7-210ENST00000503827 ZBP1Q9H171 429 aa18.03■□□□□ 0.48
PDLIM7-210ENST00000503827 SFXN1Q9H9B4 322 aa18.03■□□□□ 0.48
PDLIM7-210ENST00000503827 WNT16Q9UBV4 365 aa18.03■□□□□ 0.48
PDLIM7-210ENST00000503827 IRAK3Q9Y616 596 aa18.03■□□□□ 0.48
PDLIM7-210ENST00000503827 IGKV6D-21A0A0A0MT36 114 aa18.02■□□□□ 0.48
PDLIM7-210ENST00000503827 VTNP04004 478 aa18.02■□□□□ 0.48
PDLIM7-210ENST00000503827 BCAR1P56945 870 aa18.02■□□□□ 0.48
PDLIM7-210ENST00000503827 HDAC1Q13547 482 aaPredicted RBP18.02■□□□□ 0.48
PDLIM7-210ENST00000503827 CLLU1OSQ5K130 101 aa18.02■□□□□ 0.48
PDLIM7-210ENST00000503827 PPFIBP1Q86W92 1011 aa18.02■□□□□ 0.48
PDLIM7-210ENST00000503827 LZTS2Q9BRK4 669 aa18.02■□□□□ 0.48
PDLIM7-210ENST00000503827 GPR32O75388 356 aa18.01■□□□□ 0.47
PDLIM7-210ENST00000503827 CFHP08603 1231 aa18.01■□□□□ 0.47
PDLIM7-210ENST00000503827 CTSAP10619 480 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms