RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-222ENST00000498801 NTF4P34130 210 aa8.65□□□□□ -1.02
GARNL3-222ENST00000498801 CTCFP49711 727 aaPredicted RBP8.65□□□□□ -1.02
GARNL3-222ENST00000498801 TRDNQ13061 729 aa8.65□□□□□ -1.02
GARNL3-222ENST00000498801 KRT32Q14532 448 aa8.65□□□□□ -1.02
GARNL3-222ENST00000498801 CCL15Q16663 113 aa8.65□□□□□ -1.02
GARNL3-222ENST00000498801 SHROOM1Q2M3G4 852 aaPredicted RBP8.65□□□□□ -1.02
GARNL3-222ENST00000498801 CCDC144BQ3MJ40 725 aa8.65□□□□□ -1.02
GARNL3-222ENST00000498801 RRP12Q5JTH9 1297 aaKnown RBP8.65□□□□□ -1.02
GARNL3-222ENST00000498801 TMEM201Q5SNT2 666 aa8.65□□□□□ -1.02
GARNL3-222ENST00000498801 GPAT2Q6NUI2 795 aa8.65□□□□□ -1.02
GARNL3-222ENST00000498801 FDX2Q6P4F2 183 aa8.65□□□□□ -1.02
GARNL3-222ENST00000498801 STOX1Q6ZVD7 989 aa8.65□□□□□ -1.02
GARNL3-222ENST00000498801 FASTKD5Q7L8L6 764 aaKnown RBP8.65□□□□□ -1.02
GARNL3-222ENST00000498801 ZNF444Q8N0Y2 327 aaPredicted RBP8.65□□□□□ -1.02
GARNL3-222ENST00000498801 FAM43AQ8N2R8 423 aa8.65□□□□□ -1.02
GARNL3-222ENST00000498801 TMEM130Q8N3G9 435 aa8.65□□□□□ -1.02
GARNL3-222ENST00000498801 TMEM40Q8WWA1 233 aa8.65□□□□□ -1.02
GARNL3-222ENST00000498801 KRT23Q9C075 422 aa8.65□□□□□ -1.02
GARNL3-222ENST00000498801 OSBPL2Q9H1P3 480 aa8.65□□□□□ -1.02
GARNL3-222ENST00000498801 CNNM2Q9H8M5 875 aa8.65□□□□□ -1.02
GARNL3-222ENST00000498801 PRDM10Q9NQV6 1147 aa8.65□□□□□ -1.02
GARNL3-222ENST00000498801 DISC1Q9NRI5 854 aa8.65□□□□□ -1.02
GARNL3-222ENST00000498801 RNF186Q9NXI6 227 aa8.65□□□□□ -1.02
GARNL3-222ENST00000498801 AGTPBP1Q9UPW5 1226 aa8.65□□□□□ -1.02
GARNL3-222ENST00000498801 PHIPQ8WWQ0 1821 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 TSPY2A6NKD2 308 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 B4E1Z4 1266 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 BTBD19C9JJ37 291 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 MPHOSPH10O00566 681 aaKnown RBP8.64□□□□□ -1.03
GARNL3-222ENST00000498801 FANCGO15287 622 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 FOXN1O15353 648 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 RANBP6O60518 1105 aaKnown RBP8.64□□□□□ -1.03
GARNL3-222ENST00000498801 DNAJA2O60884 412 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 TSPY3P0CV98 308 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 TSPY8P0CW00 308 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 DRD2P14416 443 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 AKR1B1P15121 316 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 COL8A1P27658 744 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 HOXA7P31268 230 aaPredicted RBP8.64□□□□□ -1.03
GARNL3-222ENST00000498801 ANAPC15P60006 121 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 ETF1P62495 437 aaKnown RBP8.64□□□□□ -1.03
GARNL3-222ENST00000498801 TFAP4Q01664 338 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 ICA1Q05084 483 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 SOX4Q06945 474 aaPredicted RBP8.64□□□□□ -1.03
GARNL3-222ENST00000498801 SERINC3Q13530 473 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 FAM47AQ5JRC9 791 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 ANKRD34AQ69YU3 496 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 OTUD7BQ6GQQ9 843 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 OVOS1Q6IE37 1185 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 LBX2Q6XYB7 198 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 RALYLQ86SE5 291 aaKnown RBP8.64□□□□□ -1.03
GARNL3-222ENST00000498801 SIAH1Q8IUQ4 282 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 RNF214Q8ND24 703 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 NCOA7Q8NI08 942 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 LPAR1Q92633 364 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 ESR2Q92731 530 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 C22orf23Q9BZE7 217 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 ATXN3LQ9H3M9 355 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 SH2D4AQ9H788 454 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 KANSL2Q9H9L4 492 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 CABP5Q9NP86 173 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 GMIPQ9P107 970 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.64□□□□□ -1.03
GARNL3-222ENST00000498801 ADAM30Q9UKF2 790 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 TMX2Q9Y320 296 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 ATAD5Q96QE3 1844 aa8.64□□□□□ -1.03
GARNL3-222ENST00000498801 MYPNQ86TC9 1320 aa8.63□□□□□ -1.03
GARNL3-222ENST00000498801 TRIM75PA6NK02 468 aa8.63□□□□□ -1.03
GARNL3-222ENST00000498801 USP14P54578 494 aa8.63□□□□□ -1.03
GARNL3-222ENST00000498801 SPP2Q13103 211 aa8.63□□□□□ -1.03
GARNL3-222ENST00000498801 RAB33AQ14088 237 aa8.63□□□□□ -1.03
GARNL3-222ENST00000498801 TTLL4Q14679 1199 aa8.63□□□□□ -1.03
GARNL3-222ENST00000498801 ADCK5Q3MIX3 580 aa8.63□□□□□ -1.03
GARNL3-222ENST00000498801 CYB5R4Q7L1T6 521 aa8.63□□□□□ -1.03
GARNL3-222ENST00000498801 MB21D2Q8IYB1 491 aaPredicted RBP8.63□□□□□ -1.03
GARNL3-222ENST00000498801 C12orf50Q8NA57 414 aaPredicted RBP8.63□□□□□ -1.03
GARNL3-222ENST00000498801 MKL1Q969V6 931 aa8.63□□□□□ -1.03
GARNL3-222ENST00000498801 LENG1Q96BZ8 264 aaPredicted RBP8.63□□□□□ -1.03
GARNL3-222ENST00000498801 ACSF2Q96CM8 615 aaPredicted RBP8.63□□□□□ -1.03
GARNL3-222ENST00000498801 IL17RAQ96F46 866 aa8.63□□□□□ -1.03
GARNL3-222ENST00000498801 JAKMIP1Q96N16 626 aaKnown RBP8.63□□□□□ -1.03
GARNL3-222ENST00000498801 TBC1D32Q96NH3 1257 aa8.63□□□□□ -1.03
GARNL3-222ENST00000498801 NEK1Q96PY6 1258 aa8.63□□□□□ -1.03
GARNL3-222ENST00000498801 PARK7Q99497 189 aaKnown RBP8.63□□□□□ -1.03
GARNL3-222ENST00000498801 TRIM55Q9BYV6 548 aa8.63□□□□□ -1.03
GARNL3-222ENST00000498801 GSX1Q9H4S2 264 aaPredicted RBP8.63□□□□□ -1.03
GARNL3-222ENST00000498801 TCP11L1Q9NUJ3 509 aa8.63□□□□□ -1.03
GARNL3-222ENST00000498801 MTMR4Q9NYA4 1195 aa8.63□□□□□ -1.03
GARNL3-222ENST00000498801 ZSWIM5Q9P217 1185 aa8.63□□□□□ -1.03
GARNL3-222ENST00000498801 NYAP2Q9P242 653 aa8.63□□□□□ -1.03
GARNL3-222ENST00000498801 HTTP42858 3142 aa8.63□□□□□ -1.03
GARNL3-222ENST00000498801 A0A1W2PRG0 241 aa8.62□□□□□ -1.03
GARNL3-222ENST00000498801 TLR2O60603 784 aa8.62□□□□□ -1.03
GARNL3-222ENST00000498801 ALX3O95076 343 aa8.62□□□□□ -1.03
GARNL3-222ENST00000498801 HMGB1P09429 215 aaKnown RBP8.62□□□□□ -1.03
GARNL3-222ENST00000498801 VCAM1P19320 739 aa8.62□□□□□ -1.03
GARNL3-222ENST00000498801 PSMA5P28066 241 aa8.62□□□□□ -1.03
GARNL3-222ENST00000498801 MCM5P33992 734 aa8.62□□□□□ -1.03
GARNL3-222ENST00000498801 INSM1Q01101 510 aaPredicted RBP8.62□□□□□ -1.03
GARNL3-222ENST00000498801 GRM1Q13255 1194 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms