RNA–Protein interactions for RNA: ENST00000498474.2

PUDP-205, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 4

Gene PUDP, Length 1,040 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-205ENST00000498474 NECTIN1Q15223 517 aa9.17□□□□□ -0.94
PUDP-205ENST00000498474 PTGISQ16647 500 aa9.17□□□□□ -0.94
PUDP-205ENST00000498474 TCTN1Q2MV58 587 aa9.17□□□□□ -0.94
PUDP-205ENST00000498474 HSDL1Q3SXM5 330 aa9.17□□□□□ -0.94
PUDP-205ENST00000498474 NFRKBQ6P4R8 1299 aa9.17□□□□□ -0.94
PUDP-205ENST00000498474 TMCO2Q7Z6W1 182 aaPredicted RBP9.17□□□□□ -0.94
PUDP-205ENST00000498474 VSIG10LQ86VR7 867 aa9.17□□□□□ -0.94
PUDP-205ENST00000498474 NLRP8Q86W28 1048 aa9.17□□□□□ -0.94
PUDP-205ENST00000498474 DHX37Q8IY37 1157 aaKnown RBP9.17□□□□□ -0.94
PUDP-205ENST00000498474 C1orf216Q8TAB5 229 aa9.17□□□□□ -0.94
PUDP-205ENST00000498474 DHX38Q92620 1227 aaKnown RBP9.17□□□□□ -0.94
PUDP-205ENST00000498474 WNT8BQ93098 351 aa9.17□□□□□ -0.94
PUDP-205ENST00000498474 BTBD6Q96KE9 485 aa9.17□□□□□ -0.94
PUDP-205ENST00000498474 PRDM6Q9NQX0 595 aa9.17□□□□□ -0.94
PUDP-205ENST00000498474 HDAC6Q9UBN7 1215 aa9.17□□□□□ -0.94
PUDP-205ENST00000498474 KLF15Q9UIH9 416 aa9.17□□□□□ -0.94
PUDP-205ENST00000498474 KAT6AQ92794 2004 aa9.17□□□□□ -0.94
PUDP-205ENST00000498474 CCDC69A6NI79 296 aa9.16□□□□□ -0.94
PUDP-205ENST00000498474 RFXAPO00287 272 aa9.16□□□□□ -0.94
PUDP-205ENST00000498474 KPNA6O60684 536 aa9.16□□□□□ -0.94
PUDP-205ENST00000498474 IQCF3P0C7M6 154 aa9.16□□□□□ -0.94
PUDP-205ENST00000498474 SUPT20HL2P0C7V6 817 aa9.16□□□□□ -0.94
PUDP-205ENST00000498474 EPXP11678 715 aa9.16□□□□□ -0.94
PUDP-205ENST00000498474 CPA1P15085 419 aa9.16□□□□□ -0.94
PUDP-205ENST00000498474 CASTP20810 708 aaKnown RBP9.16□□□□□ -0.94
PUDP-205ENST00000498474 UBA1P22314 1058 aaKnown RBP9.16□□□□□ -0.94
PUDP-205ENST00000498474 CCND2P30279 289 aa9.16□□□□□ -0.94
PUDP-205ENST00000498474 MCM5P33992 734 aa9.16□□□□□ -0.94
PUDP-205ENST00000498474 SP4Q02446 784 aa9.16□□□□□ -0.94
PUDP-205ENST00000498474 GHRHRQ02643 423 aa9.16□□□□□ -0.94
PUDP-205ENST00000498474 GPNMBQ14956 572 aa9.16□□□□□ -0.94
PUDP-205ENST00000498474 CCDC85BQ15834 202 aaPredicted RBP9.16□□□□□ -0.94
PUDP-205ENST00000498474 DGKDQ16760 1214 aa9.16□□□□□ -0.94
PUDP-205ENST00000498474 UBE2SQ16763 222 aa9.16□□□□□ -0.94
PUDP-205ENST00000498474 KIAA0753Q2KHM9 967 aa9.16□□□□□ -0.94
PUDP-205ENST00000498474 ADCK5Q3MIX3 580 aa9.16□□□□□ -0.94
PUDP-205ENST00000498474 CELF3Q5SZQ8 465 aaKnown RBP9.16□□□□□ -0.94
PUDP-205ENST00000498474 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.16□□□□□ -0.94
PUDP-205ENST00000498474 RPUSD2Q8IZ73 545 aaKnown RBP9.16□□□□□ -0.94
PUDP-205ENST00000498474 DEPDC4Q8N2C3 294 aa9.16□□□□□ -0.94
PUDP-205ENST00000498474 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.16□□□□□ -0.94
PUDP-205ENST00000498474 CTCFLQ8NI51 663 aaPredicted RBP9.16□□□□□ -0.94
PUDP-205ENST00000498474 SPATA33Q96N06 139 aa9.16□□□□□ -0.94
PUDP-205ENST00000498474 FTOQ9C0B1 505 aaKnown RBP eCLIP9.16□□□□□ -0.94
PUDP-205ENST00000498474 CERS4Q9HA82 394 aa9.16□□□□□ -0.94
PUDP-205ENST00000498474 NOD1Q9Y239 953 aa9.16□□□□□ -0.94
PUDP-205ENST00000498474 SLC4A7Q9Y6M7 1214 aa9.16□□□□□ -0.94
PUDP-205ENST00000498474 MEIS2O14770 477 aa9.15□□□□□ -0.94
PUDP-205ENST00000498474 KHNYNO15037 678 aaKnown RBP9.15□□□□□ -0.94
PUDP-205ENST00000498474 ARAFP10398 606 aa9.15□□□□□ -0.94
PUDP-205ENST00000498474 TXLNAP40222 546 aa9.15□□□□□ -0.94
PUDP-205ENST00000498474 LAMC2Q13753 1193 aa9.15□□□□□ -0.94
PUDP-205ENST00000498474 NCOA4Q13772 614 aa9.15□□□□□ -0.94
PUDP-205ENST00000498474 ADGRE1Q14246 886 aa9.15□□□□□ -0.94
PUDP-205ENST00000498474 EML3Q32P44 896 aa9.15□□□□□ -0.94
PUDP-205ENST00000498474 CENPQQ7L2Z9 268 aaPredicted RBP9.15□□□□□ -0.94
PUDP-205ENST00000498474 CYFIP1Q7L576 1253 aa9.15□□□□□ -0.94
PUDP-205ENST00000498474 SPRED2Q7Z698 418 aa9.15□□□□□ -0.94
PUDP-205ENST00000498474 MICU3Q86XE3 530 aa9.15□□□□□ -0.94
PUDP-205ENST00000498474 RETREG2Q8NC44 543 aa9.15□□□□□ -0.94
PUDP-205ENST00000498474 PPTC7Q8NI37 304 aa9.15□□□□□ -0.94
PUDP-205ENST00000498474 RRP36Q96EU6 259 aaKnown RBP9.15□□□□□ -0.94
PUDP-205ENST00000498474 PGBD1Q96JS3 809 aa9.15□□□□□ -0.94
PUDP-205ENST00000498474 SPZ1Q9BXG8 430 aa9.15□□□□□ -0.94
PUDP-205ENST00000498474 SEZ6LQ9BYH1 1024 aa9.15□□□□□ -0.94
PUDP-205ENST00000498474 OSBPL7Q9BZF2 842 aa9.15□□□□□ -0.94
PUDP-205ENST00000498474 MSRAQ9UJ68 235 aa9.15□□□□□ -0.94
PUDP-205ENST00000498474 PRRC2BQ5JSZ5 2229 aaKnown RBP9.15□□□□□ -0.95
PUDP-205ENST00000498474 TCF20Q9UGU0 1960 aaKnown RBP9.14□□□□□ -0.95
PUDP-205ENST00000498474 HAS3O00219 553 aa9.14□□□□□ -0.95
PUDP-205ENST00000498474 DDAH1O94760 285 aa9.14□□□□□ -0.95
PUDP-205ENST00000498474 F2P00734 622 aa9.14□□□□□ -0.95
PUDP-205ENST00000498474 CKBP12277 381 aa9.14□□□□□ -0.95
PUDP-205ENST00000498474 ATP2A2P16615 1042 aaKnown RBP9.14□□□□□ -0.95
PUDP-205ENST00000498474 IGFBP4P22692 258 aa9.14□□□□□ -0.95
PUDP-205ENST00000498474 PTPN11Q06124 597 aaPredicted RBP9.14□□□□□ -0.95
PUDP-205ENST00000498474 BMP2KLQ5H9B9 411 aa9.14□□□□□ -0.95
PUDP-205ENST00000498474 UTP14CQ5TAP6 766 aaKnown RBP9.14□□□□□ -0.95
PUDP-205ENST00000498474 TRIM50Q86XT4 487 aa9.14□□□□□ -0.95
PUDP-205ENST00000498474 C7orf31Q8N865 590 aa9.14□□□□□ -0.95
PUDP-205ENST00000498474 SMARCC2Q8TAQ2 1214 aa9.14□□□□□ -0.95
PUDP-205ENST00000498474 ZDHHC1Q8WTX9 485 aa9.14□□□□□ -0.95
PUDP-205ENST00000498474 TMEM87BQ96K49 555 aa9.14□□□□□ -0.95
PUDP-205ENST00000498474 C16orf70Q9BSU1 422 aa9.14□□□□□ -0.95
PUDP-205ENST00000498474 MAF1Q9H063 256 aa9.14□□□□□ -0.95
PUDP-205ENST00000498474 MLXIPQ9HAP2 919 aa9.14□□□□□ -0.95
PUDP-205ENST00000498474 ZNF358Q9NW07 568 aa9.14□□□□□ -0.95
PUDP-205ENST00000498474 GTF2IRD1Q9UHL9 959 aa9.14□□□□□ -0.95
PUDP-205ENST00000498474 BRPF3Q9ULD4 1205 aa9.14□□□□□ -0.95
PUDP-205ENST00000498474 TMEM265A0A087WTH1 108 aa9.13□□□□□ -0.95
PUDP-205ENST00000498474 EPOPA6NHQ4 379 aa9.13□□□□□ -0.95
PUDP-205ENST00000498474 NBNO60934 754 aa9.13□□□□□ -0.95
PUDP-205ENST00000498474 ADAM23O75077 832 aa9.13□□□□□ -0.95
PUDP-205ENST00000498474 ATP9AO75110 1047 aa9.13□□□□□ -0.95
PUDP-205ENST00000498474 LGALS2P05162 132 aa9.13□□□□□ -0.95
PUDP-205ENST00000498474 CA3P07451 260 aa9.13□□□□□ -0.95
PUDP-205ENST00000498474 KIF5BP33176 963 aa9.13□□□□□ -0.95
PUDP-205ENST00000498474 LIFRP42702 1097 aa9.13□□□□□ -0.95
PUDP-205ENST00000498474 DEFB103AP81534 67 aa9.13□□□□□ -0.95
PUDP-205ENST00000498474 BFSP2Q13515 415 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms