RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 RIPOR2Q9Y4F9 1068 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 KIF1AQ12756 1690 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 SDK1Q7Z5N4 2213 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 GRID2IPA4D2P6 1211 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 IDSB3KWA1 339 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 CCER2I3L3R5 266 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 OIP5O43482 229 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 DIAPH1O60610 1272 aaKnown RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 DKC1O60832 514 aaKnown RBP eCLIP1.62□□□□□ -2.15
XRN1-214ENST00000498077 P4HBP07237 508 aaKnown RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 ZNF865P0CJ78 1059 aaPredicted RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 SRGAP2CP0DJJ0 459 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 POLR2EP19388 210 aaKnown RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 IDSP22304 550 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 HINT1P49773 126 aaPredicted RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 GUCA2AQ02747 115 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 KRT17Q04695 432 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 POU4F2Q12837 409 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 IKZF1Q13422 519 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 SKIDA1Q1XH10 827 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 IGSF11Q5DX21 431 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 SIRPB2Q5JXA9 342 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 TYW3Q6IPR3 259 aaKnown RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 ACAD10Q6JQN1 1059 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 TRILQ7L0X0 811 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 AHI1Q8N157 1196 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 RBM15BQ8NDT2 890 aaKnown RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 MOSPD2Q8NHP6 518 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 STK32AQ8WU08 396 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 CNKSR1Q969H4 720 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 MS4A14Q96JA4 679 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 ZKSCAN3Q9BRR0 538 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 MAGEH1Q9H213 219 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 LRRC19Q9H756 370 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 NTN4Q9HB63 628 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 ARL8BQ9NVJ2 186 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 DNAAF2Q9NVR5 837 aaKnown RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 LRWD1Q9UFC0 647 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 GNEQ9Y223 722 aaKnown RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 RTCBQ9Y3I0 505 aaKnown RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 CCDC9Q9Y3X0 531 aaKnown RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 SNX9Q9Y5X1 595 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 RAD54BQ9Y620 910 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 IGSF1Q8N6C5 1336 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 LNP1A1A4G5 178 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 SH2D7A6NKC9 451 aaPredicted RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 MYO1CO00159 1063 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 MEIS2O14770 477 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 MAFGO15525 162 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 RGS5O15539 181 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 MMP20O60882 483 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 RGS9O75916 674 aaPredicted RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 ZRANB2O95218 330 aaKnown RBP eCLIP1.62□□□□□ -2.15
XRN1-214ENST00000498077 FCER1AP12319 257 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 ITGB6P18564 788 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 NCF2P19878 526 aaPredicted RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 THPOP40225 353 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 PLA2G4AP47712 749 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 RGS7P49802 495 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 PAPOLAP51003 745 aaKnown RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 VAMP7P51809 220 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 PRKAG1P54619 331 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 AOX1Q06278 1338 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 NFIAQ12857 509 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 BFSP2Q13515 415 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 CSRP2Q16527 193 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 ECM1Q16610 540 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 WSCD2Q2TBF2 565 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 SPATA31A5Q5VU36 1347 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 BRAPQ7Z569 592 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 SPATA31A7Q8IWB4 1347 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 NALCNQ8IZF0 1738 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 POMGNT2Q8NAT1 580 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 STKLD1Q8NE28 680 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 PALLDQ8WX93 1383 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 SMG7Q92540 1137 aaKnown RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 GLMNQ92990 594 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 FCRL3Q96P31 734 aaPredicted RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 FCRL5Q96RD9 977 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 LSM14BQ9BX40 385 aaKnown RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 ELL3Q9HB65 397 aaPredicted RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 BEX1Q9HBH7 125 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 PALMDQ9NP74 551 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 TRPV5Q9NQA5 729 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 KBTBD4Q9NVX7 518 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 SIRT5Q9NXA8 310 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 CXXC1Q9P0U4 656 aaPredicted RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 EIF3KQ9UBQ5 218 aaKnown RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 SLC25A13Q9UJS0 675 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 DDX41Q9UJV9 622 aaKnown RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 BRPF3Q9ULD4 1205 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 INPP5FQ9Y2H2 1132 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 R3HDM2Q9Y2K5 976 aaKnown RBP1.62□□□□□ -2.15
XRN1-214ENST00000498077 PCDHGB2Q9Y5G2 931 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 NBASA2RRP1 2371 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 ADGRB1O14514 1584 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 IGKV6D-21A0A0A0MT36 114 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 LINC01565O15544 149 aa1.62□□□□□ -2.15
XRN1-214ENST00000498077 SMNDC1O75940 238 aaKnown RBP eCLIP1.62□□□□□ -2.15
XRN1-214ENST00000498077 FBXO21O94952 628 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms