RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 PLEKHH3Q7Z736 793 aa4.07□□□□□ -1.76
RIF1-212ENST00000498041 FERMT3Q86UX7 667 aa4.07□□□□□ -1.76
RIF1-212ENST00000498041 KBTBD2Q8IY47 623 aa4.07□□□□□ -1.76
RIF1-212ENST00000498041 IFNL2Q8IZJ0 200 aa4.07□□□□□ -1.76
RIF1-212ENST00000498041 USP7Q93009 1102 aa4.07□□□□□ -1.76
RIF1-212ENST00000498041 TUBGCP5Q96RT8 1024 aa4.07□□□□□ -1.76
RIF1-212ENST00000498041 CARD11Q9BXL7 1154 aa4.07□□□□□ -1.76
RIF1-212ENST00000498041 ZDHHC5Q9C0B5 715 aa4.07□□□□□ -1.76
RIF1-212ENST00000498041 KATNBL1Q9H079 304 aa4.07□□□□□ -1.76
RIF1-212ENST00000498041 SPTLC3Q9NUV7 552 aa4.07□□□□□ -1.76
RIF1-212ENST00000498041 A0A0G2JNJ9 132 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 TGM5O43548 720 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 ZEB2O60315 1214 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 B4GALT3O60512 393 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 VIL1P09327 827 aaKnown RBP4.06□□□□□ -1.76
RIF1-212ENST00000498041 BPIP17213 487 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 CSF2RBP32927 897 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 CNR2P34972 360 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 ADCY8P40145 1251 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 ETV4P43268 484 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 SMAD3P84022 425 aaKnown RBP4.06□□□□□ -1.76
RIF1-212ENST00000498041 MAP3K12Q12852 859 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 MOGSQ13724 837 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 LRRC32Q14392 662 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 USP10Q14694 798 aaKnown RBP4.06□□□□□ -1.76
RIF1-212ENST00000498041 EIF4HQ15056 248 aaKnown RBP4.06□□□□□ -1.76
RIF1-212ENST00000498041 SURF1Q15526 300 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 CT47A1Q5JQC4 288 aaPredicted RBP4.06□□□□□ -1.76
RIF1-212ENST00000498041 GPR158Q5T848 1215 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 TMEM200BQ69YZ2 307 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 GRAMD4Q6IC98 578 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 SLFN12LQ6IEE8 588 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 TIGD7Q6NT04 549 aaPredicted RBP4.06□□□□□ -1.76
RIF1-212ENST00000498041 OTOP2Q7RTS6 562 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 KRT26Q7Z3Y9 468 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 RALYLQ86SE5 291 aaKnown RBP4.06□□□□□ -1.76
RIF1-212ENST00000498041 PHYKPLQ8IUZ5 450 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 UBR7Q8N806 425 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 C7orf31Q8N865 590 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 TTC1Q99614 292 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 IFT22Q9H7X7 185 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 ZMAT4Q9H898 229 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 Q9UFV3 132 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 INVSQ9Y283 1065 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 DUSP10Q9Y6W6 482 aa4.06□□□□□ -1.76
RIF1-212ENST00000498041 ABCC9O60706 1549 aa4.05□□□□□ -1.76
RIF1-212ENST00000498041 B4GALT4O60513 344 aa4.05□□□□□ -1.76
RIF1-212ENST00000498041 HMGCRP04035 888 aa4.05□□□□□ -1.76
RIF1-212ENST00000498041 CNGA1P29973 690 aa4.05□□□□□ -1.76
RIF1-212ENST00000498041 LSP1P33241 339 aa4.05□□□□□ -1.76
RIF1-212ENST00000498041 RGS3P49796 1198 aa4.05□□□□□ -1.76
RIF1-212ENST00000498041 KCNQ1P51787 676 aa4.05□□□□□ -1.76
RIF1-212ENST00000498041 PHC1P78364 1004 aa4.05□□□□□ -1.76
RIF1-212ENST00000498041 STRN3Q13033 797 aa4.05□□□□□ -1.76
RIF1-212ENST00000498041 ATP13A4Q4VNC1 1196 aa4.05□□□□□ -1.76
RIF1-212ENST00000498041 PRAMEF9Q5VWM5 478 aa4.05□□□□□ -1.76
RIF1-212ENST00000498041 STRA8Q7Z7C7 330 aa4.05□□□□□ -1.76
RIF1-212ENST00000498041 ZNF610Q8N9Z0 462 aa4.05□□□□□ -1.76
RIF1-212ENST00000498041 RTF1Q92541 710 aaKnown RBP4.05□□□□□ -1.76
RIF1-212ENST00000498041 RPGRQ92834 1020 aaKnown RBP4.05□□□□□ -1.76
RIF1-212ENST00000498041 EMC7Q9NPA0 242 aa4.05□□□□□ -1.76
RIF1-212ENST00000498041 USP36Q9P275 1121 aaKnown RBP4.05□□□□□ -1.76
RIF1-212ENST00000498041 CDC42EP3Q9UKI2 254 aa4.05□□□□□ -1.76
RIF1-212ENST00000498041 SBNO2Q9Y2G9 1366 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 K7ESM1 405 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 NEMP1O14524 444 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 MAFGO15525 162 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 BRINP1O60477 761 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 PRPF6O94906 941 aaKnown RBP4.04□□□□□ -1.76
RIF1-212ENST00000498041 ZNF888P0CJ79 500 aaPredicted RBP4.04□□□□□ -1.76
RIF1-212ENST00000498041 CPEP16870 476 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 BCAR1P56945 870 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 PPP2CBP62714 309 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 PPP2CAP67775 309 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 ADCY2Q08462 1091 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 MYBPC3Q14896 1274 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 NOLC1Q14978 699 aaKnown RBP eCLIP4.04□□□□□ -1.76
RIF1-212ENST00000498041 TERF2Q15554 542 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 DDB1Q16531 1140 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 ZNF827Q17R98 1081 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 ZNF568Q3ZCX4 644 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 ZMAT1Q5H9K5 638 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 RNF187Q5TA31 235 aaPredicted RBP4.04□□□□□ -1.76
RIF1-212ENST00000498041 ARHGEF18Q6ZSZ5 1173 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 GPR155Q7Z3F1 870 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 AFAP1L2Q8N4X5 818 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 SLC5A5Q92911 643 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 SPC25Q9HBM1 224 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 KCMF1Q9P0J7 381 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.04□□□□□ -1.76
RIF1-212ENST00000498041 APOBEC2Q9Y235 224 aaKnown RBP4.04□□□□□ -1.76
RIF1-212ENST00000498041 SLC4A7Q9Y6M7 1214 aa4.04□□□□□ -1.76
RIF1-212ENST00000498041 ZNF536O15090 1300 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.03□□□□□ -1.76
RIF1-212ENST00000498041 LAMTOR5O43504 91 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 DNAJC6O75061 913 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 RAB11FIP3O75154 756 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 ULK1O75385 1050 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 APOL3O95236 402 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 PLATP00750 562 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms