RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 C4orf19Q8IY42 314 aa12.85□□□□□ -0.35
HLA-B-254ENST00000497377 EXOC8Q8IYI6 725 aa12.85□□□□□ -0.35
HLA-B-254ENST00000497377 USP38Q8NB14 1042 aa12.85□□□□□ -0.35
HLA-B-254ENST00000497377 BANK1Q8NDB2 785 aa12.85□□□□□ -0.35
HLA-B-254ENST00000497377 JPH2Q9BR39 696 aaPredicted RBP12.85□□□□□ -0.35
HLA-B-254ENST00000497377 ZSWIM4Q9H7M6 989 aa12.85□□□□□ -0.35
HLA-B-254ENST00000497377 SEPT9Q9UHD8 586 aaPredicted RBP12.85□□□□□ -0.35
HLA-B-254ENST00000497377 LHX6Q9UPM6 363 aa12.85□□□□□ -0.35
HLA-B-254ENST00000497377 SLC4A7Q9Y6M7 1214 aa12.85□□□□□ -0.35
HLA-B-254ENST00000497377 KDM3AQ9Y4C1 1321 aa12.85□□□□□ -0.35
HLA-B-254ENST00000497377 DDX11L8A8MPP1 907 aa12.84□□□□□ -0.35
HLA-B-254ENST00000497377 CHRNA1P02708 482 aa12.84□□□□□ -0.35
HLA-B-254ENST00000497377 CTSHP09668 335 aa12.84□□□□□ -0.35
HLA-B-254ENST00000497377 PRPHP41219 470 aa12.84□□□□□ -0.35
HLA-B-254ENST00000497377 MGAT3Q09327 533 aa12.84□□□□□ -0.35
HLA-B-254ENST00000497377 TBC1D8BQ0IIM8 1120 aa12.84□□□□□ -0.35
HLA-B-254ENST00000497377 IKBKEQ14164 716 aa12.84□□□□□ -0.35
HLA-B-254ENST00000497377 PLEKHG4Q58EX7 1191 aa12.84□□□□□ -0.35
HLA-B-254ENST00000497377 OTUD6AQ7L8S5 288 aa12.84□□□□□ -0.35
HLA-B-254ENST00000497377 TRMT1LQ7Z2T5 733 aaKnown RBP12.84□□□□□ -0.35
HLA-B-254ENST00000497377 PHOSPHO2Q8TCD6 241 aa12.84□□□□□ -0.35
HLA-B-254ENST00000497377 SEPT8Q92599 483 aa12.84□□□□□ -0.35
HLA-B-254ENST00000497377 APBB2Q92870 758 aa12.84□□□□□ -0.35
HLA-B-254ENST00000497377 EIF2AK1Q9BQI3 630 aaKnown RBP12.84□□□□□ -0.35
HLA-B-254ENST00000497377 LXNQ9BS40 222 aa12.84□□□□□ -0.35
HLA-B-254ENST00000497377 RAB34Q9BZG1 259 aa12.84□□□□□ -0.35
HLA-B-254ENST00000497377 FAM49AQ9H0Q0 323 aaPredicted RBP12.84□□□□□ -0.35
HLA-B-254ENST00000497377 TRPV2Q9Y5S1 764 aa12.84□□□□□ -0.35
HLA-B-254ENST00000497377 CDY2AQ9Y6F7 541 aa12.84□□□□□ -0.35
HLA-B-254ENST00000497377 VPS37CA5D8V6 355 aaPredicted RBP12.83□□□□□ -0.36
HLA-B-254ENST00000497377 ZBBXA8MT70 800 aa12.83□□□□□ -0.36
HLA-B-254ENST00000497377 STBD1O95210 358 aa12.83□□□□□ -0.36
HLA-B-254ENST00000497377 LYPLA2O95372 231 aa12.83□□□□□ -0.36
HLA-B-254ENST00000497377 BMP15O95972 392 aa12.83□□□□□ -0.36
HLA-B-254ENST00000497377 HSP90AA1P07900 732 aaKnown RBP12.83□□□□□ -0.36
HLA-B-254ENST00000497377 KCNJ6P48051 423 aa12.83□□□□□ -0.36
HLA-B-254ENST00000497377 FOXK1P85037 733 aa12.83□□□□□ -0.36
HLA-B-254ENST00000497377 CDC42EP1Q00587 391 aa12.83□□□□□ -0.36
HLA-B-254ENST00000497377 PTGDRQ13258 359 aa12.83□□□□□ -0.36
HLA-B-254ENST00000497377 ODR4Q5SWX8 454 aa12.83□□□□□ -0.36
HLA-B-254ENST00000497377 EFCAB12Q6NXP0 572 aa12.83□□□□□ -0.36
HLA-B-254ENST00000497377 PLPP6Q8IY26 295 aa12.83□□□□□ -0.36
HLA-B-254ENST00000497377 KIAA0319LQ8IZA0 1049 aa12.83□□□□□ -0.36
HLA-B-254ENST00000497377 METTL13Q8N6R0 699 aa12.83□□□□□ -0.36
HLA-B-254ENST00000497377 C4orf32Q8N8J7 132 aa12.83□□□□□ -0.36
HLA-B-254ENST00000497377 ERMNQ8TAM6 284 aa12.83□□□□□ -0.36
HLA-B-254ENST00000497377 RNF166Q96A37 237 aaPredicted RBP12.83□□□□□ -0.36
HLA-B-254ENST00000497377 DYDC2Q96IM9 177 aa12.83□□□□□ -0.36
HLA-B-254ENST00000497377 MAP7D2Q96T17 732 aa12.83□□□□□ -0.36
HLA-B-254ENST00000497377 SLC9A7Q96T83 725 aa12.83□□□□□ -0.36
HLA-B-254ENST00000497377 HSD17B14Q9BPX1 270 aa12.83□□□□□ -0.36
HLA-B-254ENST00000497377 CELF4Q9BZC1 486 aaKnown RBP12.83□□□□□ -0.36
HLA-B-254ENST00000497377 TUFT1Q9NNX1 390 aa12.83□□□□□ -0.36
HLA-B-254ENST00000497377 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.83□□□□□ -0.36
HLA-B-254ENST00000497377 RGL1Q9NZL6 768 aa12.83□□□□□ -0.36
HLA-B-254ENST00000497377 CXXC1Q9P0U4 656 aaPredicted RBP12.83□□□□□ -0.36
HLA-B-254ENST00000497377 PCDHB6Q9Y5E3 794 aa12.83□□□□□ -0.36
HLA-B-254ENST00000497377 TMEM265A0A087WTH1 108 aa12.82□□□□□ -0.36
HLA-B-254ENST00000497377 SOX1O00570 391 aaPredicted RBP12.82□□□□□ -0.36
HLA-B-254ENST00000497377 GAS2O43903 313 aaKnown RBP12.82□□□□□ -0.36
HLA-B-254ENST00000497377 SLITRK3O94933 977 aa12.82□□□□□ -0.36
HLA-B-254ENST00000497377 XRCC6P12956 609 aaKnown RBP eCLIP12.82□□□□□ -0.36
HLA-B-254ENST00000497377 ATP2A2P16615 1042 aaKnown RBP12.82□□□□□ -0.36
HLA-B-254ENST00000497377 SYT1P21579 422 aa12.82□□□□□ -0.36
HLA-B-254ENST00000497377 MUTP22033 750 aa12.82□□□□□ -0.36
HLA-B-254ENST00000497377 YWHABP31946 246 aaKnown RBP12.82□□□□□ -0.36
HLA-B-254ENST00000497377 RFC5P40937 340 aa12.82□□□□□ -0.36
HLA-B-254ENST00000497377 TECP42680 631 aa12.82□□□□□ -0.36
HLA-B-254ENST00000497377 DNM2P50570 870 aa12.82□□□□□ -0.36
HLA-B-254ENST00000497377 CYP4A11Q02928 519 aa12.82□□□□□ -0.36
HLA-B-254ENST00000497377 PDIA5Q14554 519 aa12.82□□□□□ -0.36
HLA-B-254ENST00000497377 NBR1Q14596 966 aa12.82□□□□□ -0.36
HLA-B-254ENST00000497377 MTERF2Q49AM1 385 aa12.82□□□□□ -0.36
HLA-B-254ENST00000497377 FBXO47Q5MNV8 452 aa12.82□□□□□ -0.36
HLA-B-254ENST00000497377 HAUS3Q68CZ6 603 aa12.82□□□□□ -0.36
HLA-B-254ENST00000497377 FAM109BQ6ICB4 259 aaPredicted RBP12.82□□□□□ -0.36
HLA-B-254ENST00000497377 TSHZ1Q6ZSZ6 1077 aa12.82□□□□□ -0.36
HLA-B-254ENST00000497377 ANO5Q75V66 913 aa12.82□□□□□ -0.36
HLA-B-254ENST00000497377 TPH2Q8IWU9 490 aa12.82□□□□□ -0.36
HLA-B-254ENST00000497377 LINC01465Q8N7H1 131 aa12.82□□□□□ -0.36
HLA-B-254ENST00000497377 DBF4BQ8NFT6 615 aa12.82□□□□□ -0.36
HLA-B-254ENST00000497377 ZBTB10Q96DT7 871 aa12.82□□□□□ -0.36
HLA-B-254ENST00000497377 IFIH1Q9BYX4 1025 aaKnown RBP12.82□□□□□ -0.36
HLA-B-254ENST00000497377 CYP26B1Q9NR63 512 aa12.82□□□□□ -0.36
HLA-B-254ENST00000497377 ANKEF1Q9NU02 776 aa12.82□□□□□ -0.36
HLA-B-254ENST00000497377 SIP14410 1827 aa12.82□□□□□ -0.36
HLA-B-254ENST00000497377 MICAL3Q7RTP6 2002 aa12.81□□□□□ -0.36
HLA-B-254ENST00000497377 MAFO75444 373 aaPredicted RBP12.81□□□□□ -0.36
HLA-B-254ENST00000497377 GHRP10912 638 aa12.81□□□□□ -0.36
HLA-B-254ENST00000497377 CRYBB1P53674 252 aaPredicted RBP12.81□□□□□ -0.36
HLA-B-254ENST00000497377 ATP2C1P98194 919 aaPredicted RBP12.81□□□□□ -0.36
HLA-B-254ENST00000497377 CTTNQ14247 550 aaKnown RBP12.81□□□□□ -0.36
HLA-B-254ENST00000497377 LPIN1Q14693 890 aa12.81□□□□□ -0.36
HLA-B-254ENST00000497377 RAB30Q15771 203 aa12.81□□□□□ -0.36
HLA-B-254ENST00000497377 ARL6IP4Q66PJ3 421 aaKnown RBP12.81□□□□□ -0.36
HLA-B-254ENST00000497377 DTHD1Q6ZMT9 781 aa12.81□□□□□ -0.36
HLA-B-254ENST00000497377 SLC7A3Q8WY07 619 aa12.81□□□□□ -0.36
HLA-B-254ENST00000497377 LRCH3Q96II8 777 aa12.81□□□□□ -0.36
HLA-B-254ENST00000497377 CEP170P1Q96L14 293 aa12.81□□□□□ -0.36
HLA-B-254ENST00000497377 CEP89Q96ST8 783 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms