RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 PCDHA10Q9Y5I2 948 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 UBE4BO95155 1302 aa11.33□□□□□ -0.6
HDAC3-214ENST00000495485 LRRC37A2A6NM11 1700 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 A0A1W2PQC6 194 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 RBM47A0AV96 593 aaKnown RBP11.32□□□□□ -0.6
HDAC3-214ENST00000495485 SOWAHBA6NEL2 793 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 AKR1B15C9JRZ8 316 aaPredicted RBP11.32□□□□□ -0.6
HDAC3-214ENST00000495485 PES1O00541 588 aaKnown RBP11.32□□□□□ -0.6
HDAC3-214ENST00000495485 EIF3DO15371 548 aaKnown RBP eCLIP11.32□□□□□ -0.6
HDAC3-214ENST00000495485 GUCY2CP25092 1073 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 GJA8P48165 433 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 CNTN2Q02246 1040 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 PPP2R3AQ06190 1150 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 NOLC1Q14978 699 aaKnown RBP eCLIP11.32□□□□□ -0.6
HDAC3-214ENST00000495485 KRT31Q15323 416 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 CCL14Q16627 93 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 HSP90AA4PQ58FG1 418 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 MIS18BP1Q6P0N0 1132 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 MYCT1Q8N699 235 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 RETREG2Q8NC44 543 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 ARRDC4Q8NCT1 418 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 KIAA0895Q8NCT3 520 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 SCFD2Q8WU76 684 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 CACTINQ8WUQ7 758 aaKnown RBP11.32□□□□□ -0.6
HDAC3-214ENST00000495485 FGD4Q96M96 766 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 TUBGCP2Q9BSJ2 902 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 SEZ6LQ9BYH1 1024 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 MRPL44Q9H9J2 332 aaKnown RBP11.32□□□□□ -0.6
HDAC3-214ENST00000495485 PARVGQ9HBI0 331 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 RGL1Q9NZL6 768 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 FLRT1Q9NZU1 646 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 DDX20Q9UHI6 824 aaKnown RBP11.32□□□□□ -0.6
HDAC3-214ENST00000495485 PCDHB13Q9Y5F0 798 aa11.32□□□□□ -0.6
HDAC3-214ENST00000495485 MKI67P46013 3256 aaKnown RBP11.32□□□□□ -0.6
HDAC3-214ENST00000495485 TRIM49BA6NDI0 452 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 KIF2AO00139 706 aaPredicted RBP11.31□□□□□ -0.6
HDAC3-214ENST00000495485 DDX39AO00148 427 aaKnown RBP11.31□□□□□ -0.6
HDAC3-214ENST00000495485 PDXKO00764 312 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 CETN3O15182 167 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 DHX15O43143 795 aaKnown RBP11.31□□□□□ -0.6
HDAC3-214ENST00000495485 STX10O60499 249 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 DUSP11O75319 330 aaKnown RBP11.31□□□□□ -0.6
HDAC3-214ENST00000495485 ECM2O94769 699 aaPredicted RBP11.31□□□□□ -0.6
HDAC3-214ENST00000495485 SGPL1O95470 568 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 SNAI1O95863 264 aaPredicted RBP11.31□□□□□ -0.6
HDAC3-214ENST00000495485 ZNF865P0CJ78 1059 aaPredicted RBP11.31□□□□□ -0.6
HDAC3-214ENST00000495485 MAPTP10636 758 aaKnown RBP11.31□□□□□ -0.6
HDAC3-214ENST00000495485 RARBP10826 455 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 ICAM3P32942 547 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 CYP2C19P33261 490 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 PSMC6P62333 389 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 NKX3-2P78367 333 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 UBXN1Q04323 297 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 NEDD9Q14511 834 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 TTLL4Q14679 1199 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 CCDC144BQ3MJ40 725 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 CCDC40Q4G0X9 1142 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 BRDTQ58F21 947 aaPredicted RBP11.31□□□□□ -0.6
HDAC3-214ENST00000495485 ARSHQ5FYA8 562 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 C1orf186Q6ZWK4 172 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 ZNF397Q8NF99 534 aaPredicted RBP11.31□□□□□ -0.6
HDAC3-214ENST00000495485 IL31RAQ8NI17 732 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 GOLGA5Q8TBA6 731 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 DRC1Q96MC2 740 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 MED15Q96RN5 788 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 DUSP9Q99956 384 aaKnown RBP11.31□□□□□ -0.6
HDAC3-214ENST00000495485 REEP2Q9BRK0 252 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 NOC4LQ9BVI4 516 aaKnown RBP11.31□□□□□ -0.6
HDAC3-214ENST00000495485 CRISPLD2Q9H0B8 497 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 VPS16Q9H269 839 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 RRAGDQ9NQL2 400 aaPredicted RBP11.31□□□□□ -0.6
HDAC3-214ENST00000495485 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.31□□□□□ -0.6
HDAC3-214ENST00000495485 SLC9A2Q9UBY0 812 aa11.31□□□□□ -0.6
HDAC3-214ENST00000495485 MYH11P35749 1972 aa11.3□□□□□ -0.6
HDAC3-214ENST00000495485 LGALS16A8MUM7 142 aa11.3□□□□□ -0.6
HDAC3-214ENST00000495485 SPATA31C2B4DYI2 1134 aa11.3□□□□□ -0.6
HDAC3-214ENST00000495485 ARHGAP6O43182 974 aa11.3□□□□□ -0.6
HDAC3-214ENST00000495485 SCP2P22307 547 aa11.3□□□□□ -0.6
HDAC3-214ENST00000495485 TBC1D8BQ0IIM8 1120 aa11.3□□□□□ -0.6
HDAC3-214ENST00000495485 TBX2Q13207 712 aaPredicted RBP11.3□□□□□ -0.6
HDAC3-214ENST00000495485 HSP90AA2PQ14568 343 aaPredicted RBP11.3□□□□□ -0.6
HDAC3-214ENST00000495485 KNOP1Q1ED39 458 aaKnown RBP11.3□□□□□ -0.6
HDAC3-214ENST00000495485 PADI6Q6TGC4 694 aa11.3□□□□□ -0.6
HDAC3-214ENST00000495485 EXOC8Q8IYI6 725 aa11.3□□□□□ -0.6
HDAC3-214ENST00000495485 BANK1Q8NDB2 785 aa11.3□□□□□ -0.6
HDAC3-214ENST00000495485 PIGOQ8TEQ8 1089 aa11.3□□□□□ -0.6
HDAC3-214ENST00000495485 CNOT6LQ96LI5 555 aaKnown RBP11.3□□□□□ -0.6
HDAC3-214ENST00000495485 PANX2Q96RD6 677 aa11.3□□□□□ -0.6
HDAC3-214ENST00000495485 KATNBL1Q9H079 304 aa11.3□□□□□ -0.6
HDAC3-214ENST00000495485 UNC93B1Q9H1C4 597 aa11.3□□□□□ -0.6
HDAC3-214ENST00000495485 KCNF1Q9H3M0 494 aa11.3□□□□□ -0.6
HDAC3-214ENST00000495485 METTL14Q9HCE5 456 aaKnown RBP11.3□□□□□ -0.6
HDAC3-214ENST00000495485 JPH1Q9HDC5 661 aaPredicted RBP11.3□□□□□ -0.6
HDAC3-214ENST00000495485 TAB2Q9NYJ8 693 aa11.3□□□□□ -0.6
HDAC3-214ENST00000495485 PKD2L1Q9P0L9 805 aa11.3□□□□□ -0.6
HDAC3-214ENST00000495485 CGNQ9P2M7 1197 aaKnown RBP11.3□□□□□ -0.6
HDAC3-214ENST00000495485 OGDHLQ9ULD0 1010 aa11.3□□□□□ -0.6
HDAC3-214ENST00000495485 KAT6AQ92794 2004 aa11.3□□□□□ -0.6
HDAC3-214ENST00000495485 GOLGA6L9A6NEM1 432 aa11.29□□□□□ -0.6
HDAC3-214ENST00000495485 H0YCG3 227 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms