RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 KARSQ15046 597 aaKnown RBP12.42□□□□□ -0.42
APTX-230ENST00000494649 CABP7Q86V35 215 aa12.42□□□□□ -0.42
APTX-230ENST00000494649 NEK9Q8TD19 979 aa12.42□□□□□ -0.42
APTX-230ENST00000494649 VWCEQ96DN2 955 aa12.42□□□□□ -0.42
APTX-230ENST00000494649 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.42□□□□□ -0.423e-6■■□□□ 12.8
APTX-230ENST00000494649 POLR3CQ9BUI4 534 aaPredicted RBP12.42□□□□□ -0.42
APTX-230ENST00000494649 TUFT1Q9NNX1 390 aa12.42□□□□□ -0.42
APTX-230ENST00000494649 COL1A2P08123 1366 aa12.42□□□□□ -0.42
APTX-230ENST00000494649 SPTLC2O15270 562 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 DKC1O60832 514 aaKnown RBP eCLIP12.41□□□□□ -0.42
APTX-230ENST00000494649 BMP15O95972 392 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 SSBP05455 408 aaKnown RBP eCLIP12.41□□□□□ -0.42
APTX-230ENST00000494649 IBSPP21815 317 aaPredicted RBP12.41□□□□□ -0.42
APTX-230ENST00000494649 DDIT3P35638 169 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 NASPP49321 788 aaPredicted RBP12.41□□□□□ -0.42
APTX-230ENST00000494649 RARRES1P49788 294 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 SHHQ15465 462 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 TCTN1Q2MV58 587 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 ZNF365Q70YC5 407 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 OTUD6AQ7L8S5 288 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 SLC7A3Q8WY07 619 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 SYMPKQ92797 1274 aaKnown RBP12.41□□□□□ -0.42
APTX-230ENST00000494649 SCLT1Q96NL6 688 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 OSMRQ99650 979 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 BHMT2Q9H2M3 363 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 GPRC5CQ9NQ84 441 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 SMIM35A0A1B0GVV1 85 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 UBA7P41226 1012 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 MRPS6P82932 125 aaKnown RBP12.41□□□□□ -0.42
APTX-230ENST00000494649 RAD51AP2Q09MP3 1159 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 GRB10Q13322 594 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 EMC2Q15006 297 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 RSPH3Q86UC2 560 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 RHPN2Q8IUC4 686 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 TET1Q8NFU7 2136 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 LRRC15Q8TF66 581 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 TMEM40Q8WWA1 233 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 CDK5RAP3Q96JB5 506 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 PNMA5Q96PV4 448 aa12.41□□□□□ -0.42
APTX-230ENST00000494649 SRPRBQ9Y5M8 271 aaKnown RBP12.41□□□□□ -0.42
APTX-230ENST00000494649 ZBBXA8MT70 800 aa12.4□□□□□ -0.42
APTX-230ENST00000494649 M0QZ92 97 aa12.4□□□□□ -0.42
APTX-230ENST00000494649 PDIA4P13667 645 aaKnown RBP12.4□□□□□ -0.42
APTX-230ENST00000494649 ME1P48163 572 aa12.4□□□□□ -0.42
APTX-230ENST00000494649 NLRP11P59045 1033 aaKnown RBP12.4□□□□□ -0.42
APTX-230ENST00000494649 PPIGQ13427 754 aaKnown RBP eCLIP12.4□□□□□ -0.42
APTX-230ENST00000494649 TMCO2Q7Z6W1 182 aaPredicted RBP12.4□□□□□ -0.42
APTX-230ENST00000494649 PDILTQ8N807 584 aa12.4□□□□□ -0.42
APTX-230ENST00000494649 KRI1Q8N9T8 703 aaKnown RBP12.4□□□□□ -0.42
APTX-230ENST00000494649 NLRP4Q96MN2 994 aa12.4□□□□□ -0.42
APTX-230ENST00000494649 NACC1Q96RE7 527 aa12.4□□□□□ -0.42
APTX-230ENST00000494649 MAP7D2Q96T17 732 aa12.4□□□□□ -0.42
APTX-230ENST00000494649 ARHGEF35A5YM69 484 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 MAGEB2O15479 319 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 MAFO75444 373 aaPredicted RBP12.39□□□□□ -0.43
APTX-230ENST00000494649 LYPLA2O95372 231 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 FGFR4P22455 802 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 TMOD1P28289 359 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 LONP1P36776 959 aaKnown RBP12.39□□□□□ -0.43
APTX-230ENST00000494649 MGAT3Q09327 533 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 NLRP7Q8WX94 980 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 MTRQ99707 1265 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 IL23AQ9NPF7 189 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 XPNPEP1Q9NQW7 623 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 CXXC1Q9P0U4 656 aaPredicted RBP12.39□□□□□ -0.43
APTX-230ENST00000494649 SUCLA2Q9P2R7 463 aaPredicted RBP12.39□□□□□ -0.43
APTX-230ENST00000494649 TANC1Q9C0D5 1861 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 SRGAP2CP0DJJ0 459 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 PLCG1P19174 1290 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 CACNB1Q02641 598 aaPredicted RBP12.39□□□□□ -0.43
APTX-230ENST00000494649 RBL2Q08999 1139 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 NFX1Q12986 1120 aaKnown RBP12.39□□□□□ -0.43
APTX-230ENST00000494649 TMEM240Q5SV17 173 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 IER5Q5VY09 327 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 PADI6Q6TGC4 694 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 LINC01465Q8N7H1 131 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 DBF4BQ8NFT6 615 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 SPATA32Q96LK8 384 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 RNPC3Q96LT9 517 aaKnown RBP12.39□□□□□ -0.43
APTX-230ENST00000494649 CELF4Q9BZC1 486 aaKnown RBP12.39□□□□□ -0.43
APTX-230ENST00000494649 DHX33Q9H6R0 707 aaKnown RBP12.39□□□□□ -0.43
APTX-230ENST00000494649 AGO3Q9H9G7 860 aaKnown RBP12.39□□□□□ -0.43
APTX-230ENST00000494649 CFAP45Q9UL16 551 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 DNM3Q9UQ16 869 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 TRPV2Q9Y5S1 764 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 TRIOBPQ9H2D6 2365 aa12.39□□□□□ -0.43
APTX-230ENST00000494649 SIP14410 1827 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.38□□□□□ -0.43
APTX-230ENST00000494649 YEATS4O95619 227 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 CD52P31358 61 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 KRT85P78386 507 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 NUCB2P80303 420 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 LPIN1Q14693 890 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 FAM102BQ5T8I3 360 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 PRPF31Q8WWY3 499 aaKnown RBP12.38□□□□□ -0.43
APTX-230ENST00000494649 CALML4Q96GE6 196 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 AK8Q96MA6 479 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 IFIH1Q9BYX4 1025 aaKnown RBP12.38□□□□□ -0.43
APTX-230ENST00000494649 ATP6V0A4Q9HBG4 840 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 ANKEF1Q9NU02 776 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms