RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 TSPYL2Q9H2G4 693 aaPredicted RBP37.32■■■■□ 3.56
CBX4-203ENST00000494546 ERVK-5Q9HDB9 667 aa37.32■■■■□ 3.56
CBX4-203ENST00000494546 DDX11L8A8MPP1 907 aa37.31■■■■□ 3.56
CBX4-203ENST00000494546 STBD1O95210 358 aa37.31■■■■□ 3.56
CBX4-203ENST00000494546 BAG4O95429 457 aaKnown RBP37.31■■■■□ 3.56
CBX4-203ENST00000494546 NLRP11P59045 1033 aaKnown RBP37.31■■■■□ 3.56
CBX4-203ENST00000494546 TARBP2Q15633 366 aaKnown RBP37.31■■■■□ 3.56
CBX4-203ENST00000494546 C8orf76Q96K31 380 aa37.31■■■■□ 3.56
CBX4-203ENST00000494546 COL4A4P53420 1690 aaPredicted RBP37.31■■■■□ 3.56
CBX4-203ENST00000494546 UNC80Q8N2C7 3258 aa37.3■■■■□ 3.56
CBX4-203ENST00000494546 IBSPP21815 317 aaPredicted RBP37.3■■■■□ 3.56
CBX4-203ENST00000494546 SAFBQ15424 915 aaKnown RBP eCLIP37.3■■■■□ 3.56
CBX4-203ENST00000494546 ODR4Q5SWX8 454 aa37.3■■■■□ 3.56
CBX4-203ENST00000494546 SLFN12Q8IYM2 578 aa37.3■■■■□ 3.56
CBX4-203ENST00000494546 ST3GAL5Q9UNP4 418 aa37.3■■■■□ 3.56
CBX4-203ENST00000494546 GPR182O15218 404 aa37.29■■■■□ 3.56
CBX4-203ENST00000494546 RABEP1Q15276 862 aa37.29■■■■□ 3.56
CBX4-203ENST00000494546 SKIV2LQ15477 1246 aaKnown RBP37.29■■■■□ 3.56
CBX4-203ENST00000494546 NCAPH2Q6IBW4 605 aa37.29■■■■□ 3.56
CBX4-203ENST00000494546 FIBCD1Q8N539 461 aa37.29■■■■□ 3.56
CBX4-203ENST00000494546 ZNF668Q96K58 619 aaPredicted RBP37.29■■■■□ 3.56
CBX4-203ENST00000494546 SAMD11Q96NU1 681 aa37.29■■■■□ 3.56
CBX4-203ENST00000494546 UPF2Q9HAU5 1272 aaKnown RBP37.29■■■■□ 3.56
CBX4-203ENST00000494546 QARSP47897 775 aaKnown RBP37.28■■■■□ 3.56
CBX4-203ENST00000494546 EPC2Q52LR7 807 aa37.28■■■■□ 3.56
CBX4-203ENST00000494546 THEGQ9P2T0 379 aa37.28■■■■□ 3.56
CBX4-203ENST00000494546 P4HBP07237 508 aaKnown RBP37.27■■■■□ 3.56
CBX4-203ENST00000494546 HMGN5P82970 282 aaKnown RBP37.27■■■■□ 3.56
CBX4-203ENST00000494546 FAM228AQ86W67 206 aa37.27■■■■□ 3.56
CBX4-203ENST00000494546 NPAS4Q8IUM7 802 aa37.27■■■■□ 3.56
CBX4-203ENST00000494546 TMEM192Q8IY95 271 aa37.27■■■■□ 3.56
CBX4-203ENST00000494546 FAM184AQ8NB25 1140 aa37.27■■■■□ 3.56
CBX4-203ENST00000494546 ADGRA3Q8IWK6 1321 aa37.27■■■■□ 3.56
CBX4-203ENST00000494546 COL4A6Q14031 1691 aa37.27■■■■□ 3.56
CBX4-203ENST00000494546 TTC3P53804 2025 aa37.26■■■■□ 3.56
CBX4-203ENST00000494546 DENND3A2RUS2 1198 aa37.26■■■■□ 3.56
CBX4-203ENST00000494546 WNT7AO00755 349 aa37.26■■■■□ 3.56
CBX4-203ENST00000494546 MGEA5O60502 916 aa37.26■■■■□ 3.56
CBX4-203ENST00000494546 EPHA7Q15375 998 aa37.26■■■■□ 3.56
CBX4-203ENST00000494546 CALCRLQ16602 461 aa37.26■■■■□ 3.56
CBX4-203ENST00000494546 PLA2G4FQ68DD2 849 aa37.26■■■■□ 3.56
CBX4-203ENST00000494546 ANO5Q75V66 913 aa37.26■■■■□ 3.56
CBX4-203ENST00000494546 SCLT1Q96NL6 688 aa37.26■■■■□ 3.56
CBX4-203ENST00000494546 ADAM2Q99965 735 aa37.26■■■■□ 3.56
CBX4-203ENST00000494546 ADAMTS10Q9H324 1103 aa37.26■■■■□ 3.56
CBX4-203ENST00000494546 RC3H2Q9HBD1 1191 aaKnown RBP37.26■■■■□ 3.56
CBX4-203ENST00000494546 PRRC2BQ5JSZ5 2229 aaKnown RBP37.25■■■■□ 3.55
CBX4-203ENST00000494546 DKC1O60832 514 aaKnown RBP eCLIP37.25■■■■□ 3.55
CBX4-203ENST00000494546 DGKIO75912 1065 aa37.25■■■■□ 3.55
CBX4-203ENST00000494546 STAG3L1P0CL83 205 aa37.25■■■■□ 3.55
CBX4-203ENST00000494546 ATP2B1P20020 1258 aa37.25■■■■□ 3.55
CBX4-203ENST00000494546 BTG3Q14201 252 aaPredicted RBP37.25■■■■□ 3.55
CBX4-203ENST00000494546 ZNF710Q8N1W2 664 aa37.25■■■■□ 3.55
CBX4-203ENST00000494546 ZNF689Q96CS4 500 aaPredicted RBP37.25■■■■□ 3.55
CBX4-203ENST00000494546 CEP89Q96ST8 783 aa37.25■■■■□ 3.55
CBX4-203ENST00000494546 LMCD1Q9NZU5 365 aa37.25■■■■□ 3.55
CBX4-203ENST00000494546 LRFN2Q9ULH4 789 aa37.25■■■■□ 3.55
CBX4-203ENST00000494546 NEMFO60524 1076 aa37.24■■■■□ 3.55
CBX4-203ENST00000494546 GPC3P51654 580 aa37.24■■■■□ 3.55
CBX4-203ENST00000494546 SPIRE1Q08AE8 756 aa37.24■■■■□ 3.55
CBX4-203ENST00000494546 DRP2Q13474 957 aa37.24■■■■□ 3.55
CBX4-203ENST00000494546 RGL1Q9NZL6 768 aa37.24■■■■□ 3.55
CBX4-203ENST00000494546 A0A0C4DFX4 3053 aa37.23■■■■□ 3.55
CBX4-203ENST00000494546 ST18O60284 1047 aa37.23■■■■□ 3.55
CBX4-203ENST00000494546 SARSP49591 514 aaKnown RBP37.23■■■■□ 3.55
CBX4-203ENST00000494546 FAM43BQ6ZT52 329 aaPredicted RBP37.23■■■■□ 3.55
CBX4-203ENST00000494546 CRIPAKQ8N1N5 446 aa37.23■■■■□ 3.55
CBX4-203ENST00000494546 LXNQ9BS40 222 aa37.23■■■■□ 3.55
CBX4-203ENST00000494546 COL25A1Q9BXS0 654 aaPredicted RBP37.23■■■■□ 3.55
CBX4-203ENST00000494546 WRAP73Q9P2S5 460 aaPredicted RBP37.23■■■■□ 3.55
CBX4-203ENST00000494546 PCDHA12Q9UN75 941 aa37.23■■■■□ 3.55
CBX4-203ENST00000494546 TRANK1O15050 2925 aa37.22■■■■□ 3.55
CBX4-203ENST00000494546 EIF4BP23588 611 aaKnown RBP37.22■■■■□ 3.55
CBX4-203ENST00000494546 CTNNB1P35222 781 aa37.22■■■■□ 3.55
CBX4-203ENST00000494546 DNM2P50570 870 aa37.22■■■■□ 3.55
CBX4-203ENST00000494546 NLRP7Q8WX94 980 aa37.22■■■■□ 3.55
CBX4-203ENST00000494546 DYDC2Q96IM9 177 aa37.22■■■■□ 3.55
CBX4-203ENST00000494546 CYP26B1Q9NR63 512 aa37.22■■■■□ 3.55
CBX4-203ENST00000494546 RGS18Q9NS28 235 aa37.22■■■■□ 3.55
CBX4-203ENST00000494546 C1orf112Q9NSG2 853 aa37.22■■■■□ 3.55
CBX4-203ENST00000494546 IGKV6-21A0A0C4DH24 114 aa37.21■■■■□ 3.55
CBX4-203ENST00000494546 MAFO75444 373 aaPredicted RBP37.21■■■■□ 3.55
CBX4-203ENST00000494546 NPEPPSP55786 919 aa37.21■■■■□ 3.55
CBX4-203ENST00000494546 CYP4A11Q02928 519 aa37.21■■■■□ 3.55
CBX4-203ENST00000494546 GPM6BQ13491 265 aa37.21■■■■□ 3.55
CBX4-203ENST00000494546 FBXO18Q8NFZ0 1043 aa37.21■■■■□ 3.55
CBX4-203ENST00000494546 ATXN2LQ8WWM7 1075 aaKnown RBP37.21■■■■□ 3.55
CBX4-203ENST00000494546 PCDHB7Q9Y5E2 793 aa37.21■■■■□ 3.55
CBX4-203ENST00000494546 H3BNC9 293 aa37.2■■■■□ 3.55
CBX4-203ENST00000494546 TXKP42681 527 aa37.2■■■■□ 3.55
CBX4-203ENST00000494546 CTTNQ14247 550 aaKnown RBP37.2■■■■□ 3.55
CBX4-203ENST00000494546 SLC24A5Q71RS6 500 aa37.2■■■■□ 3.55
CBX4-203ENST00000494546 CEP170P1Q96L14 293 aa37.2■■■■□ 3.55
CBX4-203ENST00000494546 TTC12Q9H892 705 aaPredicted RBP37.2■■■■□ 3.55
CBX4-203ENST00000494546 MCM7P33993 719 aa37.19■■■■□ 3.54
CBX4-203ENST00000494546 GNL2Q13823 731 aaKnown RBP37.19■■■■□ 3.54
CBX4-203ENST00000494546 PAN2Q504Q3 1202 aaKnown RBP37.19■■■■□ 3.54
CBX4-203ENST00000494546 C4orf19Q8IY42 314 aa37.19■■■■□ 3.54
CBX4-203ENST00000494546 FOXP1Q9H334 677 aaPredicted RBP37.19■■■■□ 3.54
CBX4-203ENST00000494546 ZSWIM4Q9H7M6 989 aa37.19■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms