RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 KRTAP4-6Q9BYQ5 205 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 CNTD2Q9H8S5 307 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 ZWILCHQ9H900 591 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 PLSCR4Q9NRQ2 329 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 ORC3Q9UBD5 711 aaPredicted RBP7.74□□□□□ -1.17
SNX13-210ENST00000494402 STAP2Q9UGK3 403 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 CSADQ9Y600 493 aa7.74□□□□□ -1.17
SNX13-210ENST00000494402 IGF1RP08069 1367 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 GPRASP1Q5JY77 1395 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 A0A1W2PPH5 198 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 TRIM64CA6NLI5 447 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 SOX1O00570 391 aaPredicted RBP7.73□□□□□ -1.17
SNX13-210ENST00000494402 DDX3XO00571 662 aaKnown RBP eCLIP7.73□□□□□ -1.17
SNX13-210ENST00000494402 APOL1O14791 398 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 CPLX1O14810 134 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 WNT9AO14904 365 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 ZNF862O60290 1169 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 F11P03951 625 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 ATP6V1B1P15313 513 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 ALOX12P18054 663 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 ENPP1P22413 925 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 PEX19P40855 299 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 TUBP50607 506 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 ITGA8P53708 1063 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 ZNF445P59923 1031 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 TLE2Q04725 743 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 PDE3AQ14432 1141 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 POU4F3Q15319 338 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 NBPF12Q5TAG4 269 aaPredicted RBP7.73□□□□□ -1.17
SNX13-210ENST00000494402 NUGGCQ68CJ6 796 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 SLC30A6Q6NXT4 461 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 LBX2Q6XYB7 198 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 CEP57L1Q8IYX8 460 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 CISD2Q8N5K1 135 aaKnown RBP7.73□□□□□ -1.17
SNX13-210ENST00000494402 CCDC191Q8NCU4 936 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 LSM14AQ8ND56 463 aaKnown RBP7.73□□□□□ -1.17
SNX13-210ENST00000494402 SIMC1Q8NDZ2 872 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 CYB5D2Q8WUJ1 264 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 ATP2A3Q93084 1043 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 FBXW5Q969U6 566 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 SPATA17Q96L03 361 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 PYM1Q9BRP8 204 aaKnown RBP7.73□□□□□ -1.17
SNX13-210ENST00000494402 CNPPD1Q9BV87 410 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 UNKQ9C0B0 810 aaKnown RBP7.73□□□□□ -1.17
SNX13-210ENST00000494402 MS4A5Q9H3V2 200 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 STXBP5LQ9Y2K9 1186 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 PCDHGC4Q9Y5F7 938 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 NPFFR2Q9Y5X5 522 aa7.73□□□□□ -1.17
SNX13-210ENST00000494402 DCDC2BA2VCK2 349 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 H7C0S8 307 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 ACKR2O00590 384 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 HTATSF1O43719 755 aaKnown RBP7.72□□□□□ -1.17
SNX13-210ENST00000494402 MAFO75444 373 aaPredicted RBP7.72□□□□□ -1.17
SNX13-210ENST00000494402 KRT37O76014 449 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 UPP2O95045 317 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 STARD3NLO95772 234 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 SLC9A1P19634 815 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 ITIH2P19823 946 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 CEBPAP49715 358 aaPredicted RBP7.72□□□□□ -1.17
SNX13-210ENST00000494402 RNF4P78317 190 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 CYP4F3Q08477 520 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 CDC16Q13042 620 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 TRPC3Q13507 836 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 KRT32Q14532 448 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 LBRQ14739 615 aaKnown RBP7.72□□□□□ -1.17
SNX13-210ENST00000494402 FAM110CQ1W6H9 321 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 KIF4BQ2VIQ3 1234 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 NBPF9Q3BBW0 867 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 ISM2Q6H9L7 571 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 C16orf59Q7L2K0 433 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 KRT74Q7RTS7 529 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 RAB44Q7Z6P3 723 aaPredicted RBP7.72□□□□□ -1.17
SNX13-210ENST00000494402 FIBCD1Q8N539 461 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 TSPYL6Q8N831 410 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 OR8H1Q8NGG4 311 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 RFFLQ8WZ73 363 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 C7orf26Q96N11 449 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 C22orf23Q9BZE7 217 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 KIAA1683Q9H0B3 1180 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 ABCF3Q9NUQ8 709 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 CEP72Q9P209 647 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 EPS15L1Q9UBC2 864 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 RNF112Q9ULX5 631 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 HIF3AQ9Y2N7 669 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 PCDHB12Q9Y5F1 795 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 USP19O94966 1318 aa7.72□□□□□ -1.17
SNX13-210ENST00000494402 SYT5O00445 386 aa7.71□□□□□ -1.18
SNX13-210ENST00000494402 MEFVO15553 781 aaPredicted RBP7.71□□□□□ -1.18
SNX13-210ENST00000494402 PLA2G6O60733 806 aa7.71□□□□□ -1.18
SNX13-210ENST00000494402 USO1O60763 962 aaKnown RBP7.71□□□□□ -1.18
SNX13-210ENST00000494402 TADA3O75528 432 aa7.71□□□□□ -1.18
SNX13-210ENST00000494402 IL18RAPO95256 599 aa7.71□□□□□ -1.18
SNX13-210ENST00000494402 PAPLNO95428 1278 aa7.71□□□□□ -1.18
SNX13-210ENST00000494402 AVPP01185 164 aa7.71□□□□□ -1.18
SNX13-210ENST00000494402 HARSP12081 509 aaKnown RBP7.71□□□□□ -1.18
SNX13-210ENST00000494402 MTHFD2P13995 350 aa7.71□□□□□ -1.18
SNX13-210ENST00000494402 FOSL1P15407 271 aa7.71□□□□□ -1.18
SNX13-210ENST00000494402 ATP6V1E1P36543 226 aa7.71□□□□□ -1.18
SNX13-210ENST00000494402 PAPOLAP51003 745 aaKnown RBP7.71□□□□□ -1.18
SNX13-210ENST00000494402 SLC5A3P53794 718 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms