RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 ODR4Q5SWX8 454 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 DPY19L2P1Q6NXN4 242 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 ALKBH5Q6P6C2 394 aaKnown RBP10.54□□□□□ -0.72
NPHP3-209ENST00000493732 H2AFVQ71UI9 128 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 NIM1KQ8IY84 436 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 ANKRD13CQ8N6S4 541 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 EIF1ADQ8N9N8 165 aaKnown RBP10.54□□□□□ -0.72
NPHP3-209ENST00000493732 PIGOQ8TEQ8 1089 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 AENQ8WTP8 325 aaKnown RBP10.54□□□□□ -0.72
NPHP3-209ENST00000493732 BORCS6Q96GS4 357 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 VEZTQ9HBM0 779 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 TBC1D22BQ9NU19 505 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 DMAC2Q9NW81 257 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 SALL4Q9UJQ4 1053 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 NAGPAQ9UK23 515 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 DBR1Q9UK59 544 aaKnown RBP10.54□□□□□ -0.72
NPHP3-209ENST00000493732 HPCAL4Q9UM19 191 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 A6NNZ2 444 aa10.53□□□□□ -0.72
NPHP3-209ENST00000493732 P4HA2O15460 535 aa10.53□□□□□ -0.72
NPHP3-209ENST00000493732 CHMP2AO43633 222 aa10.53□□□□□ -0.72
NPHP3-209ENST00000493732 OPA1O60313 960 aa10.53□□□□□ -0.72
NPHP3-209ENST00000493732 RAD17O75943 681 aa10.53□□□□□ -0.72
NPHP3-209ENST00000493732 APBA1Q02410 837 aa10.53□□□□□ -0.72
NPHP3-209ENST00000493732 CLUL1Q15846 466 aa10.53□□□□□ -0.72
NPHP3-209ENST00000493732 TUBB8Q3ZCM7 444 aa10.53□□□□□ -0.72
NPHP3-209ENST00000493732 ALS2CLQ60I27 953 aa10.53□□□□□ -0.72
NPHP3-209ENST00000493732 LEKR1Q6ZMV7 388 aa10.53□□□□□ -0.72
NPHP3-209ENST00000493732 MIER3Q7Z3K6 550 aa10.53□□□□□ -0.72
NPHP3-209ENST00000493732 LXNQ9BS40 222 aa10.53□□□□□ -0.72
NPHP3-209ENST00000493732 LRRC1Q9BTT6 524 aa10.53□□□□□ -0.72
NPHP3-209ENST00000493732 STK33Q9BYT3 514 aa10.53□□□□□ -0.72
NPHP3-209ENST00000493732 UNC45AQ9H3U1 944 aa10.53□□□□□ -0.72
NPHP3-209ENST00000493732 SUGCTQ9HAC7 445 aa10.53□□□□□ -0.72
NPHP3-209ENST00000493732 RNF216Q9NWF9 866 aaPredicted RBP10.53□□□□□ -0.72
NPHP3-209ENST00000493732 CCPG1Q9ULG6 757 aa10.53□□□□□ -0.72
NPHP3-209ENST00000493732 TNS1Q9HBL0 1735 aaKnown RBP10.53□□□□□ -0.72
NPHP3-209ENST00000493732 RPTORQ8N122 1335 aa10.53□□□□□ -0.72
NPHP3-209ENST00000493732 GOLGA6BA6NDN3 693 aa10.52□□□□□ -0.72
NPHP3-209ENST00000493732 LYPLA2O95372 231 aa10.52□□□□□ -0.72
NPHP3-209ENST00000493732 IVLP07476 585 aa10.52□□□□□ -0.72
NPHP3-209ENST00000493732 KRT13P13646 458 aa10.52□□□□□ -0.72
NPHP3-209ENST00000493732 FMO5P49326 533 aa10.52□□□□□ -0.72
NPHP3-209ENST00000493732 PAK2Q13177 524 aa10.52□□□□□ -0.72
NPHP3-209ENST00000493732 MUM1L1Q5H9M0 696 aa10.52□□□□□ -0.72
NPHP3-209ENST00000493732 KIAA1755Q5JYT7 1200 aa10.52□□□□□ -0.72
NPHP3-209ENST00000493732 POTEHQ6S545 545 aa10.52□□□□□ -0.72
NPHP3-209ENST00000493732 ZNF571Q7Z3V5 609 aaPredicted RBP10.52□□□□□ -0.72
NPHP3-209ENST00000493732 C12orf56Q8IXR9 622 aa10.52□□□□□ -0.72
NPHP3-209ENST00000493732 SYCP3Q8IZU3 236 aa10.52□□□□□ -0.72
NPHP3-209ENST00000493732 CAVIN3Q969G5 261 aa10.52□□□□□ -0.72
NPHP3-209ENST00000493732 AGPAT3Q9NRZ7 376 aa10.52□□□□□ -0.72
NPHP3-209ENST00000493732 TCEAL9Q9UHQ7 104 aa10.52□□□□□ -0.72
NPHP3-209ENST00000493732 DIS3Q9Y2L1 958 aaKnown RBP10.52□□□□□ -0.72
NPHP3-209ENST00000493732 CLIC2O15247 247 aa10.52□□□□□ -0.73
NPHP3-209ENST00000493732 MAPK13O15264 365 aa10.52□□□□□ -0.73
NPHP3-209ENST00000493732 ARP10275 920 aa10.52□□□□□ -0.73
NPHP3-209ENST00000493732 ACTN1P12814 892 aa10.52□□□□□ -0.73
NPHP3-209ENST00000493732 NMT1P30419 496 aaKnown RBP10.52□□□□□ -0.73
NPHP3-209ENST00000493732 SOX5P35711 763 aa10.52□□□□□ -0.73
NPHP3-209ENST00000493732 CASP4P49662 377 aa10.52□□□□□ -0.73
NPHP3-209ENST00000493732 PCNX4Q63HM2 1172 aa10.52□□□□□ -0.73
NPHP3-209ENST00000493732 XRRA1Q6P2D8 792 aa10.52□□□□□ -0.73
NPHP3-209ENST00000493732 INTS8Q75QN2 995 aaKnown RBP10.52□□□□□ -0.73
NPHP3-209ENST00000493732 SLC16A10Q8TF71 515 aa10.52□□□□□ -0.73
NPHP3-209ENST00000493732 ZBED3Q96IU2 234 aaPredicted RBP10.52□□□□□ -0.73
NPHP3-209ENST00000493732 STRA6Q9BX79 667 aa10.52□□□□□ -0.73
NPHP3-209ENST00000493732 SIX2Q9NPC8 291 aa10.52□□□□□ -0.73
NPHP3-209ENST00000493732 FAN1Q9Y2M0 1017 aa10.52□□□□□ -0.73
NPHP3-209ENST00000493732 CTDP1Q9Y5B0 961 aaPredicted RBP10.52□□□□□ -0.73
NPHP3-209ENST00000493732 ZMYM2Q9UBW7 1377 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 SFI1A8K8P3 1242 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 GOLGA8KD6RF30 607 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 CCDC188H7C350 402 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 EXOC3O60645 756 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 RNF40O75150 1001 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 RPS6KA5O75582 802 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 CXCR5P32302 372 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 ACTN2P35609 894 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 NOP2P46087 812 aaKnown RBP10.51□□□□□ -0.73
NPHP3-209ENST00000493732 LMAN1P49257 510 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 PPFIA1Q13136 1202 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 PPP2R5EQ16537 467 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 PADI6Q6TGC4 694 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 ACTRT1Q8TDG2 376 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 AFAP1L1Q8TED9 768 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 CCDC43Q96MW1 224 aaKnown RBP10.51□□□□□ -0.73
NPHP3-209ENST00000493732 ACCSQ96QU6 501 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 CAMKK2Q96RR4 588 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 FIZ1Q96SL8 496 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 RUFY1Q96T51 708 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 TMEM39BQ9GZU3 492 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 KIAA1683Q9H0B3 1180 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 ST6GALNAC4Q9H4F1 302 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 KCNH7Q9NS40 1196 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 NENFQ9UMX5 172 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 MYH10P35580 1976 aa10.51□□□□□ -0.73
NPHP3-209ENST00000493732 ERICH4A6NGS2 130 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 NCK2O43639 380 aa10.5□□□□□ -0.73
NPHP3-209ENST00000493732 DKC1O60832 514 aaKnown RBP eCLIP10.5□□□□□ -0.73
NPHP3-209ENST00000493732 HSF2BPO75031 334 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms