RNA–Protein interactions for RNA: ENST00000493359.1

NCKAP1-207, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 615 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-207ENST00000493359 MAN1A2O60476 641 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 CFBP00751 764 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 ICAM1P05362 532 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 PSAPP07602 524 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 POLR2MP0CAP2 368 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 HMGCS2P54868 508 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 RBL2Q08999 1139 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 LBRQ14739 615 aaKnown RBP7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 SPECC1Q5M775 1068 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 PEAR1Q5VY43 1037 aaPredicted RBP7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 USP17L6PQ6QN14 398 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 KRBA2Q6ZNG9 492 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 RBM43Q6ZSC3 357 aaKnown RBP7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 ARMC9Q7Z3E5 817 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 RNF214Q8ND24 703 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 GLIS3Q8NEA6 775 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 C12orf42Q96LP6 360 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 GSX2Q9BZM3 304 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 NAT10Q9H0A0 1025 aaKnown RBP7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 TAF1DQ9H5J8 278 aaPredicted RBP7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 ZSWIM4Q9H7M6 989 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 FBXO28Q9NVF7 368 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 ANO10Q9NW15 660 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 DDX25Q9UHL0 483 aaKnown RBP7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 USP25Q9UHP3 1055 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 PPM1HQ9ULR3 514 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 FZD1Q9UP38 647 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 TMA7Q9Y2S6 64 aaKnown RBP7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 PCDHGC4Q9Y5F7 938 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 MRVI1Q9Y6F6 885 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 WDR90Q96KV7 1748 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 SCN4AP35499 1836 aa7.57□□□□□ -1.2
NCKAP1-207ENST00000493359 TCHHQ07283 1943 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 TMEM238LA0A1B0GVL6 79 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 POLR2DO15514 142 aaKnown RBP7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 USP2O75604 605 aaPredicted RBP7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 TDP2O95551 362 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 CAVIN2O95810 425 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 SSBP05455 408 aaKnown RBP eCLIP7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 FAM157BP0CG42 384 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 UBA7P41226 1012 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 GRIN1Q05586 938 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 HYAL2Q12891 473 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 VGLL4Q14135 290 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 ANO6Q4KMQ2 910 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 PPP4R3AQ6IN85 833 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 LDHDQ86WU2 507 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 ANKRD13AQ8IZ07 590 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 PDILTQ8N807 584 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 C3orf58Q8NDZ4 430 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 DHX58Q96C10 678 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 CDK5RAP3Q96JB5 506 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 AK8Q96MA6 479 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 RBSNQ9H1K0 784 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 ZFYVE1Q9HBF4 777 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 SALL4Q9UJQ4 1053 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 DNMT3LQ9UJW3 386 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 PPP1R9AQ9ULJ8 1098 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 SNCAIPQ9Y6H5 919 aa7.56□□□□□ -1.2
NCKAP1-207ENST00000493359 MEIS2O14770 477 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 FBXO24O75426 580 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 SMC2O95347 1197 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 ALAS1P13196 640 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 NFKB1P19838 968 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 CDK11BP21127 795 aaKnown RBP7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 HOXA13P31271 388 aaPredicted RBP7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 SREBF1P36956 1147 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 EIF4A3P38919 411 aaKnown RBP7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 STAT6P42226 847 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 TXKP42681 527 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 USP11P51784 963 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 TPM4P67936 248 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 POSTNQ15063 836 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 UVSSAQ2YD98 709 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 MOXD1Q6UVY6 613 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 GADL1Q6ZQY3 521 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 CABP7Q86V35 215 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 FCHSD1Q86WN1 690 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 ERO1BQ86YB8 467 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 ELOA2Q8IYF1 753 aaPredicted RBP7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 CPXCR1Q8N123 301 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 SAMD3Q8N6K7 520 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 C4orf32Q8N8J7 132 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 IQUBQ8NA54 791 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 SMARCE1Q969G3 411 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 CALML4Q96GE6 196 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 EPSTI1Q96J88 318 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 SPACA7Q96KW9 195 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 TMEM74Q96NL1 305 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 OSMRQ99650 979 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 FUCA2Q9BTY2 467 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 PANK2Q9BZ23 570 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 TMEM60Q9H2L4 133 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 ZNF408Q9H9D4 720 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 SLC38A10Q9HBR0 1119 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 RAVER2Q9HCJ3 691 aaKnown RBP7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 RABGAP1Q9Y3P9 1069 aa7.55□□□□□ -1.2
NCKAP1-207ENST00000493359 AFG3L2Q9Y4W6 797 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms