RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 PYM1Q9BRP8 204 aaKnown RBP19.14■□□□□ 0.65
LIME1-208ENST00000493265 PRKAG2Q9UGJ0 569 aa19.14■□□□□ 0.65
LIME1-208ENST00000493265 ATP11BQ9Y2G3 1177 aa19.14■□□□□ 0.65
LIME1-208ENST00000493265 ZBTB42B2RXF5 422 aa19.13■□□□□ 0.65
LIME1-208ENST00000493265 XRCC6P12956 609 aaKnown RBP eCLIP19.13■□□□□ 0.65
LIME1-208ENST00000493265 AFMP43652 599 aa19.13■□□□□ 0.65
LIME1-208ENST00000493265 POLGP54098 1239 aaPredicted RBP19.13■□□□□ 0.65
LIME1-208ENST00000493265 TBC1D8BQ0IIM8 1120 aa19.13■□□□□ 0.65
LIME1-208ENST00000493265 HIC1Q14526 733 aa19.13■□□□□ 0.65
LIME1-208ENST00000493265 PADI6Q6TGC4 694 aa19.13■□□□□ 0.65
LIME1-208ENST00000493265 SV2BQ7L1I2 683 aa19.13■□□□□ 0.65
LIME1-208ENST00000493265 GPBP1Q86WP2 473 aa19.13■□□□□ 0.65
LIME1-208ENST00000493265 GRAMD1CQ8IYS0 662 aa19.13■□□□□ 0.65
LIME1-208ENST00000493265 CNNM3Q8NE01 707 aa19.13■□□□□ 0.65
LIME1-208ENST00000493265 LMBR1Q8WVP7 490 aa19.13■□□□□ 0.65
LIME1-208ENST00000493265 NRCAMQ92823 1304 aa19.12■□□□□ 0.65
LIME1-208ENST00000493265 NPHP3-ACAD11A0A0J9YXS1 232 aa19.12■□□□□ 0.65
LIME1-208ENST00000493265 RRN3P2A6NIE6 340 aa19.12■□□□□ 0.65
LIME1-208ENST00000493265 ACTN4O43707 911 aaKnown RBP19.12■□□□□ 0.65
LIME1-208ENST00000493265 KINO60870 393 aaKnown RBP19.12■□□□□ 0.65
LIME1-208ENST00000493265 KRT18P05783 430 aaKnown RBP19.12■□□□□ 0.65
LIME1-208ENST00000493265 KLRC1P26715 233 aa19.12■□□□□ 0.65
LIME1-208ENST00000493265 SLC12A3P55017 1021 aa19.12■□□□□ 0.65
LIME1-208ENST00000493265 SNW1Q13573 536 aaKnown RBP19.12■□□□□ 0.65
LIME1-208ENST00000493265 GDF6Q6KF10 455 aaPredicted RBP19.12■□□□□ 0.65
LIME1-208ENST00000493265 NFRKBQ6P4R8 1299 aa19.12■□□□□ 0.65
LIME1-208ENST00000493265 METTL13Q8N6R0 699 aa19.12■□□□□ 0.65
LIME1-208ENST00000493265 SYT2Q8N9I0 419 aaPredicted RBP19.12■□□□□ 0.65
LIME1-208ENST00000493265 ENGASEQ8NFI3 743 aa19.12■□□□□ 0.65
LIME1-208ENST00000493265 RUSC1Q9BVN2 902 aa19.12■□□□□ 0.65
LIME1-208ENST00000493265 SUGCTQ9HAC7 445 aa19.12■□□□□ 0.65
LIME1-208ENST00000493265 POLD4Q9HCU8 107 aa19.12■□□□□ 0.65
LIME1-208ENST00000493265 DACT1Q9NYF0 836 aa19.12■□□□□ 0.65
LIME1-208ENST00000493265 GTF2IRD1Q9UHL9 959 aa19.12■□□□□ 0.65
LIME1-208ENST00000493265 SCN10AQ9Y5Y9 1956 aa19.12■□□□□ 0.65
LIME1-208ENST00000493265 LAMA2P24043 3122 aaKnown RBP19.11■□□□□ 0.65
LIME1-208ENST00000493265 ARID2Q68CP9 1835 aa19.11■□□□□ 0.65
LIME1-208ENST00000493265 COL1A2P08123 1366 aa19.11■□□□□ 0.65
LIME1-208ENST00000493265 ARVCFO00192 962 aa19.11■□□□□ 0.65
LIME1-208ENST00000493265 TREHO43280 583 aa19.11■□□□□ 0.65
LIME1-208ENST00000493265 SLFN14P0C7P3 912 aa19.11■□□□□ 0.65
LIME1-208ENST00000493265 GNAT1P11488 350 aa19.11■□□□□ 0.65
LIME1-208ENST00000493265 TARBP2Q15633 366 aaKnown RBP19.11■□□□□ 0.65
LIME1-208ENST00000493265 SLC39A5Q6ZMH5 540 aa19.11■□□□□ 0.65
LIME1-208ENST00000493265 KRBA2Q6ZNG9 492 aa19.11■□□□□ 0.65
LIME1-208ENST00000493265 LRRC71Q8N4P6 559 aa19.11■□□□□ 0.65
LIME1-208ENST00000493265 KCTD17Q8N5Z5 321 aa19.11■□□□□ 0.65
LIME1-208ENST00000493265 GPT2Q8TD30 523 aa19.11■□□□□ 0.65
LIME1-208ENST00000493265 CUEDC2Q9H467 287 aa19.11■□□□□ 0.65
LIME1-208ENST00000493265 PRDM5Q9NQX1 630 aaPredicted RBP19.11■□□□□ 0.65
LIME1-208ENST00000493265 TRMT13Q9NUP7 481 aaKnown RBP19.11■□□□□ 0.65
LIME1-208ENST00000493265 USP25Q9UHP3 1055 aa19.11■□□□□ 0.65
LIME1-208ENST00000493265 TUBE1Q9UJT0 475 aa19.11■□□□□ 0.65
LIME1-208ENST00000493265 NOD1Q9Y239 953 aa19.11■□□□□ 0.65
LIME1-208ENST00000493265 UNC80Q8N2C7 3258 aa19.11■□□□□ 0.65
LIME1-208ENST00000493265 C22orf31O95567 290 aa19.1■□□□□ 0.65
LIME1-208ENST00000493265 CASP1P29466 404 aa19.1■□□□□ 0.65
LIME1-208ENST00000493265 CACNB1Q02641 598 aaPredicted RBP19.1■□□□□ 0.65
LIME1-208ENST00000493265 EMC2Q15006 297 aa19.1■□□□□ 0.65
LIME1-208ENST00000493265 PTGISQ16647 500 aa19.1■□□□□ 0.65
LIME1-208ENST00000493265 MARCH8Q5T0T0 291 aa19.1■□□□□ 0.65
LIME1-208ENST00000493265 RINT1Q6NUQ1 792 aa19.1■□□□□ 0.65
LIME1-208ENST00000493265 MTHFD1LQ6UB35 978 aa19.1■□□□□ 0.65
LIME1-208ENST00000493265 DYMQ7RTS9 669 aa19.1■□□□□ 0.65
LIME1-208ENST00000493265 SLC7A3Q8WY07 619 aa19.1■□□□□ 0.65
LIME1-208ENST00000493265 PAGE5Q96GU1 130 aa19.1■□□□□ 0.65
LIME1-208ENST00000493265 GUCD1Q96NT3 240 aa19.1■□□□□ 0.65
LIME1-208ENST00000493265 FAM49AQ9H0Q0 323 aaPredicted RBP19.1■□□□□ 0.65
LIME1-208ENST00000493265 TRPV6Q9H1D0 765 aa19.1■□□□□ 0.65
LIME1-208ENST00000493265 ATP6V0A4Q9HBG4 840 aa19.1■□□□□ 0.65
LIME1-208ENST00000493265 MYMKA6NI61 221 aa19.09■□□□□ 0.65
LIME1-208ENST00000493265 PQBP1O60828 265 aaKnown RBP19.09■□□□□ 0.65
LIME1-208ENST00000493265 MAFO75444 373 aaPredicted RBP19.09■□□□□ 0.65
LIME1-208ENST00000493265 CYP2C9P11712 490 aa19.09■□□□□ 0.65
LIME1-208ENST00000493265 CYP11B2P19099 503 aa19.09■□□□□ 0.65
LIME1-208ENST00000493265 RFC5P40937 340 aa19.09■□□□□ 0.65
LIME1-208ENST00000493265 CLCN3P51790 818 aa19.09■□□□□ 0.65
LIME1-208ENST00000493265 NFKBIBQ15653 356 aa19.09■□□□□ 0.65
LIME1-208ENST00000493265 FAM102BQ5T8I3 360 aa19.09■□□□□ 0.65
LIME1-208ENST00000493265 EFCAB12Q6NXP0 572 aa19.09■□□□□ 0.65
LIME1-208ENST00000493265 RUFY4Q6ZNE9 571 aa19.09■□□□□ 0.65
LIME1-208ENST00000493265 TMEM143Q96AN5 459 aa19.09■□□□□ 0.65
LIME1-208ENST00000493265 CEP89Q96ST8 783 aa19.09■□□□□ 0.65
LIME1-208ENST00000493265 MTRQ99707 1265 aa19.09■□□□□ 0.65
LIME1-208ENST00000493265 BLZF1Q9H2G9 400 aa19.09■□□□□ 0.65
LIME1-208ENST00000493265 MAGEB2O15479 319 aa19.08■□□□□ 0.64
LIME1-208ENST00000493265 DGAT1O75907 488 aa19.08■□□□□ 0.64
LIME1-208ENST00000493265 MBD3O95983 291 aa19.08■□□□□ 0.64
LIME1-208ENST00000493265 PTPN11Q06124 597 aaPredicted RBP19.08■□□□□ 0.64
LIME1-208ENST00000493265 CAMK4Q16566 473 aa19.08■□□□□ 0.64
LIME1-208ENST00000493265 TRIM60Q495X7 471 aa19.08■□□□□ 0.64
LIME1-208ENST00000493265 ARSHQ5FYA8 562 aa19.08■□□□□ 0.64
LIME1-208ENST00000493265 C1orf186Q6ZWK4 172 aa19.08■□□□□ 0.64
LIME1-208ENST00000493265 SESTD1Q86VW0 696 aa19.08■□□□□ 0.64
LIME1-208ENST00000493265 SLC43A3Q8NBI5 491 aa19.08■□□□□ 0.64
LIME1-208ENST00000493265 RETREG2Q8NC44 543 aa19.08■□□□□ 0.64
LIME1-208ENST00000493265 TNMDQ9H2S6 317 aa19.08■□□□□ 0.64
LIME1-208ENST00000493265 ZHX3Q9H4I2 956 aa19.08■□□□□ 0.64
LIME1-208ENST00000493265 DHX33Q9H6R0 707 aaKnown RBP19.08■□□□□ 0.64
LIME1-208ENST00000493265 MAGEF1Q9HAY2 307 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms