RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 KLHDC7AQ5VTJ3 777 aa11.04□□□□□ -0.64
BRD9-209ENST00000490814 ADAT2Q7Z6V5 191 aaKnown RBP11.04□□□□□ -0.64
BRD9-209ENST00000490814 SDCCAG8Q86SQ7 713 aaPredicted RBP11.04□□□□□ -0.64
BRD9-209ENST00000490814 WDR66Q8TBY9 1149 aa11.04□□□□□ -0.64
BRD9-209ENST00000490814 C17orf50Q8WW18 174 aa11.04□□□□□ -0.64
BRD9-209ENST00000490814 SEPT11Q9NVA2 429 aaKnown RBP11.04□□□□□ -0.64
BRD9-209ENST00000490814 SUN2Q9UH99 717 aa11.04□□□□□ -0.64
BRD9-209ENST00000490814 KIAA1024Q9UPX6 916 aa11.04□□□□□ -0.64
BRD9-209ENST00000490814 COL4A3BPQ9Y5P4 624 aa11.04□□□□□ -0.64
BRD9-209ENST00000490814 E9PMD0 336 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 FKBP3Q00688 224 aaKnown RBP11.03□□□□□ -0.64
BRD9-209ENST00000490814 ASIC2Q16515 512 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 MTHFD1LQ6UB35 978 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 TTLL6Q8N841 843 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 SEC16BQ96JE7 1060 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 DNAAF2Q9NVR5 837 aaKnown RBP11.03□□□□□ -0.64
BRD9-209ENST00000490814 PIM2Q9P1W9 311 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 MYH3P11055 1940 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 UFL1O94874 794 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 ACTN1P12814 892 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 GSTO1P78417 241 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 SPRED3Q2MJR0 410 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 ZSCAN29Q8IWY8 852 aaPredicted RBP11.03□□□□□ -0.64
BRD9-209ENST00000490814 GUF1Q8N442 669 aaKnown RBP11.03□□□□□ -0.64
BRD9-209ENST00000490814 STAMBPL1Q96FJ0 436 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 PNMA5Q96PV4 448 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 PURBQ96QR8 312 aaKnown RBP11.03□□□□□ -0.64
BRD9-209ENST00000490814 OSBPL7Q9BZF2 842 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 ZNF277Q9NRM2 450 aaPredicted RBP11.03□□□□□ -0.64
BRD9-209ENST00000490814 TIAM2Q8IVF5 1701 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 DDX60Q8IY21 1712 aaKnown RBP11.03□□□□□ -0.64
BRD9-209ENST00000490814 CICQ96RK0 1608 aaPredicted RBP11.03□□□□□ -0.64
BRD9-209ENST00000490814 A0A087X0T9 212 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 SMIM23A6NLE4 172 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 FAM228BP0C875 321 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 TNNC1P63316 161 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 CCDC15Q0P6D6 951 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 COASYQ13057 564 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 RPS6KA1Q15418 735 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 KRT71Q3SY84 523 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 GLE1Q53GS7 698 aaKnown RBP11.03□□□□□ -0.64
BRD9-209ENST00000490814 GKAP1Q5VSY0 366 aaPredicted RBP11.03□□□□□ -0.64
BRD9-209ENST00000490814 ZNF662Q6ZS27 426 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 GPBP1Q86WP2 473 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 RAD54LQ92698 747 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 HVCN1Q96D96 273 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 PCDHA12Q9UN75 941 aa11.03□□□□□ -0.64
BRD9-209ENST00000490814 NUP98P52948 1817 aa11.02□□□□□ -0.64
BRD9-209ENST00000490814 TLDC2A0PJX2 215 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 M0R2N6 131 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 RAD51CO43502 376 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 LINGO3P0C6S8 592 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 PRLRP16471 622 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 NAT1P18440 290 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 LRRC63Q05C16 580 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 IKQ13123 557 aaPredicted RBP11.02□□□□□ -0.65
BRD9-209ENST00000490814 ITGB3BPQ13352 177 aaPredicted RBP11.02□□□□□ -0.65
BRD9-209ENST00000490814 ADAM9Q13443 819 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 SLMAPQ14BN4 828 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 DALRD3Q5D0E6 543 aaKnown RBP11.02□□□□□ -0.65
BRD9-209ENST00000490814 RBM26Q5T8P6 1007 aaKnown RBP11.02□□□□□ -0.65
BRD9-209ENST00000490814 DPP8Q6V1X1 898 aaPredicted RBP11.02□□□□□ -0.65
BRD9-209ENST00000490814 SYCP3Q8IZU3 236 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 DDX25Q9UHL0 483 aaKnown RBP11.02□□□□□ -0.65
BRD9-209ENST00000490814 GJA3Q9Y6H8 435 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 A0A1B0GVG6 124 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 MEIS1O00470 390 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 SCTRP47872 440 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 FIGNQ5HY92 759 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 PPP4R3AQ6IN85 833 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 DAGLBQ8NCG7 672 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 WHAMMQ8TF30 809 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 CUL5Q93034 780 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 FGFBP2Q9BYJ0 223 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 DBNDD1Q9H9R9 158 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 STK17AQ9UEE5 414 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 LEMD3Q9Y2U8 911 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 C15orf41Q9Y2V0 281 aa11.02□□□□□ -0.65
BRD9-209ENST00000490814 SERPING1P05155 500 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 CDK17Q00537 523 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 ITIH3Q06033 890 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 ANKRD20A8PQ5CZ79 823 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 ZNF804AQ7Z570 1209 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 BAP1Q92560 729 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 RUBCNQ92622 972 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 SELENOSQ9BQE4 189 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 TRIM7Q9C029 511 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 DPH5Q9H2P9 285 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 HSD17B3P37058 310 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 STAT3P40763 770 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 MAGOHP61326 146 aaKnown RBP11.01□□□□□ -0.65
BRD9-209ENST00000490814 KCNMA1Q12791 1236 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 MPP3Q13368 585 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 KCTD1Q719H9 257 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 CCDC65Q8IXS2 484 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 GALNT15Q8N3T1 639 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 MDM1Q8TC05 714 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 MAGOHBQ96A72 148 aaKnown RBP11.01□□□□□ -0.65
BRD9-209ENST00000490814 SPZ1Q9BXG8 430 aa11.01□□□□□ -0.65
BRD9-209ENST00000490814 ZC3H12CQ9C0D7 883 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms