RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 CDH22Q9UJ99 828 aa15.91■□□□□ 0.14
VARS-227ENST00000489979 SLC12A7Q9Y666 1083 aa15.91■□□□□ 0.14
VARS-227ENST00000489979 COL1A2P08123 1366 aa15.9■□□□□ 0.14
VARS-227ENST00000489979 MYH9P35579 1960 aaKnown RBP15.9■□□□□ 0.14
VARS-227ENST00000489979 ZBTB42B2RXF5 422 aa15.9■□□□□ 0.14
VARS-227ENST00000489979 MEIS1O00470 390 aa15.9■□□□□ 0.14
VARS-227ENST00000489979 HOXB8P17481 243 aaPredicted RBP15.9■□□□□ 0.14
VARS-227ENST00000489979 LIFRP42702 1097 aa15.9■□□□□ 0.14
VARS-227ENST00000489979 CRYBB1P53674 252 aaPredicted RBP15.9■□□□□ 0.14
VARS-227ENST00000489979 ZNF484Q5JVG2 852 aa15.9■□□□□ 0.14
VARS-227ENST00000489979 WWC2Q6AWC2 1192 aa15.9■□□□□ 0.14
VARS-227ENST00000489979 TYW1BQ6NUM6 668 aa15.9■□□□□ 0.14
VARS-227ENST00000489979 LRRC55Q6ZSA7 311 aa15.9■□□□□ 0.14
VARS-227ENST00000489979 CCDC60Q8IWA6 550 aaPredicted RBP15.9■□□□□ 0.14
VARS-227ENST00000489979 FANCBQ8NB91 859 aa15.9■□□□□ 0.14
VARS-227ENST00000489979 KREMEN2Q8NCW0 462 aa15.9■□□□□ 0.14
VARS-227ENST00000489979 CASD1Q96PB1 797 aa15.9■□□□□ 0.14
VARS-227ENST00000489979 LRRC2Q9BYS8 371 aa15.9■□□□□ 0.14
VARS-227ENST00000489979 ANO3Q9BYT9 981 aa15.9■□□□□ 0.14
VARS-227ENST00000489979 TMEM117Q9H0C3 514 aa15.9■□□□□ 0.14
VARS-227ENST00000489979 ELAC1Q9H777 363 aaKnown RBP15.9■□□□□ 0.14
VARS-227ENST00000489979 NGRNQ9NPE2 291 aaKnown RBP15.9■□□□□ 0.14
VARS-227ENST00000489979 RIC8AQ9NPQ8 531 aa15.9■□□□□ 0.14
VARS-227ENST00000489979 ZNF302Q9NR11 478 aa15.9■□□□□ 0.14
VARS-227ENST00000489979 NR2E1Q9Y466 385 aa15.9■□□□□ 0.14
VARS-227ENST00000489979 GPR32O75388 356 aa15.89■□□□□ 0.13
VARS-227ENST00000489979 VTNP04004 478 aa15.89■□□□□ 0.13
VARS-227ENST00000489979 PBX3P40426 434 aa15.89■□□□□ 0.13
VARS-227ENST00000489979 NUBP1P53384 320 aa15.89■□□□□ 0.13
VARS-227ENST00000489979 NAPAP54920 295 aa15.89■□□□□ 0.13
VARS-227ENST00000489979 DSC3Q14574 896 aa15.89■□□□□ 0.13
VARS-227ENST00000489979 PDXDC2PQ6P474 469 aa15.89■□□□□ 0.13
VARS-227ENST00000489979 KCNT2Q6UVM3 1135 aa15.89■□□□□ 0.13
VARS-227ENST00000489979 MICU3Q86XE3 530 aa15.89■□□□□ 0.13
VARS-227ENST00000489979 RNF19AQ9NV58 838 aa15.89■□□□□ 0.13
VARS-227ENST00000489979 SPTBN4Q9H254 2564 aa15.88■□□□□ 0.13
VARS-227ENST00000489979 GALR2O43603 387 aaPredicted RBP15.88■□□□□ 0.13
VARS-227ENST00000489979 C22orf31O95567 290 aa15.88■□□□□ 0.13
VARS-227ENST00000489979 FOSP01100 380 aaPredicted RBP15.88■□□□□ 0.13
VARS-227ENST00000489979 ATP4AP20648 1035 aa15.88■□□□□ 0.13
VARS-227ENST00000489979 ZNF76P36508 570 aa15.88■□□□□ 0.13
VARS-227ENST00000489979 KRT17Q04695 432 aa15.88■□□□□ 0.13
VARS-227ENST00000489979 SWSAP1Q6NVH7 229 aa15.88■□□□□ 0.13
VARS-227ENST00000489979 MIS18BP1Q6P0N0 1132 aa15.88■□□□□ 0.13
VARS-227ENST00000489979 TMC7Q7Z402 723 aa15.88■□□□□ 0.13
VARS-227ENST00000489979 METTL13Q8N6R0 699 aa15.88■□□□□ 0.13
VARS-227ENST00000489979 CASP10Q92851 521 aa15.88■□□□□ 0.13
VARS-227ENST00000489979 ZNF558Q96NG5 402 aa15.88■□□□□ 0.13
VARS-227ENST00000489979 POMKQ9H5K3 350 aa15.88■□□□□ 0.13
VARS-227ENST00000489979 SORCS3Q9UPU3 1222 aa15.88■□□□□ 0.13
VARS-227ENST00000489979 CNTNAP5Q8WYK1 1306 aa15.88■□□□□ 0.13
VARS-227ENST00000489979 RIF1Q5UIP0 2472 aaKnown RBP15.88■□□□□ 0.13
VARS-227ENST00000489979 C2CD4DB7Z1M9 353 aa15.87■□□□□ 0.13
VARS-227ENST00000489979 PROB1E7EW31 1015 aa15.87■□□□□ 0.13
VARS-227ENST00000489979 HOXA2O43364 376 aa15.87■□□□□ 0.13
VARS-227ENST00000489979 BRD1O95696 1058 aa15.87■□□□□ 0.13
VARS-227ENST00000489979 PPM1AP35813 382 aa15.87■□□□□ 0.13
VARS-227ENST00000489979 SREBF1P36956 1147 aa15.87■□□□□ 0.13
VARS-227ENST00000489979 ADCY7P51828 1080 aa15.87■□□□□ 0.13
VARS-227ENST00000489979 MTMR3Q13615 1198 aa15.87■□□□□ 0.13
VARS-227ENST00000489979 TPRNQ4KMQ1 711 aa15.87■□□□□ 0.13
VARS-227ENST00000489979 CES5AQ6NT32 575 aa15.87■□□□□ 0.13
VARS-227ENST00000489979 ASCL5Q7RTU5 278 aa15.87■□□□□ 0.13
VARS-227ENST00000489979 TRMT1LQ7Z2T5 733 aaKnown RBP15.87■□□□□ 0.13
VARS-227ENST00000489979 PLA2G4DQ86XP0 818 aa15.87■□□□□ 0.13
VARS-227ENST00000489979 CKAP2LQ8IYA6 745 aa15.87■□□□□ 0.13
VARS-227ENST00000489979 UBALD2Q8IYN6 164 aa15.87■□□□□ 0.13
VARS-227ENST00000489979 LRRC43Q8N309 656 aa15.87■□□□□ 0.13
VARS-227ENST00000489979 SPG21Q9NZD8 308 aa15.87■□□□□ 0.13
VARS-227ENST00000489979 HCFC2Q9Y5Z7 792 aa15.87■□□□□ 0.13
VARS-227ENST00000489979 FAM186AA6NE01 2351 aa15.86■□□□□ 0.13
VARS-227ENST00000489979 SMCO2A6NFE2 343 aa15.86■□□□□ 0.13
VARS-227ENST00000489979 FAM86B1E9PN63 330 aa15.86■□□□□ 0.13
VARS-227ENST00000489979 SLC27A2O14975 620 aa15.86■□□□□ 0.13
VARS-227ENST00000489979 DHX15O43143 795 aaKnown RBP15.86■□□□□ 0.13
VARS-227ENST00000489979 FAM86B2P0C5J1 330 aa15.86■□□□□ 0.13
VARS-227ENST00000489979 SMC1AQ14683 1233 aaKnown RBP15.86■□□□□ 0.13
VARS-227ENST00000489979 PPP1R18Q6NYC8 613 aa15.86■□□□□ 0.13
VARS-227ENST00000489979 NIPA1Q7RTP0 329 aa15.86■□□□□ 0.13
VARS-227ENST00000489979 TEX2Q8IWB9 1127 aa15.86■□□□□ 0.13
VARS-227ENST00000489979 ABI1Q8IZP0 508 aa15.86■□□□□ 0.13
VARS-227ENST00000489979 TMEM105Q8N8V8 129 aa15.86■□□□□ 0.13
VARS-227ENST00000489979 BBXQ8WY36 941 aaPredicted RBP15.86■□□□□ 0.13
VARS-227ENST00000489979 NECTIN4Q96NY8 510 aa15.86■□□□□ 0.13
VARS-227ENST00000489979 ADAM7Q9H2U9 754 aa15.86■□□□□ 0.13
VARS-227ENST00000489979 SMOC2Q9H3U7 446 aa15.86■□□□□ 0.13
VARS-227ENST00000489979 C2orf71A6NGG8 1288 aa15.85■□□□□ 0.13
VARS-227ENST00000489979 CLASP2O75122 1294 aaKnown RBP15.85■□□□□ 0.13
VARS-227ENST00000489979 WEE2P0C1S8 567 aa15.85■□□□□ 0.13
VARS-227ENST00000489979 ZSCAN20P17040 1043 aaPredicted RBP15.85■□□□□ 0.13
VARS-227ENST00000489979 CLCN3P51790 818 aa15.85■□□□□ 0.13
VARS-227ENST00000489979 NLRP11P59045 1033 aaKnown RBP15.85■□□□□ 0.13
VARS-227ENST00000489979 ITIH3Q06033 890 aa15.85■□□□□ 0.13
VARS-227ENST00000489979 AP3B2Q13367 1082 aa15.85■□□□□ 0.13
VARS-227ENST00000489979 SYNE3Q6ZMZ3 975 aa15.85■□□□□ 0.13
VARS-227ENST00000489979 SGMS1Q86VZ5 419 aa15.85■□□□□ 0.13
VARS-227ENST00000489979 ECHDC2Q86YB7 292 aa15.85■□□□□ 0.13
VARS-227ENST00000489979 SLC39A11Q8N1S5 342 aa15.85■□□□□ 0.13
VARS-227ENST00000489979 MRPL43Q8N983 215 aaKnown RBP15.85■□□□□ 0.13
VARS-227ENST00000489979 RNF169Q8NCN4 708 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms