RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 C9orf50Q5SZB4 431 aa10.25□□□□□ -0.77
TNRC6B-208ENST00000489500 ARHGEF16Q5VV41 709 aa10.25□□□□□ -0.77
TNRC6B-208ENST00000489500 FAM126BQ8IXS8 530 aa10.25□□□□□ -0.77
TNRC6B-208ENST00000489500 ADGRF4Q8IZF3 695 aa10.25□□□□□ -0.77
TNRC6B-208ENST00000489500 RGL4Q8IZJ4 473 aa10.25□□□□□ -0.77
TNRC6B-208ENST00000489500 ENAHQ8N8S7 591 aaPredicted RBP10.25□□□□□ -0.77
TNRC6B-208ENST00000489500 NCOA7Q8NI08 942 aa10.25□□□□□ -0.77
TNRC6B-208ENST00000489500 MTG1Q9BT17 334 aaPredicted RBP10.25□□□□□ -0.77
TNRC6B-208ENST00000489500 AMNQ9BXJ7 453 aa10.25□□□□□ -0.77
TNRC6B-208ENST00000489500 HIPK3Q9H422 1215 aa10.25□□□□□ -0.77
TNRC6B-208ENST00000489500 VAT1LQ9HCJ6 419 aa10.25□□□□□ -0.77
TNRC6B-208ENST00000489500 C11orf16Q9NQ32 467 aa10.25□□□□□ -0.77
TNRC6B-208ENST00000489500 PDGFCQ9NRA1 345 aa10.25□□□□□ -0.77
TNRC6B-208ENST00000489500 TBX21Q9UL17 535 aa10.25□□□□□ -0.77
TNRC6B-208ENST00000489500 RBM47A0AV96 593 aaKnown RBP10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 KLRF2D3W0D1 207 aa10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 IFIT3O14879 490 aaKnown RBP10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 ADCY6O43306 1168 aa10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 FGBP02675 491 aa10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 PFKMP08237 780 aa10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 TXNP10599 105 aaKnown RBP10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 GPLD1P80108 840 aa10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 PTPN11Q06124 597 aaPredicted RBP10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 OCLNQ16625 522 aa10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 FOXD4L6Q3SYB3 417 aaPredicted RBP10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 FAM47CQ5HY64 1035 aa10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 KCNV1Q6PIU1 500 aa10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 ELMSAN1Q6PJG2 1045 aa10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 FOXD4L3Q6VB84 417 aaPredicted RBP10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 SLC30A10Q6XR72 485 aa10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 RASGRP2Q7LDG7 609 aa10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 CMTR1Q8N1G2 835 aaKnown RBP10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 SLC43A3Q8NBI5 491 aa10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 RETREG2Q8NC44 543 aa10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 STK32AQ8WU08 396 aa10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 CLEC4DQ8WXI8 215 aa10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 FAM161BQ96MY7 647 aa10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 SAP130Q9H0E3 1048 aa10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 IL23AQ9NPF7 189 aa10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.24□□□□□ -0.773e-6■■■■■ 84.6
TNRC6B-208ENST00000489500 MSRAQ9UJ68 235 aa10.24□□□□□ -0.77
TNRC6B-208ENST00000489500 CTAGE5O15320 804 aa10.23□□□□□ -0.77
TNRC6B-208ENST00000489500 GH1P01241 217 aa10.23□□□□□ -0.77
TNRC6B-208ENST00000489500 CD4P01730 458 aa10.23□□□□□ -0.77
TNRC6B-208ENST00000489500 ACTN1P12814 892 aa10.23□□□□□ -0.77
TNRC6B-208ENST00000489500 CSF2RAP15509 400 aa10.23□□□□□ -0.77
TNRC6B-208ENST00000489500 CASTP20810 708 aaKnown RBP10.23□□□□□ -0.77
TNRC6B-208ENST00000489500 WTAPQ15007 396 aa10.23□□□□□ -0.77
TNRC6B-208ENST00000489500 RAB30Q15771 203 aa10.23□□□□□ -0.77
TNRC6B-208ENST00000489500 SWI5Q1ZZU3 235 aa10.23□□□□□ -0.77
TNRC6B-208ENST00000489500 CASC1Q6TDU7 716 aa10.23□□□□□ -0.77
TNRC6B-208ENST00000489500 CATIPQ7Z7H3 387 aa10.23□□□□□ -0.77
TNRC6B-208ENST00000489500 TMTC2Q8N394 836 aa10.23□□□□□ -0.77
TNRC6B-208ENST00000489500 RMDN3Q96TC7 470 aa10.23□□□□□ -0.77
TNRC6B-208ENST00000489500 FRRS1LQ9P0K9 344 aa10.23□□□□□ -0.77
TNRC6B-208ENST00000489500 RANBP2P49792 3224 aaKnown RBP10.22□□□□□ -0.77
TNRC6B-208ENST00000489500 DLL1O00548 723 aa10.22□□□□□ -0.77
TNRC6B-208ENST00000489500 ZBTB5O15062 677 aa10.22□□□□□ -0.77
TNRC6B-208ENST00000489500 XYLBO75191 536 aa10.22□□□□□ -0.77
TNRC6B-208ENST00000489500 EIF3JO75822 258 aaKnown RBP10.22□□□□□ -0.77
TNRC6B-208ENST00000489500 CFBP00751 764 aa10.22□□□□□ -0.77
TNRC6B-208ENST00000489500 EDNRBP24530 442 aa10.22□□□□□ -0.77
TNRC6B-208ENST00000489500 ITGB8P26012 769 aa10.22□□□□□ -0.77
TNRC6B-208ENST00000489500 CHMLP26374 656 aa10.22□□□□□ -0.77
TNRC6B-208ENST00000489500 KIF5BP33176 963 aa10.22□□□□□ -0.77
TNRC6B-208ENST00000489500 RFC2P35250 354 aa10.22□□□□□ -0.77
TNRC6B-208ENST00000489500 PURAQ00577 322 aaKnown RBP10.22□□□□□ -0.77
TNRC6B-208ENST00000489500 BFSP2Q13515 415 aa10.22□□□□□ -0.77
TNRC6B-208ENST00000489500 QRICH1Q2TAL8 776 aa10.22□□□□□ -0.77
TNRC6B-208ENST00000489500 FAM26DQ5JW98 314 aa10.22□□□□□ -0.77
TNRC6B-208ENST00000489500 NFRKBQ6P4R8 1299 aa10.22□□□□□ -0.77
TNRC6B-208ENST00000489500 CAPN12Q6ZSI9 719 aa10.22□□□□□ -0.77
TNRC6B-208ENST00000489500 ETFBKMTQ8IXQ9 262 aa10.22□□□□□ -0.77
TNRC6B-208ENST00000489500 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.22□□□□□ -0.772e-26■■■□□ 16.8
TNRC6B-208ENST00000489500 KATNAL1Q9BW62 490 aa10.22□□□□□ -0.77
TNRC6B-208ENST00000489500 KCNMB2Q9Y691 235 aa10.22□□□□□ -0.77
TNRC6B-208ENST00000489500 ASTN1O14525 1302 aa10.22□□□□□ -0.77
TNRC6B-208ENST00000489500 MYO9BQ13459 2157 aa10.22□□□□□ -0.77
TNRC6B-208ENST00000489500 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 B4GALT4O60513 344 aa10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 PARNO95453 639 aaKnown RBP10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 FOSL2P15408 326 aa10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 CYP2C18P33260 490 aa10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 GNAQP50148 359 aa10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 PSMC6P62333 389 aa10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 ELOAQ14241 798 aaKnown RBP10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 DGKDQ16760 1214 aa10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 TMEM67Q5HYA8 995 aa10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 TMEM240Q5SV17 173 aa10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 SEPT14Q6ZU15 432 aa10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 ZNF365Q70YC5 407 aa10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 CTCFLQ8NI51 663 aaPredicted RBP10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 SYTL5Q8TDW5 730 aaPredicted RBP10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 HERVK_113Q902F9 699 aa10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 CUL5Q93034 780 aa10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 TIFAQ96CG3 184 aa10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 CDX2Q99626 313 aaPredicted RBP10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 LZTS2Q9BRK4 669 aa10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 MTA3Q9BTC8 594 aa10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 SMG9Q9H0W8 520 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms