RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, human

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD46-215	ENST00000488596	PLA2G12B	Q9BX93	195 aa		4.62	□□□□□ -1.67
CD46-215	ENST00000488596	MTFR1L	Q9H019	292 aa		4.62	□□□□□ -1.67
CD46-215	ENST00000488596	IKZF4	Q9H2S9	585 aa		4.62	□□□□□ -1.67
CD46-215	ENST00000488596	NR2E1	Q9Y466	385 aa		4.62	□□□□□ -1.67
CD46-215	ENST00000488596	GSG1L2	A8MUP6	293 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	KPNA6	O60684	536 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	AMY2A	P04746	511 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	AMY2B	P19961	511 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	IL13RA1	P78552	427 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	WDR72	Q3MJ13	1102 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	CFAP100	Q494V2	611 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	ZMAT1	Q5H9K5	638 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	PIK3R6	Q5UE93	754 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.61	□□□□□ -1.67
CD46-215	ENST00000488596	ARHGAP36	Q6ZRI8	547 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	OSTM1	Q86WC4	334 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	THNSL2	Q86YJ6	484 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	LEO1	Q8WVC0	666 aa	Predicted RBP	4.61	□□□□□ -1.67
CD46-215	ENST00000488596	CFHR4	Q92496	578 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	FBXW5	Q969U6	566 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	CEP89	Q96ST8	783 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	FAM126A	Q9BYI3	521 aa	Predicted RBP	4.61	□□□□□ -1.67
CD46-215	ENST00000488596	TRIM8	Q9BZR9	551 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	ZDHHC5	Q9C0B5	715 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	C12orf65	Q9H3J6	166 aa	Known RBP	4.61	□□□□□ -1.67
CD46-215	ENST00000488596	CATSPERZ	Q9NTU4	200 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	INTS7	Q9NVH2	962 aa	Known RBP	4.61	□□□□□ -1.67
CD46-215	ENST00000488596	RIC8B	Q9NVN3	520 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	SAMD15	Q9P1V8	674 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	ARHGAP28	Q9P2N2	729 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	CBLC	Q9ULV8	474 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	PRKAB1	Q9Y478	270 aa		4.61	□□□□□ -1.67
CD46-215	ENST00000488596	CCDC66	A2RUB6	948 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596		M0R2C6	588 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	KCNK3	O14649	394 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	GLRX3	O76003	335 aa	Known RBP	4.6	□□□□□ -1.67
CD46-215	ENST00000488596	APP	P05067	770 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	NAT1	P18440	290 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	CNGA1	P29973	690 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	MCM7	P33993	719 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	ADCY8	P40145	1251 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	ETV4	P43268	484 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	KCNQ1	P51787	676 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	INHBE	P58166	350 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	ST5	P78524	1137 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	DPT	Q07507	201 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	FOXL1	Q12952	345 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	NFYC	Q13952	458 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	PTPRO	Q16827	1216 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	FNDC7	Q5VTL7	733 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	UBE2R2	Q712K3	238 aa	Predicted RBP	4.6	□□□□□ -1.67
CD46-215	ENST00000488596	C16orf59	Q7L2K0	433 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	ZNF808	Q8N4W9	903 aa	Predicted RBP	4.6	□□□□□ -1.67
CD46-215	ENST00000488596	CISD2	Q8N5K1	135 aa	Known RBP	4.6	□□□□□ -1.67
CD46-215	ENST00000488596	AMER2	Q8N7J2	671 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	FAM89A	Q96GI7	184 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	WNK4	Q96J92	1243 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	SCYL1	Q96KG9	808 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	PLEKHG4B	Q96PX9	1271 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	KIAA1683	Q9H0B3	1180 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	SRPK3	Q9UPE1	567 aa		4.6	□□□□□ -1.67
CD46-215	ENST00000488596	WDR33	Q9C0J8	1336 aa	Known RBP	4.6	□□□□□ -1.67
CD46-215	ENST00000488596	MAN2B1	O00754	1011 aa		4.59	□□□□□ -1.67
CD46-215	ENST00000488596	ARHGAP6	O43182	974 aa		4.59	□□□□□ -1.67
CD46-215	ENST00000488596	HMGCR	P04035	888 aa		4.59	□□□□□ -1.67
CD46-215	ENST00000488596	PDE6A	P16499	860 aa		4.59	□□□□□ -1.67
CD46-215	ENST00000488596	KRT15	P19012	456 aa		4.59	□□□□□ -1.67
CD46-215	ENST00000488596	PTGS1	P23219	599 aa		4.59	□□□□□ -1.67
CD46-215	ENST00000488596	ACRV1	P26436	265 aa		4.59	□□□□□ -1.67
CD46-215	ENST00000488596	FLT3	P36888	993 aa		4.59	□□□□□ -1.67
CD46-215	ENST00000488596	STAT3	P40763	770 aa		4.59	□□□□□ -1.67
CD46-215	ENST00000488596	JAM2	P57087	298 aa		4.59	□□□□□ -1.67
CD46-215	ENST00000488596	GPR19	Q15760	415 aa		4.59	□□□□□ -1.67
CD46-215	ENST00000488596	OVCH1	Q7RTY7	1134 aa		4.59	□□□□□ -1.67
CD46-215	ENST00000488596	STRA8	Q7Z7C7	330 aa		4.59	□□□□□ -1.67
CD46-215	ENST00000488596	RNF180	Q86T96	592 aa		4.59	□□□□□ -1.67
CD46-215	ENST00000488596	DDX53	Q86TM3	631 aa	Known RBP	4.59	□□□□□ -1.67
CD46-215	ENST00000488596	NLGN4X	Q8N0W4	816 aa		4.59	□□□□□ -1.67
CD46-215	ENST00000488596	NXPE1	Q8N323	547 aa		4.59	□□□□□ -1.67
CD46-215	ENST00000488596	CACTIN	Q8WUQ7	758 aa	Known RBP	4.59	□□□□□ -1.67
CD46-215	ENST00000488596	CHAC2	Q8WUX2	184 aa		4.59	□□□□□ -1.67
CD46-215	ENST00000488596	NEU4	Q8WWR8	484 aa	Predicted RBP	4.59	□□□□□ -1.67
CD46-215	ENST00000488596	CAAP1	Q9H8G2	361 aa		4.59	□□□□□ -1.67
CD46-215	ENST00000488596	GALNT8	Q9NY28	637 aa		4.59	□□□□□ -1.67
CD46-215	ENST00000488596	PUF60	Q9UHX1	559 aa	Known RBP	4.59	□□□□□ -1.67
CD46-215	ENST00000488596	CDC42EP3	Q9UKI2	254 aa		4.59	□□□□□ -1.67
CD46-215	ENST00000488596		B4E1Z4	1266 aa		4.58	□□□□□ -1.68
CD46-215	ENST00000488596	TRAF5	O00463	557 aa		4.58	□□□□□ -1.68
CD46-215	ENST00000488596	WNT9A	O14904	365 aa		4.58	□□□□□ -1.68
CD46-215	ENST00000488596	POU3F2	P20265	443 aa	Predicted RBP	4.58	□□□□□ -1.68
CD46-215	ENST00000488596	HIBADH	P31937	336 aa	Known RBP	4.58	□□□□□ -1.68
CD46-215	ENST00000488596	MC4R	P32245	332 aa		4.58	□□□□□ -1.68
CD46-215	ENST00000488596	MSX2	P35548	267 aa	Predicted RBP	4.58	□□□□□ -1.68
CD46-215	ENST00000488596	RPS19	P39019	145 aa	Known RBP	4.58	□□□□□ -1.68
CD46-215	ENST00000488596	AMPD3	Q01432	767 aa		4.58	□□□□□ -1.68
CD46-215	ENST00000488596	SEPT7	Q16181	437 aa	Known RBP	4.58	□□□□□ -1.68
CD46-215	ENST00000488596	CRY1	Q16526	586 aa		4.58	□□□□□ -1.68
CD46-215	ENST00000488596	TMEM177	Q53S58	311 aa		4.58	□□□□□ -1.68
CD46-215	ENST00000488596	FAM47C	Q5HY64	1035 aa		4.58	□□□□□ -1.68
CD46-215	ENST00000488596	USP30	Q70CQ3	517 aa		4.58	□□□□□ -1.68

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