RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 NFX1Q12986 1120 aaKnown RBP26.02■■□□□ 1.76
CUL4A-209ENST00000488558 ME3Q16798 604 aa26.02■■□□□ 1.76
CUL4A-209ENST00000488558 KIZQ2M2Z5 673 aa26.02■■□□□ 1.76
CUL4A-209ENST00000488558 LETM2Q2VYF4 491 aa26.02■■□□□ 1.76
CUL4A-209ENST00000488558 TRMT1LQ7Z2T5 733 aaKnown RBP26.02■■□□□ 1.76
CUL4A-209ENST00000488558 FAM20AQ96MK3 541 aa26.02■■□□□ 1.76
CUL4A-209ENST00000488558 OSMRQ99650 979 aa26.02■■□□□ 1.76
CUL4A-209ENST00000488558 C11orf84Q9BUA3 381 aaPredicted RBP26.02■■□□□ 1.76
CUL4A-209ENST00000488558 KCNMB3Q9NPA1 279 aa26.02■■□□□ 1.76
CUL4A-209ENST00000488558 C1orf112Q9NSG2 853 aa26.02■■□□□ 1.76
CUL4A-209ENST00000488558 TNFRSF10AO00220 468 aa26.01■■□□□ 1.75
CUL4A-209ENST00000488558 SLC37A4O43826 429 aa26.01■■□□□ 1.75
CUL4A-209ENST00000488558 VTNP04004 478 aa26.01■■□□□ 1.75
CUL4A-209ENST00000488558 SARSP49591 514 aaKnown RBP26.01■■□□□ 1.75
CUL4A-209ENST00000488558 CLCN3P51790 818 aa26.01■■□□□ 1.75
CUL4A-209ENST00000488558 TARBP2Q15633 366 aaKnown RBP26.01■■□□□ 1.75
CUL4A-209ENST00000488558 ATG2AQ2TAZ0 1938 aa26.01■■□□□ 1.75
CUL4A-209ENST00000488558 XKR3Q5GH77 459 aa26.01■■□□□ 1.75
CUL4A-209ENST00000488558 EFCAB12Q6NXP0 572 aa26.01■■□□□ 1.75
CUL4A-209ENST00000488558 PLVAPQ9BX97 442 aa26.01■■□□□ 1.75
CUL4A-209ENST00000488558 NIFKQ9BYG3 293 aaKnown RBP26.01■■□□□ 1.75
CUL4A-209ENST00000488558 LMAN2LQ9H0V9 348 aa26.01■■□□□ 1.75
CUL4A-209ENST00000488558 RGS18Q9NS28 235 aa26.01■■□□□ 1.75
CUL4A-209ENST00000488558 ST3GAL5Q9UNP4 418 aa26.01■■□□□ 1.75
CUL4A-209ENST00000488558 TBX3O15119 743 aa26■■□□□ 1.75
CUL4A-209ENST00000488558 LARGE1O95461 756 aa26■■□□□ 1.75
CUL4A-209ENST00000488558 FDPSP14324 419 aaKnown RBP26■■□□□ 1.75
CUL4A-209ENST00000488558 NEK4P51957 841 aa26■■□□□ 1.75
CUL4A-209ENST00000488558 PPP2R5CQ13362 524 aa26■■□□□ 1.75
CUL4A-209ENST00000488558 FAM228AQ86W67 206 aa26■■□□□ 1.75
CUL4A-209ENST00000488558 UHRF1Q96T88 793 aaPredicted RBP26■■□□□ 1.75
CUL4A-209ENST00000488558 GJB4Q9NTQ9 266 aa26■■□□□ 1.75
CUL4A-209ENST00000488558 AKT3Q9Y243 479 aa26■■□□□ 1.75
CUL4A-209ENST00000488558 MGEA5O60502 916 aa25.99■■□□□ 1.75
CUL4A-209ENST00000488558 KCNQ1P51787 676 aa25.99■■□□□ 1.75
CUL4A-209ENST00000488558 TBC1D8BQ0IIM8 1120 aa25.99■■□□□ 1.75
CUL4A-209ENST00000488558 PIK3AP1Q6ZUJ8 805 aa25.99■■□□□ 1.75
CUL4A-209ENST00000488558 NECAB1Q8N987 351 aa25.99■■□□□ 1.75
CUL4A-209ENST00000488558 NSUN7Q8NE18 718 aaKnown RBP25.99■■□□□ 1.75
CUL4A-209ENST00000488558 OXER1Q8TDS5 423 aa25.99■■□□□ 1.75
CUL4A-209ENST00000488558 BRMS1Q9HCU9 246 aa25.99■■□□□ 1.75
CUL4A-209ENST00000488558 VAV3Q9UKW4 847 aa25.99■■□□□ 1.75
CUL4A-209ENST00000488558 LRFN2Q9ULH4 789 aa25.99■■□□□ 1.75
CUL4A-209ENST00000488558 DENND3A2RUS2 1198 aa25.98■■□□□ 1.75
CUL4A-209ENST00000488558 STBD1O95210 358 aa25.98■■□□□ 1.75
CUL4A-209ENST00000488558 KRT2P35908 639 aa25.98■■□□□ 1.75
CUL4A-209ENST00000488558 NLRP11P59045 1033 aaKnown RBP25.98■■□□□ 1.75
CUL4A-209ENST00000488558 SLC24A5Q71RS6 500 aa25.98■■□□□ 1.75
CUL4A-209ENST00000488558 LRRC71Q8N4P6 559 aa25.98■■□□□ 1.75
CUL4A-209ENST00000488558 BANK1Q8NDB2 785 aa25.98■■□□□ 1.75
CUL4A-209ENST00000488558 P2RX5Q93086 422 aa25.98■■□□□ 1.75
CUL4A-209ENST00000488558 PPP1R16BQ96T49 567 aa25.98■■□□□ 1.75
CUL4A-209ENST00000488558 ADAM2Q99965 735 aa25.98■■□□□ 1.75
CUL4A-209ENST00000488558 ADAMTS10Q9H324 1103 aa25.98■■□□□ 1.75
CUL4A-209ENST00000488558 UBE2ZQ9H832 354 aaPredicted RBP25.98■■□□□ 1.75
CUL4A-209ENST00000488558 SEPT9Q9UHD8 586 aaPredicted RBP25.98■■□□□ 1.75
CUL4A-209ENST00000488558 MRPL42Q9Y6G3 142 aaKnown RBP25.98■■□□□ 1.75
CUL4A-209ENST00000488558 FNDC1Q4ZHG4 1894 aaPredicted RBP25.98■■□□□ 1.75
CUL4A-209ENST00000488558 BRWD1Q9NSI6 2320 aa25.97■■□□□ 1.75
CUL4A-209ENST00000488558 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.97■■□□□ 1.75
CUL4A-209ENST00000488558 C9IYK1 514 aa25.97■■□□□ 1.75
CUL4A-209ENST00000488558 SEC24BO95487 1268 aa25.97■■□□□ 1.75
CUL4A-209ENST00000488558 PSMC5P62195 406 aa25.97■■□□□ 1.75
CUL4A-209ENST00000488558 NAALADL2Q58DX5 795 aa25.97■■□□□ 1.75
CUL4A-209ENST00000488558 TNFRSF25Q93038 417 aa25.97■■□□□ 1.75
CUL4A-209ENST00000488558 CEP89Q96ST8 783 aa25.97■■□□□ 1.75
CUL4A-209ENST00000488558 NSUN3Q9H649 340 aaKnown RBP25.97■■□□□ 1.75
CUL4A-209ENST00000488558 TCF20Q9UGU0 1960 aaKnown RBP25.96■■□□□ 1.75
CUL4A-209ENST00000488558 IGKV6-21A0A0C4DH24 114 aa25.96■■□□□ 1.75
CUL4A-209ENST00000488558 CCNT1O60563 726 aaKnown RBP25.96■■□□□ 1.75
CUL4A-209ENST00000488558 EIF4BP23588 611 aaKnown RBP25.96■■□□□ 1.75
CUL4A-209ENST00000488558 GPC3P51654 580 aa25.96■■□□□ 1.75
CUL4A-209ENST00000488558 CDC42EP1Q00587 391 aa25.96■■□□□ 1.75
CUL4A-209ENST00000488558 DSC3Q14574 896 aa25.96■■□□□ 1.75
CUL4A-209ENST00000488558 ELAC1Q9H777 363 aaKnown RBP25.96■■□□□ 1.75
CUL4A-209ENST00000488558 PCDHB7Q9Y5E2 793 aa25.96■■□□□ 1.75
CUL4A-209ENST00000488558 NCOR1O75376 2440 aa25.96■■□□□ 1.75
CUL4A-209ENST00000488558 MUC3AQ02505 3323 aa25.96■■□□□ 1.75
CUL4A-209ENST00000488558 BDP1A6H8Y1 2624 aa25.95■■□□□ 1.74
CUL4A-209ENST00000488558 DKC1O60832 514 aaKnown RBP eCLIP25.95■■□□□ 1.742e-6■■■□□ 19.1
CUL4A-209ENST00000488558 COL19A1Q14993 1142 aa25.95■■□□□ 1.74
CUL4A-209ENST00000488558 MTERF2Q49AM1 385 aa25.95■■□□□ 1.74
CUL4A-209ENST00000488558 TMEM161AQ9NX61 479 aa25.95■■□□□ 1.74
CUL4A-209ENST00000488558 DTNBO60941 627 aa25.94■■□□□ 1.74
CUL4A-209ENST00000488558 MMP1P03956 469 aa25.94■■□□□ 1.74
CUL4A-209ENST00000488558 FAM189BP81408 668 aa25.94■■□□□ 1.74
CUL4A-209ENST00000488558 NR5A1Q13285 461 aa25.94■■□□□ 1.74
CUL4A-209ENST00000488558 EARS2Q5JPH6 523 aaKnown RBP25.94■■□□□ 1.74
CUL4A-209ENST00000488558 SLFN12Q8IYM2 578 aa25.94■■□□□ 1.74
CUL4A-209ENST00000488558 HAS1Q92839 578 aa25.94■■□□□ 1.74
CUL4A-209ENST00000488558 PPME1Q9Y570 386 aa25.94■■□□□ 1.74
CUL4A-209ENST00000488558 EML1O00423 815 aa25.93■■□□□ 1.74
CUL4A-209ENST00000488558 GRM6O15303 877 aa25.93■■□□□ 1.74
CUL4A-209ENST00000488558 DARSP14868 501 aaKnown RBP25.93■■□□□ 1.74
CUL4A-209ENST00000488558 QARSP47897 775 aaKnown RBP25.93■■□□□ 1.74
CUL4A-209ENST00000488558 LEXMQ3ZCV2 418 aa25.93■■□□□ 1.74
CUL4A-209ENST00000488558 PAN2Q504Q3 1202 aaKnown RBP25.93■■□□□ 1.74
CUL4A-209ENST00000488558 TCEAL5Q5H9L2 206 aa25.93■■□□□ 1.74
CUL4A-209ENST00000488558 ANO5Q75V66 913 aa25.93■■□□□ 1.74
CUL4A-209ENST00000488558 POTEDQ86YR6 584 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms