RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 RIT2Q99578 217 aa17.33■□□□□ 0.36
TRIM50-203ENST00000488217 OSMRQ99650 979 aa17.33■□□□□ 0.36
TRIM50-203ENST00000488217 UPF3BQ9BZI7 483 aaKnown RBP17.33■□□□□ 0.36
TRIM50-203ENST00000488217 ATP6V0A4Q9HBG4 840 aa17.33■□□□□ 0.36
TRIM50-203ENST00000488217 SH3GLB2Q9NR46 395 aa17.33■□□□□ 0.36
TRIM50-203ENST00000488217 DISC1Q9NRI5 854 aa17.33■□□□□ 0.36
TRIM50-203ENST00000488217 VPS54Q9P1Q0 977 aa17.33■□□□□ 0.36
TRIM50-203ENST00000488217 HCN4Q9Y3Q4 1203 aa17.33■□□□□ 0.36
TRIM50-203ENST00000488217 DOCK5Q9H7D0 1870 aa17.33■□□□□ 0.36
TRIM50-203ENST00000488217 TBKBP1A7MCY6 615 aa17.32■□□□□ 0.36
TRIM50-203ENST00000488217 WDR64B1ANS9 1081 aa17.32■□□□□ 0.36
TRIM50-203ENST00000488217 MSH4O15457 936 aa17.32■□□□□ 0.36
TRIM50-203ENST00000488217 LINC01565O15544 149 aa17.32■□□□□ 0.36
TRIM50-203ENST00000488217 MBTPS2O43462 519 aa17.32■□□□□ 0.36
TRIM50-203ENST00000488217 IRS1P35568 1242 aa17.32■□□□□ 0.36
TRIM50-203ENST00000488217 NLRP11P59045 1033 aaKnown RBP17.32■□□□□ 0.36
TRIM50-203ENST00000488217 SPOUT1Q5T280 376 aaKnown RBP17.32■□□□□ 0.36
TRIM50-203ENST00000488217 RUFY3Q7L099 469 aa17.32■□□□□ 0.36
TRIM50-203ENST00000488217 FAM228AQ86W67 206 aa17.32■□□□□ 0.36
TRIM50-203ENST00000488217 FAM167AQ96KS9 214 aa17.32■□□□□ 0.36
TRIM50-203ENST00000488217 PPP1R16BQ96T49 567 aa17.32■□□□□ 0.36
TRIM50-203ENST00000488217 ELAC1Q9H777 363 aaKnown RBP17.32■□□□□ 0.36
TRIM50-203ENST00000488217 NCOA5Q9HCD5 579 aaKnown RBP17.32■□□□□ 0.36
TRIM50-203ENST00000488217 ZSWIM6Q9HCJ5 1215 aa17.32■□□□□ 0.36
TRIM50-203ENST00000488217 TYW1Q9NV66 732 aaKnown RBP17.32■□□□□ 0.36
TRIM50-203ENST00000488217 NID2Q14112 1375 aa17.31■□□□□ 0.36
TRIM50-203ENST00000488217 SIP14410 1827 aa17.31■□□□□ 0.36
TRIM50-203ENST00000488217 PRR33A8MZF0 331 aa17.31■□□□□ 0.36
TRIM50-203ENST00000488217 DCXO43602 365 aa17.31■□□□□ 0.36
TRIM50-203ENST00000488217 UBE3AQ05086 875 aa17.31■□□□□ 0.36
TRIM50-203ENST00000488217 SSRP1Q08945 709 aaKnown RBP17.31■□□□□ 0.36
TRIM50-203ENST00000488217 DSC3Q14574 896 aa17.31■□□□□ 0.36
TRIM50-203ENST00000488217 ADGRD2Q7Z7M1 963 aa17.31■□□□□ 0.36
TRIM50-203ENST00000488217 RBM23Q86U06 439 aaKnown RBP17.31■□□□□ 0.36
TRIM50-203ENST00000488217 EFHBQ8N7U6 833 aa17.31■□□□□ 0.36
TRIM50-203ENST00000488217 SLC5A5Q92911 643 aa17.31■□□□□ 0.36
TRIM50-203ENST00000488217 ADAMTS10Q9H324 1103 aa17.31■□□□□ 0.36
TRIM50-203ENST00000488217 TLE6Q9H808 572 aa17.31■□□□□ 0.36
TRIM50-203ENST00000488217 TMEM161AQ9NX61 479 aa17.31■□□□□ 0.36
TRIM50-203ENST00000488217 CD207Q9UJ71 328 aa17.31■□□□□ 0.36
TRIM50-203ENST00000488217 TTC3P53804 2025 aa17.3■□□□□ 0.36
TRIM50-203ENST00000488217 KAT6AQ92794 2004 aa17.3■□□□□ 0.36
TRIM50-203ENST00000488217 COL4A4P53420 1690 aaPredicted RBP17.3■□□□□ 0.36
TRIM50-203ENST00000488217 EPB41L2O43491 1005 aaKnown RBP17.3■□□□□ 0.36
TRIM50-203ENST00000488217 ZNF862O60290 1169 aa17.3■□□□□ 0.36
TRIM50-203ENST00000488217 TBX10O75333 385 aa17.3■□□□□ 0.36
TRIM50-203ENST00000488217 EYA4O95677 639 aa17.3■□□□□ 0.36
TRIM50-203ENST00000488217 ZSCAN20P17040 1043 aaPredicted RBP17.3■□□□□ 0.36
TRIM50-203ENST00000488217 EIF4BP23588 611 aaKnown RBP17.3■□□□□ 0.36
TRIM50-203ENST00000488217 SFNP31947 248 aa17.3■□□□□ 0.36
TRIM50-203ENST00000488217 NRIP1P48552 1158 aa17.3■□□□□ 0.36
TRIM50-203ENST00000488217 SMAD4Q13485 552 aaKnown RBP17.3■□□□□ 0.36
TRIM50-203ENST00000488217 TRIM22Q8IYM9 498 aa17.3■□□□□ 0.36
TRIM50-203ENST00000488217 ZNF274Q96GC6 653 aaPredicted RBP17.3■□□□□ 0.36
TRIM50-203ENST00000488217 MSLNLQ96KJ4 702 aa17.3■□□□□ 0.36
TRIM50-203ENST00000488217 MAP7D2Q96T17 732 aa17.3■□□□□ 0.36
TRIM50-203ENST00000488217 C22orf23Q9BZE7 217 aa17.3■□□□□ 0.36
TRIM50-203ENST00000488217 CLEC1BQ9P126 229 aa17.3■□□□□ 0.36
TRIM50-203ENST00000488217 PCDHA4Q9UN74 947 aa17.3■□□□□ 0.36
TRIM50-203ENST00000488217 AKT3Q9Y243 479 aa17.3■□□□□ 0.36
TRIM50-203ENST00000488217 CYP46A1Q9Y6A2 500 aa17.3■□□□□ 0.36
TRIM50-203ENST00000488217 CYP3A7-CYP3A51PA0A087WV96 503 aa17.29■□□□□ 0.36
TRIM50-203ENST00000488217 GAS7O60861 476 aa17.29■□□□□ 0.36
TRIM50-203ENST00000488217 FGF18O76093 207 aa17.29■□□□□ 0.36
TRIM50-203ENST00000488217 OATP04181 439 aa17.29■□□□□ 0.36
TRIM50-203ENST00000488217 CYP3A7P24462 503 aa17.29■□□□□ 0.36
TRIM50-203ENST00000488217 NDUFV1P49821 464 aa17.29■□□□□ 0.36
TRIM50-203ENST00000488217 CLCN3P51790 818 aa17.29■□□□□ 0.36
TRIM50-203ENST00000488217 TOB2Q14106 344 aaPredicted RBP17.29■□□□□ 0.36
TRIM50-203ENST00000488217 CSPP1Q1MSJ5 1256 aa17.29■□□□□ 0.36
TRIM50-203ENST00000488217 Q4G0T1 1027 aa17.29■□□□□ 0.36
TRIM50-203ENST00000488217 LRRC71Q8N4P6 559 aa17.29■□□□□ 0.36
TRIM50-203ENST00000488217 LINC01465Q8N7H1 131 aa17.29■□□□□ 0.36
TRIM50-203ENST00000488217 TBCKQ8TEA7 893 aa17.29■□□□□ 0.36
TRIM50-203ENST00000488217 POP1Q99575 1024 aaKnown RBP17.29■□□□□ 0.36
TRIM50-203ENST00000488217 TEKT3Q9BXF9 490 aa17.29■□□□□ 0.36
TRIM50-203ENST00000488217 PER2O15055 1255 aa17.28■□□□□ 0.36
TRIM50-203ENST00000488217 FGFR1P11362 822 aa17.28■□□□□ 0.36
TRIM50-203ENST00000488217 JAK3P52333 1124 aa17.28■□□□□ 0.36
TRIM50-203ENST00000488217 ERVFC1P60507 584 aa17.28■□□□□ 0.36
TRIM50-203ENST00000488217 CDC42EP1Q00587 391 aa17.28■□□□□ 0.36
TRIM50-203ENST00000488217 COASYQ13057 564 aa17.28■□□□□ 0.36
TRIM50-203ENST00000488217 LRCH2Q5VUJ6 765 aa17.28■□□□□ 0.36
TRIM50-203ENST00000488217 PDE12Q6L8Q7 609 aaKnown RBP17.28■□□□□ 0.36
TRIM50-203ENST00000488217 GJA10Q969M2 543 aa17.28■□□□□ 0.36
TRIM50-203ENST00000488217 LARP6Q9BRS8 491 aaKnown RBP17.28■□□□□ 0.36
TRIM50-203ENST00000488217 NIFKQ9BYG3 293 aaKnown RBP17.28■□□□□ 0.36
TRIM50-203ENST00000488217 TMEM117Q9H0C3 514 aa17.28■□□□□ 0.36
TRIM50-203ENST00000488217 UNC45AQ9H3U1 944 aa17.28■□□□□ 0.36
TRIM50-203ENST00000488217 CWH43Q9H720 699 aa17.28■□□□□ 0.36
TRIM50-203ENST00000488217 PUF60Q9UHX1 559 aaKnown RBP17.28■□□□□ 0.36
TRIM50-203ENST00000488217 BRWD1Q9NSI6 2320 aa17.27■□□□□ 0.36
TRIM50-203ENST00000488217 CPLX1O14810 134 aa17.27■□□□□ 0.36
TRIM50-203ENST00000488217 HOXA2O43364 376 aa17.27■□□□□ 0.36
TRIM50-203ENST00000488217 CHMP2AO43633 222 aa17.27■□□□□ 0.36
TRIM50-203ENST00000488217 PSMD10O75832 226 aa17.27■□□□□ 0.36
TRIM50-203ENST00000488217 DEXIO95424 95 aa17.27■□□□□ 0.36
TRIM50-203ENST00000488217 TARBP2Q15633 366 aaKnown RBP17.27■□□□□ 0.36
TRIM50-203ENST00000488217 GALNT17Q6IS24 598 aa17.27■□□□□ 0.36
TRIM50-203ENST00000488217 LRRC55Q6ZSA7 311 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms