RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 AKAP3O75969 853 aa13.13□□□□□ -0.31
PKP4-213ENST00000486254 NOL4O94818 638 aa13.13□□□□□ -0.31
PKP4-213ENST00000486254 MYCLP12524 364 aaPredicted RBP13.13□□□□□ -0.31
PKP4-213ENST00000486254 VAV2P52735 878 aa13.13□□□□□ -0.31
PKP4-213ENST00000486254 ENPEPQ07075 957 aa13.13□□□□□ -0.31
PKP4-213ENST00000486254 PPIL2Q13356 520 aa13.13□□□□□ -0.31
PKP4-213ENST00000486254 CACNA2D4Q7Z3S7 1137 aa13.13□□□□□ -0.31
PKP4-213ENST00000486254 SLC35C1Q96A29 364 aa13.13□□□□□ -0.31
PKP4-213ENST00000486254 CCDC42Q96M95 316 aa13.13□□□□□ -0.31
PKP4-213ENST00000486254 SYT17Q9BSW7 474 aa13.13□□□□□ -0.31
PKP4-213ENST00000486254 GANQ9H2C0 597 aa13.13□□□□□ -0.31
PKP4-213ENST00000486254 AIPL1Q9NZN9 384 aa13.13□□□□□ -0.31
PKP4-213ENST00000486254 LRRC37A2A6NM11 1700 aa13.13□□□□□ -0.31
PKP4-213ENST00000486254 ANO9A1A5B4 782 aa13.12□□□□□ -0.31
PKP4-213ENST00000486254 CTAGE9A4FU28 777 aa13.12□□□□□ -0.31
PKP4-213ENST00000486254 LRRC53A6NM62 1247 aa13.12□□□□□ -0.31
PKP4-213ENST00000486254 ATP9AO75110 1047 aa13.12□□□□□ -0.31
PKP4-213ENST00000486254 EIF3JO75822 258 aaKnown RBP13.12□□□□□ -0.31
PKP4-213ENST00000486254 RGS20O76081 388 aa13.12□□□□□ -0.31
PKP4-213ENST00000486254 RFX1P22670 979 aa13.12□□□□□ -0.31
PKP4-213ENST00000486254 EDNRBP24530 442 aa13.12□□□□□ -0.31
PKP4-213ENST00000486254 HERVK_113P62684 666 aa13.12□□□□□ -0.31
PKP4-213ENST00000486254 GTF2BQ00403 316 aa13.12□□□□□ -0.31
PKP4-213ENST00000486254 SPA17Q15506 151 aa13.12□□□□□ -0.31
PKP4-213ENST00000486254 ASTE1Q2TB18 679 aaPredicted RBP13.12□□□□□ -0.31
PKP4-213ENST00000486254 DPY19L2Q6NUT2 758 aa13.12□□□□□ -0.31
PKP4-213ENST00000486254 OTUD6AQ7L8S5 288 aa13.12□□□□□ -0.31
PKP4-213ENST00000486254 ZNF710Q8N1W2 664 aa13.12□□□□□ -0.31
PKP4-213ENST00000486254 SPIRE2Q8WWL2 714 aa13.12□□□□□ -0.31
PKP4-213ENST00000486254 CCDC43Q96MW1 224 aaKnown RBP13.12□□□□□ -0.31
PKP4-213ENST00000486254 JPH1Q9HDC5 661 aaPredicted RBP13.12□□□□□ -0.31
PKP4-213ENST00000486254 LUC7LQ9NQ29 371 aaKnown RBP13.12□□□□□ -0.31
PKP4-213ENST00000486254 LZTFL1Q9NQ48 299 aa13.12□□□□□ -0.31
PKP4-213ENST00000486254 AGPAT3Q9NRZ7 376 aa13.12□□□□□ -0.31
PKP4-213ENST00000486254 ARHGAP20Q9P2F6 1191 aa13.12□□□□□ -0.31
PKP4-213ENST00000486254 SAMM50Q9Y512 469 aa13.12□□□□□ -0.31
PKP4-213ENST00000486254 BZW2Q9Y6E2 419 aaKnown RBP13.12□□□□□ -0.31
PKP4-213ENST00000486254 IGSF9BQ9UPX0 1349 aa13.12□□□□□ -0.31
PKP4-213ENST00000486254 DDX39AO00148 427 aaKnown RBP13.11□□□□□ -0.31
PKP4-213ENST00000486254 ZBTB39O15060 712 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 PMM2O15305 246 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 PJA2O43164 708 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 TADA3O75528 432 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 URI1O94763 535 aaPredicted RBP13.11□□□□□ -0.31
PKP4-213ENST00000486254 SLC25A27O95847 323 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 SERPING1P05155 500 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 PSAPP07602 524 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 NMT1P30419 496 aaKnown RBP13.11□□□□□ -0.31
PKP4-213ENST00000486254 NCKAP1LP55160 1127 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 STXBP2Q15833 593 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 SLC9C1Q4G0N8 1177 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 DPY19L2P1Q6NXN4 242 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 GBP6Q6ZN66 633 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 FAM186BQ8IYM0 893 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 SMCR8Q8TEV9 937 aaPredicted RBP13.11□□□□□ -0.31
PKP4-213ENST00000486254 GTF3C2Q8WUA4 911 aaPredicted RBP13.11□□□□□ -0.31
PKP4-213ENST00000486254 KIFAP3Q92845 792 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 NAPGQ99747 312 aaPredicted RBP13.11□□□□□ -0.31
PKP4-213ENST00000486254 NTPCRQ9BSD7 190 aaKnown RBP13.11□□□□□ -0.31
PKP4-213ENST00000486254 CDC23Q9UJX2 597 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 AGTPBP1Q9UPW5 1226 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 PPME1Q9Y570 386 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 MYH9P35579 1960 aaKnown RBP13.11□□□□□ -0.31
PKP4-213ENST00000486254 H0YCG3 227 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 P4HA2O15460 535 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 USO1O60763 962 aaKnown RBP13.11□□□□□ -0.31
PKP4-213ENST00000486254 ATG7O95352 703 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 PRKCIP41743 596 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 KIF11P52732 1056 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 EXOC3L4Q17RC7 722 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 SFMBT2Q5VUG0 894 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 C9orf131Q5VYM1 1079 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 HGSNATQ68CP4 663 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 RRAGAQ7L523 313 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 MCPH1Q8NEM0 835 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 VTI1AQ96AJ9 217 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 ACCSQ96QU6 501 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 LSM14BQ9BX40 385 aaKnown RBP13.11□□□□□ -0.31
PKP4-213ENST00000486254 SLC9A2Q9UBY0 812 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 FRMD4BQ9Y2L6 1034 aa13.11□□□□□ -0.31
PKP4-213ENST00000486254 ADM5C9JUS6 153 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 K7ENM7 598 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 N4BP1O75113 896 aaKnown RBP13.1□□□□□ -0.31
PKP4-213ENST00000486254 DGAT1O75907 488 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 GFPT2O94808 682 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 STBD1O95210 358 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 TGFB3P10600 412 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 YBX3P16989 372 aaKnown RBP eCLIP13.1□□□□□ -0.311e-8■□□□□ 9
PKP4-213ENST00000486254 C1QBPQ07021 282 aaKnown RBP13.1□□□□□ -0.31
PKP4-213ENST00000486254 KCNA1Q09470 495 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 KIF5AQ12840 1032 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 UGCGQ16739 394 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 WHAMMP3Q1A5X7 153 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 ZNF569Q5MCW4 686 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 TREML2Q5T2D2 321 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 C10orf76Q5T2E6 689 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 ABHD15Q6UXT9 468 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 INTS8Q75QN2 995 aaKnown RBP13.1□□□□□ -0.31
PKP4-213ENST00000486254 KIAA1328Q86T90 577 aa13.1□□□□□ -0.31
PKP4-213ENST00000486254 PDCL2Q8N4E4 241 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms