RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 H3BNC9 293 aa20.7■□□□□ 0.9
PRPF40A-209ENST00000486100 EML1O00423 815 aa20.7■□□□□ 0.9
PRPF40A-209ENST00000486100 MARCH6O60337 910 aa20.7■□□□□ 0.9
PRPF40A-209ENST00000486100 MMP1P03956 469 aa20.7■□□□□ 0.9
PRPF40A-209ENST00000486100 NLRP11P59045 1033 aaKnown RBP20.7■□□□□ 0.9
PRPF40A-209ENST00000486100 PSMC5P62195 406 aa20.7■□□□□ 0.9
PRPF40A-209ENST00000486100 TBC1D8BQ0IIM8 1120 aa20.7■□□□□ 0.9
PRPF40A-209ENST00000486100 ST3GAL1Q11201 340 aa20.7■□□□□ 0.9
PRPF40A-209ENST00000486100 TRIM29Q14134 588 aa20.7■□□□□ 0.9
PRPF40A-209ENST00000486100 HAS1Q92839 578 aa20.7■□□□□ 0.9
PRPF40A-209ENST00000486100 ADAMTS10Q9H324 1103 aa20.7■□□□□ 0.9
PRPF40A-209ENST00000486100 VAV3Q9UKW4 847 aa20.7■□□□□ 0.9
PRPF40A-209ENST00000486100 COG5Q9UP83 839 aa20.7■□□□□ 0.9
PRPF40A-209ENST00000486100 ADGRA3Q8IWK6 1321 aa20.7■□□□□ 0.9
PRPF40A-209ENST00000486100 FAM205CA6NFA0 338 aa20.69■□□□□ 0.9
PRPF40A-209ENST00000486100 BTBD18B2RXH4 712 aa20.69■□□□□ 0.9
PRPF40A-209ENST00000486100 MGEA5O60502 916 aa20.69■□□□□ 0.9
PRPF40A-209ENST00000486100 RB1P06400 928 aa20.69■□□□□ 0.9
PRPF40A-209ENST00000486100 BMPR1AP36894 532 aa20.69■□□□□ 0.9
PRPF40A-209ENST00000486100 GPM6BQ13491 265 aa20.69■□□□□ 0.9
PRPF40A-209ENST00000486100 BTG3Q14201 252 aaPredicted RBP20.69■□□□□ 0.9
PRPF40A-209ENST00000486100 BANK1Q8NDB2 785 aa20.69■□□□□ 0.9
PRPF40A-209ENST00000486100 CLP1Q92989 425 aaKnown RBP20.69■□□□□ 0.9
PRPF40A-209ENST00000486100 CEP89Q96ST8 783 aa20.69■□□□□ 0.9
PRPF40A-209ENST00000486100 KIF2CQ99661 725 aa20.69■□□□□ 0.9
PRPF40A-209ENST00000486100 RGS18Q9NS28 235 aa20.69■□□□□ 0.9
PRPF40A-209ENST00000486100 SEPT9Q9UHD8 586 aaPredicted RBP20.69■□□□□ 0.9
PRPF40A-209ENST00000486100 RWDD3Q9Y3V2 267 aa20.69■□□□□ 0.9
PRPF40A-209ENST00000486100 COL4A6Q14031 1691 aa20.69■□□□□ 0.9
PRPF40A-209ENST00000486100 SIP14410 1827 aa20.69■□□□□ 0.9
PRPF40A-209ENST00000486100 PRRC2BQ5JSZ5 2229 aaKnown RBP20.68■□□□□ 0.9
PRPF40A-209ENST00000486100 DENND3A2RUS2 1198 aa20.68■□□□□ 0.9
PRPF40A-209ENST00000486100 DDX11L8A8MPP1 907 aa20.68■□□□□ 0.9
PRPF40A-209ENST00000486100 C5orf67F2Z3F1 127 aa20.68■□□□□ 0.9
PRPF40A-209ENST00000486100 BAG4O95429 457 aaKnown RBP20.68■□□□□ 0.9
PRPF40A-209ENST00000486100 LINC00271P0C7V0 271 aa20.68■□□□□ 0.9
PRPF40A-209ENST00000486100 QARSP47897 775 aaKnown RBP20.68■□□□□ 0.9
PRPF40A-209ENST00000486100 SARSP49591 514 aaKnown RBP20.68■□□□□ 0.9
PRPF40A-209ENST00000486100 PTPROQ16827 1216 aa20.68■□□□□ 0.9
PRPF40A-209ENST00000486100 AAK1Q2M2I8 961 aa20.68■□□□□ 0.9
PRPF40A-209ENST00000486100 MTERF2Q49AM1 385 aa20.68■□□□□ 0.9
PRPF40A-209ENST00000486100 SLC24A5Q71RS6 500 aa20.68■□□□□ 0.9
PRPF40A-209ENST00000486100 FAM228AQ86W67 206 aa20.68■□□□□ 0.9
PRPF40A-209ENST00000486100 POTEDQ86YR6 584 aa20.68■□□□□ 0.9
PRPF40A-209ENST00000486100 DIS3L2Q8IYB7 885 aaKnown RBP20.68■□□□□ 0.9
PRPF40A-209ENST00000486100 SLFN12Q8IYM2 578 aa20.68■□□□□ 0.9
PRPF40A-209ENST00000486100 MRPL38Q96DV4 380 aaKnown RBP20.68■□□□□ 0.9
PRPF40A-209ENST00000486100 ZSCAN31Q96LW9 406 aaPredicted RBP20.68■□□□□ 0.9
PRPF40A-209ENST00000486100 ADAM2Q99965 735 aa20.68■□□□□ 0.9
PRPF40A-209ENST00000486100 C1orf112Q9NSG2 853 aa20.68■□□□□ 0.9
PRPF40A-209ENST00000486100 RNF216Q9NWF9 866 aaPredicted RBP20.68■□□□□ 0.9
PRPF40A-209ENST00000486100 LRFN2Q9ULH4 789 aa20.68■□□□□ 0.9
PRPF40A-209ENST00000486100 IGKV6-21A0A0C4DH24 114 aa20.67■□□□□ 0.9
PRPF40A-209ENST00000486100 DKC1O60832 514 aaKnown RBP eCLIP20.67■□□□□ 0.9
PRPF40A-209ENST00000486100 P4HBP07237 508 aaKnown RBP20.67■□□□□ 0.9
PRPF40A-209ENST00000486100 EIF4BP23588 611 aaKnown RBP20.67■□□□□ 0.9
PRPF40A-209ENST00000486100 CDC42EP1Q00587 391 aa20.67■□□□□ 0.9
PRPF40A-209ENST00000486100 EPHA7Q15375 998 aa20.67■□□□□ 0.9
PRPF40A-209ENST00000486100 ANO5Q75V66 913 aa20.67■□□□□ 0.9
PRPF40A-209ENST00000486100 CCDC83Q8IWF9 413 aa20.67■□□□□ 0.9
PRPF40A-209ENST00000486100 CMTR2Q8IYT2 770 aaKnown RBP20.67■□□□□ 0.9
PRPF40A-209ENST00000486100 HLA-CQ95604 372 aa20.67■□□□□ 0.9
PRPF40A-209ENST00000486100 LLPHQ9BRT6 129 aaKnown RBP20.67■□□□□ 0.9
PRPF40A-209ENST00000486100 PCDHB7Q9Y5E2 793 aa20.67■□□□□ 0.9
PRPF40A-209ENST00000486100 TMEM150BA6NC51 233 aa20.66■□□□□ 0.9
PRPF40A-209ENST00000486100 C9IYK1 514 aa20.66■□□□□ 0.9
PRPF40A-209ENST00000486100 CTNNB1P35222 781 aa20.66■□□□□ 0.9
PRPF40A-209ENST00000486100 DNM2P50570 870 aa20.66■□□□□ 0.9
PRPF40A-209ENST00000486100 GPC3P51654 580 aa20.66■□□□□ 0.9
PRPF40A-209ENST00000486100 FOSBP53539 338 aa20.66■□□□□ 0.9
PRPF40A-209ENST00000486100 FAM189BP81408 668 aa20.66■□□□□ 0.9
PRPF40A-209ENST00000486100 TFF2Q03403 129 aa20.66■□□□□ 0.9
PRPF40A-209ENST00000486100 SH2D3AQ9BRG2 576 aa20.66■□□□□ 0.9
PRPF40A-209ENST00000486100 TTC3P53804 2025 aa20.65■□□□□ 0.9
PRPF40A-209ENST00000486100 MAFO75444 373 aaPredicted RBP20.65■□□□□ 0.9
PRPF40A-209ENST00000486100 RBM25P49756 843 aaKnown RBP20.65■□□□□ 0.9
PRPF40A-209ENST00000486100 DRP2Q13474 957 aa20.65■□□□□ 0.9
PRPF40A-209ENST00000486100 DSC3Q14574 896 aa20.65■□□□□ 0.9
PRPF40A-209ENST00000486100 IL27Q8NEV9 243 aa20.65■□□□□ 0.9
PRPF40A-209ENST00000486100 ZNF668Q96K58 619 aaPredicted RBP20.65■□□□□ 0.9
PRPF40A-209ENST00000486100 JPH2Q9BR39 696 aaPredicted RBP20.65■□□□□ 0.9
PRPF40A-209ENST00000486100 C11orf84Q9BUA3 381 aaPredicted RBP20.65■□□□□ 0.9
PRPF40A-209ENST00000486100 PLVAPQ9BX97 442 aa20.65■□□□□ 0.9
PRPF40A-209ENST00000486100 SH2B1Q9NRF2 756 aaPredicted RBP20.65■□□□□ 0.9
PRPF40A-209ENST00000486100 MYH9P35579 1960 aaKnown RBP20.65■□□□□ 0.9
PRPF40A-209ENST00000486100 BMP1P13497 986 aa20.64■□□□□ 0.89
PRPF40A-209ENST00000486100 DARSP14868 501 aaKnown RBP20.64■□□□□ 0.89
PRPF40A-209ENST00000486100 SPIRE1Q08AE8 756 aa20.64■□□□□ 0.89
PRPF40A-209ENST00000486100 SAFBQ15424 915 aaKnown RBP eCLIP20.64■□□□□ 0.89
PRPF40A-209ENST00000486100 NCAPH2Q6IBW4 605 aa20.64■□□□□ 0.89
PRPF40A-209ENST00000486100 C4orf19Q8IY42 314 aa20.64■□□□□ 0.89
PRPF40A-209ENST00000486100 NLRP7Q8WX94 980 aa20.64■□□□□ 0.89
PRPF40A-209ENST00000486100 ELAC1Q9H777 363 aaKnown RBP20.64■□□□□ 0.89
PRPF40A-209ENST00000486100 CYP26B1Q9NR63 512 aa20.64■□□□□ 0.89
PRPF40A-209ENST00000486100 PPME1Q9Y570 386 aa20.64■□□□□ 0.89
PRPF40A-209ENST00000486100 MRPL42Q9Y6G3 142 aaKnown RBP20.64■□□□□ 0.89
PRPF40A-209ENST00000486100 VCANP13611 3396 aa20.63■□□□□ 0.89
PRPF40A-209ENST00000486100 ZSCAN20P17040 1043 aaPredicted RBP20.63■□□□□ 0.89
PRPF40A-209ENST00000486100 IBSPP21815 317 aaPredicted RBP20.63■□□□□ 0.89
PRPF40A-209ENST00000486100 CALCRLQ16602 461 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms